Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC5.89□□□□□ -1.47
EPHB3P54753 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC5.89□□□□□ -1.47
EPHB3P54753 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC5.89□□□□□ -1.47
EPHB3P54753 AL049779.2-201ENST00000553847 315 ntBASIC5.89□□□□□ -1.47
EPHB3P54753 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC5.89□□□□□ -1.47
EPHB3P54753 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC5.89□□□□□ -1.47
EPHB3P54753 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC5.89□□□□□ -1.47
EPHB3P54753 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC5.89□□□□□ -1.47
EPHB3P54753 AC018809.2-201ENST00000602436 3823 ntBASIC5.89□□□□□ -1.47
EPHB3P54753 AP000860.1-201ENST00000605250 559 ntBASIC5.89□□□□□ -1.47
EPHB3P54753 AC011374.2-201ENST00000607135 526 ntBASIC5.89□□□□□ -1.47
EPHB3P54753 AL512329.2-201ENST00000607350 548 ntBASIC5.89□□□□□ -1.47
EPHB3P54753 AL133481.2-203ENST00000607558 139 ntBASIC5.89□□□□□ -1.47
EPHB3P54753 PART1_1.1-201ENST00000611761 217 ntBASIC5.89□□□□□ -1.47
EPHB3P54753 AL118522.2-201ENST00000616045 615 ntBASIC5.89□□□□□ -1.47
EPHB3P54753 U1.34-201ENST00000618578 162 ntBASIC5.89□□□□□ -1.47
EPHB3P54753 AL136221.1-201ENST00000621449 509 ntBASIC5.89□□□□□ -1.47
EPHB3P54753 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC5.89□□□□□ -1.47
EPHB3P54753 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
EPHB3P54753 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
EPHB3P54753 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
EPHB3P54753 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
EPHB3P54753 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.89□□□□□ -1.47
EPHB3P54753 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC5.89□□□□□ -1.47
EPHB3P54753 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
EPHB3P54753 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
EPHB3P54753 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
EPHB3P54753 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
EPHB3P54753 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.88□□□□□ -1.47
EPHB3P54753 HSPD1P8-201ENST00000400121 1658 ntBASIC5.88□□□□□ -1.47
EPHB3P54753 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
EPHB3P54753 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
EPHB3P54753 PABPC1P6-201ENST00000445594 1829 ntBASIC5.88□□□□□ -1.47
EPHB3P54753 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
EPHB3P54753 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.88□□□□□ -1.47
EPHB3P54753 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
EPHB3P54753 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.88□□□□□ -1.47
EPHB3P54753 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.88□□□□□ -1.47
EPHB3P54753 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
EPHB3P54753 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
EPHB3P54753 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
EPHB3P54753 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC5.88□□□□□ -1.47
EPHB3P54753 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
EPHB3P54753 RNU1-19P-201ENST00000363306 165 ntBASIC5.88□□□□□ -1.47
EPHB3P54753 RN7SKP226-201ENST00000364912 300 ntBASIC5.88□□□□□ -1.47
EPHB3P54753 AL451142.1-201ENST00000375867 775 ntBASIC5.88□□□□□ -1.47
EPHB3P54753 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC5.88□□□□□ -1.47
EPHB3P54753 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
EPHB3P54753 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC5.88□□□□□ -1.47
EPHB3P54753 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC5.88□□□□□ -1.47
EPHB3P54753 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC5.88□□□□□ -1.47
EPHB3P54753 RPS26P38-201ENST00000414476 348 ntBASIC5.88□□□□□ -1.47
EPHB3P54753 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC5.88□□□□□ -1.47
EPHB3P54753 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC5.88□□□□□ -1.47
EPHB3P54753 GTF2IP23-201ENST00000423746 351 ntBASIC5.88□□□□□ -1.47
EPHB3P54753 NANOGP4-201ENST00000427230 913 ntBASIC5.88□□□□□ -1.47
EPHB3P54753 RPL7L1P9-201ENST00000431298 745 ntBASIC5.88□□□□□ -1.47
EPHB3P54753 CYCSP6-201ENST00000434498 302 ntBASIC5.88□□□□□ -1.47
EPHB3P54753 OR6D1P-201ENST00000436165 939 ntBASIC5.88□□□□□ -1.47
EPHB3P54753 COX6CP12-201ENST00000446748 202 ntBASIC5.88□□□□□ -1.47
EPHB3P54753 FAR2P1-206ENST00000449736 709 ntBASIC5.88□□□□□ -1.47
EPHB3P54753 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC5.88□□□□□ -1.47
EPHB3P54753 AL672167.3-201ENST00000465951 960 ntBASIC5.88□□□□□ -1.47
EPHB3P54753 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
EPHB3P54753 RPS7P6-201ENST00000485777 579 ntBASIC5.88□□□□□ -1.47
EPHB3P54753 UBA52P7-201ENST00000486088 380 ntBASIC5.88□□□□□ -1.47
EPHB3P54753 AC091951.2-201ENST00000500762 203 ntBASIC5.88□□□□□ -1.47
EPHB3P54753 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC5.88□□□□□ -1.47
EPHB3P54753 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.88□□□□□ -1.47
EPHB3P54753 ATP1B1P1-201ENST00000509767 915 ntBASIC5.88□□□□□ -1.47
EPHB3P54753 IGLV3-24-201ENST00000517477 197 ntBASIC5.88□□□□□ -1.47
EPHB3P54753 CDC42P3-201ENST00000518493 633 ntBASIC5.88□□□□□ -1.47
EPHB3P54753 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC5.88□□□□□ -1.47
EPHB3P54753 OR10G5P-201ENST00000532733 358 ntBASIC5.88□□□□□ -1.47
EPHB3P54753 LDHC-203ENST00000535809 757 ntTSL 5 BASIC5.88□□□□□ -1.47
EPHB3P54753 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC5.88□□□□□ -1.47
EPHB3P54753 UBE2FP2-201ENST00000566646 462 ntBASIC5.88□□□□□ -1.47
EPHB3P54753 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5.88□□□□□ -1.47
EPHB3P54753 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.88□□□□□ -1.47
EPHB3P54753 OR4K7P-201ENST00000580232 945 ntBASIC5.88□□□□□ -1.47
EPHB3P54753 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.88□□□□□ -1.47
EPHB3P54753 BNIP3P9-201ENST00000603714 553 ntBASIC5.88□□□□□ -1.47
EPHB3P54753 AC023158.2-201ENST00000614876 543 ntBASIC5.88□□□□□ -1.47
EPHB3P54753 AC025574.2-201ENST00000615621 514 ntBASIC5.88□□□□□ -1.47
EPHB3P54753 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC5.88□□□□□ -1.47
EPHB3P54753 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.88□□□□□ -1.47
EPHB3P54753 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC5.88□□□□□ -1.47
EPHB3P54753 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
EPHB3P54753 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
EPHB3P54753 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.88□□□□□ -1.47
EPHB3P54753 AC093297.3-201ENST00000607056 2517 ntBASIC5.88□□□□□ -1.47
EPHB3P54753 AC007159.1-201ENST00000566529 4706 ntBASIC5.88□□□□□ -1.47
EPHB3P54753 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
EPHB3P54753 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
EPHB3P54753 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC5.88□□□□□ -1.47
EPHB3P54753 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC5.88□□□□□ -1.47
EPHB3P54753 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
EPHB3P54753 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
EPHB3P54753 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
EPHB3P54753 C4BPAP1-201ENST00000415474 1893 ntBASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 138.1 ms