Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
VCPP55072 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
VCPP55072 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
VCPP55072 MIR372-201ENST00000362225 67 ntBASIC4.8□□□□□ -1.64
VCPP55072 RNU6-819P-201ENST00000364116 107 ntBASIC4.8□□□□□ -1.64
VCPP55072 RNU6-670P-201ENST00000364312 104 ntBASIC4.8□□□□□ -1.64
VCPP55072 SNORA71.2-201ENST00000364941 134 ntBASIC4.8□□□□□ -1.64
VCPP55072 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
VCPP55072 MIR659-201ENST00000384963 97 ntBASIC4.8□□□□□ -1.64
VCPP55072 AC004448.2-201ENST00000422360 586 ntBASIC4.8□□□□□ -1.64
VCPP55072 OR6K4P-201ENST00000423179 955 ntBASIC4.8□□□□□ -1.64
VCPP55072 AJ239321.1-201ENST00000424255 564 ntBASIC4.8□□□□□ -1.64
VCPP55072 MAPRE1P3-201ENST00000435438 796 ntBASIC4.8□□□□□ -1.64
VCPP55072 ACTR3P2-201ENST00000439585 1257 ntBASIC4.8□□□□□ -1.64
VCPP55072 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC4.8□□□□□ -1.64
VCPP55072 CCRL1P1-201ENST00000449542 1053 ntBASIC4.8□□□□□ -1.64
VCPP55072 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.8□□□□□ -1.64
VCPP55072 EIF4A2P4-201ENST00000458691 1196 ntBASIC4.8□□□□□ -1.64
VCPP55072 RPL7L1P8-201ENST00000469911 741 ntBASIC4.8□□□□□ -1.64
VCPP55072 UQCRHP4-201ENST00000471686 272 ntBASIC4.8□□□□□ -1.64
VCPP55072 AC104763.1-201ENST00000475274 360 ntBASIC4.8□□□□□ -1.64
VCPP55072 AK5-208ENST00000478255 556 ntTSL 2 BASIC4.8□□□□□ -1.64
VCPP55072 ATG10-AS1-201ENST00000504846 648 ntBASIC4.8□□□□□ -1.64
VCPP55072 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.8□□□□□ -1.64
VCPP55072 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC4.8□□□□□ -1.64
VCPP55072 MTCYBP19-201ENST00000517463 1124 ntBASIC4.8□□□□□ -1.64
VCPP55072 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.8□□□□□ -1.64
VCPP55072 AP003730.1-201ENST00000524605 285 ntBASIC4.8□□□□□ -1.64
VCPP55072 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.8□□□□□ -1.64
VCPP55072 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.8□□□□□ -1.64
VCPP55072 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.8□□□□□ -1.64
VCPP55072 AC068446.3-201ENST00000555285 382 ntBASIC4.8□□□□□ -1.64
VCPP55072 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC4.8□□□□□ -1.64
VCPP55072 MIR3944-201ENST00000581277 108 ntBASIC4.8□□□□□ -1.64
VCPP55072 AC245128.3-201ENST00000594721 748 ntBASIC4.8□□□□□ -1.64
VCPP55072 AL133338.2-201ENST00000604292 736 ntBASIC4.8□□□□□ -1.64
VCPP55072 AL133370.2-201ENST00000619934 439 ntBASIC4.8□□□□□ -1.64
VCPP55072 AC244100.1-202ENST00000621554 382 ntBASIC4.8□□□□□ -1.64
VCPP55072 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.8□□□□□ -1.64
VCPP55072 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
VCPP55072 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
VCPP55072 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.8□□□□□ -1.64
VCPP55072 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
VCPP55072 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.8□□□□□ -1.64
VCPP55072 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
VCPP55072 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
VCPP55072 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
VCPP55072 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
VCPP55072 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
VCPP55072 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
VCPP55072 AC074029.4-201ENST00000624796 1859 ntBASIC4.79□□□□□ -1.64
VCPP55072 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.79□□□□□ -1.64
VCPP55072 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.79□□□□□ -1.64
VCPP55072 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
VCPP55072 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.79□□□□□ -1.64
VCPP55072 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.79□□□□□ -1.64
VCPP55072 AC108467.2-201ENST00000617640 1597 ntBASIC4.79□□□□□ -1.64
VCPP55072 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
VCPP55072 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.79□□□□□ -1.64
VCPP55072 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
VCPP55072 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
VCPP55072 AC021146.4-201ENST00000309229 279 ntBASIC4.79□□□□□ -1.64
VCPP55072 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.79□□□□□ -1.64
VCPP55072 AL139039.2-201ENST00000407436 479 ntBASIC4.79□□□□□ -1.64
VCPP55072 RNU6-564P-201ENST00000410983 104 ntBASIC4.79□□□□□ -1.64
VCPP55072 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.79□□□□□ -1.64
VCPP55072 RPL23AP65-201ENST00000475608 468 ntBASIC4.79□□□□□ -1.64
VCPP55072 AC006499.6-201ENST00000511169 607 ntBASIC4.79□□□□□ -1.64
VCPP55072 AC026726.1-201ENST00000512859 601 ntBASIC4.79□□□□□ -1.64
VCPP55072 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
VCPP55072 SNORA70.17-201ENST00000516449 133 ntBASIC4.79□□□□□ -1.64
VCPP55072 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC4.79□□□□□ -1.64
VCPP55072 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC4.79□□□□□ -1.64
VCPP55072 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
VCPP55072 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
VCPP55072 AGGF1P6-201ENST00000569213 976 ntBASIC4.79□□□□□ -1.64
VCPP55072 HMGB2P1-201ENST00000591146 634 ntBASIC4.79□□□□□ -1.64
VCPP55072 RPL7P50-201ENST00000600588 727 ntBASIC4.79□□□□□ -1.64
VCPP55072 AC022387.2-201ENST00000604050 448 ntBASIC4.79□□□□□ -1.64
VCPP55072 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC4.79□□□□□ -1.64
VCPP55072 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC4.79□□□□□ -1.64
VCPP55072 AC091953.5-201ENST00000622919 233 ntBASIC4.79□□□□□ -1.64
VCPP55072 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.79□□□□□ -1.64
VCPP55072 MIR492-201ENST00000638676 116 ntBASIC4.79□□□□□ -1.64
VCPP55072 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
VCPP55072 ZNF137P-201ENST00000456718 1920 ntBASIC4.79□□□□□ -1.64
VCPP55072 AC135352.1-201ENST00000506173 1418 ntBASIC4.79□□□□□ -1.64
VCPP55072 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.79□□□□□ -1.64
VCPP55072 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
VCPP55072 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
VCPP55072 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.78□□□□□ -1.64
VCPP55072 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
VCPP55072 AC010329.2-201ENST00000595195 2737 ntBASIC4.78□□□□□ -1.64
VCPP55072 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
VCPP55072 RNA5SP283-201ENST00000365604 119 ntBASIC4.78□□□□□ -1.64
VCPP55072 AC083799.1-201ENST00000366451 910 ntBASIC4.78□□□□□ -1.64
VCPP55072 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
VCPP55072 PTMAP2-201ENST00000397627 327 ntBASIC4.78□□□□□ -1.64
VCPP55072 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.78□□□□□ -1.64
VCPP55072 CYCSP19-201ENST00000411715 316 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms