Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
USP11P51784 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
USP11P51784 DCAF13P3-201ENST00000561147 1334 ntBASIC6.53□□□□□ -1.36
USP11P51784 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC6.53□□□□□ -1.36
USP11P51784 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
USP11P51784 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC6.53□□□□□ -1.36
USP11P51784 AC092070.2-203ENST00000598377 3644 ntBASIC6.53□□□□□ -1.36
USP11P51784 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
USP11P51784 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
USP11P51784 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
USP11P51784 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
USP11P51784 RNU6-1090P-201ENST00000364065 94 ntBASIC6.53□□□□□ -1.36
USP11P51784 RNA5SP394-201ENST00000364216 119 ntBASIC6.53□□□□□ -1.36
USP11P51784 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
USP11P51784 MTCYBP36-201ENST00000404146 440 ntBASIC6.53□□□□□ -1.36
USP11P51784 RN7SKP279-201ENST00000411383 298 ntBASIC6.53□□□□□ -1.36
USP11P51784 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC6.53□□□□□ -1.36
USP11P51784 RPL21P111-201ENST00000418453 477 ntBASIC6.53□□□□□ -1.36
USP11P51784 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC6.53□□□□□ -1.36
USP11P51784 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC6.53□□□□□ -1.36
USP11P51784 REREP1Y-201ENST00000422655 198 ntBASIC6.53□□□□□ -1.36
USP11P51784 AC008850.1-201ENST00000427546 362 ntBASIC6.53□□□□□ -1.36
USP11P51784 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC6.53□□□□□ -1.36
USP11P51784 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
USP11P51784 REREP2Y-201ENST00000439103 200 ntBASIC6.53□□□□□ -1.36
USP11P51784 MTND4P19-201ENST00000446659 478 ntBASIC6.53□□□□□ -1.36
USP11P51784 RPL31P15-201ENST00000449770 338 ntBASIC6.53□□□□□ -1.36
USP11P51784 ARPC3P2-201ENST00000457786 533 ntBASIC6.53□□□□□ -1.36
USP11P51784 PSAT1P4-201ENST00000466500 526 ntBASIC6.53□□□□□ -1.36
USP11P51784 ALG13-211ENST00000473389 693 ntTSL 2 BASIC6.53□□□□□ -1.36
USP11P51784 RPL32P33-201ENST00000487023 394 ntBASIC6.53□□□□□ -1.36
USP11P51784 NIPA2P2-201ENST00000496376 1083 ntBASIC6.53□□□□□ -1.36
USP11P51784 IMPA1P1-201ENST00000510718 842 ntBASIC6.53□□□□□ -1.36
USP11P51784 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC6.53□□□□□ -1.36
USP11P51784 NPM1P21-201ENST00000513394 762 ntBASIC6.53□□□□□ -1.36
USP11P51784 CYCSP22-201ENST00000517555 339 ntBASIC6.53□□□□□ -1.36
USP11P51784 IGKV2-19-201ENST00000518132 283 ntBASIC6.53□□□□□ -1.36
USP11P51784 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC6.53□□□□□ -1.36
USP11P51784 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC6.53□□□□□ -1.36
USP11P51784 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC6.53□□□□□ -1.36
USP11P51784 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC6.53□□□□□ -1.36
USP11P51784 HMGB1P42-201ENST00000532126 553 ntBASIC6.53□□□□□ -1.36
USP11P51784 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC6.53□□□□□ -1.36
USP11P51784 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC6.53□□□□□ -1.36
USP11P51784 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC6.53□□□□□ -1.36
USP11P51784 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC6.53□□□□□ -1.36
USP11P51784 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC6.53□□□□□ -1.36
USP11P51784 PCMTD1P2-201ENST00000565017 355 ntBASIC6.53□□□□□ -1.36
USP11P51784 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC6.53□□□□□ -1.36
USP11P51784 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC6.53□□□□□ -1.36
USP11P51784 AC068020.1-201ENST00000594215 661 ntBASIC6.53□□□□□ -1.36
USP11P51784 AC005261.5-201ENST00000596280 355 ntBASIC6.53□□□□□ -1.36
USP11P51784 AL513327.3-201ENST00000602618 469 ntBASIC6.53□□□□□ -1.36
USP11P51784 AC130352.1-201ENST00000602979 661 ntBASIC6.53□□□□□ -1.36
USP11P51784 AC011453.2-201ENST00000603737 729 ntBASIC6.53□□□□□ -1.36
USP11P51784 AC019193.2-201ENST00000610012 634 ntBASIC6.53□□□□□ -1.36
USP11P51784 AC131902.3-201ENST00000611767 581 ntBASIC6.53□□□□□ -1.36
USP11P51784 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC6.53□□□□□ -1.36
USP11P51784 OR8G7P-201ENST00000616658 848 ntBASIC6.53□□□□□ -1.36
USP11P51784 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
USP11P51784 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
USP11P51784 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC6.53□□□□□ -1.36
USP11P51784 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC6.53□□□□□ -1.36
USP11P51784 AL591135.1-201ENST00000401578 5914 ntBASIC6.53□□□□□ -1.36
USP11P51784 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
USP11P51784 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
USP11P51784 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC6.53□□□□□ -1.36
USP11P51784 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
USP11P51784 AC125336.1-201ENST00000508893 2827 ntBASIC6.53□□□□□ -1.36
USP11P51784 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
USP11P51784 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
USP11P51784 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
USP11P51784 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.53□□□□□ -1.36
USP11P51784 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC6.53□□□□□ -1.36
USP11P51784 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC6.53□□□□□ -1.36
USP11P51784 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
USP11P51784 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
USP11P51784 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC6.52□□□□□ -1.37
USP11P51784 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
USP11P51784 ENSAP3-201ENST00000312710 333 ntBASIC6.52□□□□□ -1.37
USP11P51784 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
USP11P51784 RNU6-501P-201ENST00000364072 100 ntBASIC6.52□□□□□ -1.37
USP11P51784 RNU6-780P-201ENST00000391030 104 ntBASIC6.52□□□□□ -1.37
USP11P51784 AL031985.1-201ENST00000392713 418 ntBASIC6.52□□□□□ -1.37
USP11P51784 HMGB1P20-201ENST00000402555 677 ntBASIC6.52□□□□□ -1.37
USP11P51784 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC6.52□□□□□ -1.37
USP11P51784 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC6.52□□□□□ -1.37
USP11P51784 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC6.52□□□□□ -1.37
USP11P51784 SDHDP6-201ENST00000414693 480 ntBASIC6.52□□□□□ -1.37
USP11P51784 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC6.52□□□□□ -1.37
USP11P51784 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC6.52□□□□□ -1.37
USP11P51784 RPL34P3-201ENST00000421454 338 ntBASIC6.52□□□□□ -1.37
USP11P51784 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC6.52□□□□□ -1.37
USP11P51784 AL050321.1-201ENST00000432363 400 ntBASIC6.52□□□□□ -1.37
USP11P51784 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC6.52□□□□□ -1.37
USP11P51784 AC242426.1-201ENST00000435270 960 ntBASIC6.52□□□□□ -1.37
USP11P51784 KRT8P51-201ENST00000438938 274 ntBASIC6.52□□□□□ -1.37
USP11P51784 AL450263.2-201ENST00000439400 589 ntBASIC6.52□□□□□ -1.37
USP11P51784 RPS4XP4-201ENST00000443195 763 ntBASIC6.52□□□□□ -1.37
USP11P51784 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC6.52□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms