Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 IGJP1-201ENST00000522682 475 ntBASIC5.3□□□□□ -1.56
COPAP53621 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC5.3□□□□□ -1.56
COPAP53621 AC023050.2-201ENST00000544968 387 ntBASIC5.3□□□□□ -1.56
COPAP53621 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.3□□□□□ -1.56
COPAP53621 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC5.3□□□□□ -1.56
COPAP53621 AC061975.8-201ENST00000587058 721 ntBASIC5.3□□□□□ -1.56
COPAP53621 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC5.3□□□□□ -1.56
COPAP53621 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC5.3□□□□□ -1.56
COPAP53621 AC133552.5-201ENST00000604266 540 ntBASIC5.3□□□□□ -1.56
COPAP53621 AC021749.1-201ENST00000604322 607 ntBASIC5.3□□□□□ -1.56
COPAP53621 AL392112.1-201ENST00000605115 829 ntBASIC5.3□□□□□ -1.56
COPAP53621 AC107952.2-201ENST00000606048 486 ntBASIC5.3□□□□□ -1.56
COPAP53621 AC016877.3-201ENST00000606778 504 ntBASIC5.3□□□□□ -1.56
COPAP53621 AP000238.1-201ENST00000608759 426 ntBASIC5.3□□□□□ -1.56
COPAP53621 AC093799.2-201ENST00000610062 578 ntBASIC5.3□□□□□ -1.56
COPAP53621 AC244107.2-201ENST00000611773 76 ntBASIC5.3□□□□□ -1.56
COPAP53621 AL353726.1-201ENST00000614041 1000 ntBASIC5.3□□□□□ -1.56
COPAP53621 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC5.3□□□□□ -1.56
COPAP53621 AP003400.3-201ENST00000624904 346 ntBASIC5.3□□□□□ -1.56
COPAP53621 AC092608.3-201ENST00000625017 386 ntBASIC5.3□□□□□ -1.56
COPAP53621 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
COPAP53621 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC5.3□□□□□ -1.56
COPAP53621 BMS1P21-201ENST00000634565 365 ntBASIC5.3□□□□□ -1.56
COPAP53621 ATE1-AS1-202ENST00000636460 506 ntBASIC5.3□□□□□ -1.56
COPAP53621 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
COPAP53621 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
COPAP53621 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
COPAP53621 THAP12P4-201ENST00000528321 2266 ntBASIC5.3□□□□□ -1.56
COPAP53621 AC096656.1-201ENST00000623826 1364 ntBASIC5.29□□□□□ -1.56
COPAP53621 AL731532.2-201ENST00000623542 1953 ntBASIC5.29□□□□□ -1.56
COPAP53621 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
COPAP53621 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
COPAP53621 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.29□□□□□ -1.56
COPAP53621 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
COPAP53621 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
COPAP53621 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
COPAP53621 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.29□□□□□ -1.56
COPAP53621 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
COPAP53621 AC025574.1-201ENST00000554784 1653 ntBASIC5.29□□□□□ -1.56
COPAP53621 AC006042.3-201ENST00000454684 1469 ntBASIC5.29□□□□□ -1.56
COPAP53621 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
COPAP53621 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
COPAP53621 RNA5SP123-201ENST00000363244 119 ntBASIC5.29□□□□□ -1.56
COPAP53621 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
COPAP53621 AL079342.2-201ENST00000403367 482 ntBASIC5.29□□□□□ -1.56
COPAP53621 MIR1182-201ENST00000408363 97 ntBASIC5.29□□□□□ -1.56
COPAP53621 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
COPAP53621 AL139128.1-201ENST00000413921 941 ntBASIC5.29□□□□□ -1.56
COPAP53621 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC5.29□□□□□ -1.56
COPAP53621 GAPDHP49-201ENST00000421421 961 ntBASIC5.29□□□□□ -1.56
COPAP53621 RPF2P1-201ENST00000424137 906 ntBASIC5.29□□□□□ -1.56
COPAP53621 MOB1AP1-201ENST00000430903 535 ntBASIC5.29□□□□□ -1.56
COPAP53621 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5.29□□□□□ -1.56
COPAP53621 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC5.29□□□□□ -1.56
COPAP53621 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC5.29□□□□□ -1.56
COPAP53621 AL772161.1-201ENST00000439130 476 ntBASIC5.29□□□□□ -1.56
COPAP53621 RPS7P5-201ENST00000441482 581 ntBASIC5.29□□□□□ -1.56
COPAP53621 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC5.29□□□□□ -1.56
COPAP53621 ATP5A1P7-201ENST00000453978 1279 ntBASIC5.29□□□□□ -1.56
COPAP53621 AC079168.1-201ENST00000458741 345 ntBASIC5.29□□□□□ -1.56
COPAP53621 RPS4XP12-201ENST00000461747 709 ntBASIC5.29□□□□□ -1.56
COPAP53621 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
COPAP53621 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC5.29□□□□□ -1.56
COPAP53621 AC022360.1-201ENST00000521058 340 ntBASIC5.29□□□□□ -1.56
COPAP53621 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC5.29□□□□□ -1.56
COPAP53621 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC5.29□□□□□ -1.56
COPAP53621 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC5.29□□□□□ -1.56
COPAP53621 AC044913.1-201ENST00000557200 430 ntBASIC5.29□□□□□ -1.56
COPAP53621 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC5.29□□□□□ -1.56
COPAP53621 AC090751.1-201ENST00000566966 267 ntBASIC5.29□□□□□ -1.56
COPAP53621 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC5.29□□□□□ -1.56
COPAP53621 AC090312.2-201ENST00000582687 378 ntBASIC5.29□□□□□ -1.56
COPAP53621 AC069366.1-201ENST00000583159 838 ntBASIC5.29□□□□□ -1.56
COPAP53621 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
COPAP53621 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC5.29□□□□□ -1.56
COPAP53621 VN1R83P-201ENST00000595685 445 ntBASIC5.29□□□□□ -1.56
COPAP53621 VN1R78P-201ENST00000597393 564 ntBASIC5.29□□□□□ -1.56
COPAP53621 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC5.29□□□□□ -1.56
COPAP53621 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.29□□□□□ -1.56
COPAP53621 AC009027.1-201ENST00000604510 479 ntBASIC5.29□□□□□ -1.56
COPAP53621 MIR6748-201ENST00000610433 71 ntBASIC5.29□□□□□ -1.56
COPAP53621 AC024257.5-201ENST00000612739 531 ntBASIC5.29□□□□□ -1.56
COPAP53621 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC5.29□□□□□ -1.56
COPAP53621 AC023509.5-201ENST00000617434 807 ntBASIC5.29□□□□□ -1.56
COPAP53621 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC5.29□□□□□ -1.56
COPAP53621 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
COPAP53621 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
COPAP53621 AC000367.1-201ENST00000452711 1766 ntBASIC5.29□□□□□ -1.56
COPAP53621 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.29□□□□□ -1.56
COPAP53621 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC5.28□□□□□ -1.56
COPAP53621 AL450345.1-202ENST00000605741 3881 ntBASIC5.28□□□□□ -1.56
COPAP53621 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
COPAP53621 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
COPAP53621 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.28□□□□□ -1.56
COPAP53621 Z95327.2-201ENST00000414579 1873 ntBASIC5.28□□□□□ -1.56
COPAP53621 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
COPAP53621 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.28□□□□□ -1.56
COPAP53621 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
COPAP53621 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
COPAP53621 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms