Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC6.06□□□□□ -1.44
MRE11P49959 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
MRE11P49959 ERP27-202ENST00000540097 993 ntTSL 2 BASIC6.06□□□□□ -1.44
MRE11P49959 AC011611.5-201ENST00000552477 578 ntBASIC6.06□□□□□ -1.44
MRE11P49959 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
MRE11P49959 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC6.06□□□□□ -1.44
MRE11P49959 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC6.06□□□□□ -1.44
MRE11P49959 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC6.06□□□□□ -1.44
MRE11P49959 SUMO2P14-201ENST00000604488 293 ntBASIC6.06□□□□□ -1.44
MRE11P49959 TAS2R6P-201ENST00000605022 826 ntBASIC6.06□□□□□ -1.44
MRE11P49959 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC6.06□□□□□ -1.44
MRE11P49959 AP003392.5-201ENST00000607857 415 ntBASIC6.06□□□□□ -1.44
MRE11P49959 AC015722.2-201ENST00000622210 551 ntBASIC6.06□□□□□ -1.44
MRE11P49959 MIR8080-201ENST00000622224 89 ntBASIC6.06□□□□□ -1.44
MRE11P49959 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC6.06□□□□□ -1.44
MRE11P49959 AC087565.3-203ENST00000641018 837 ntBASIC6.06□□□□□ -1.44
MRE11P49959 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
MRE11P49959 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
MRE11P49959 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
MRE11P49959 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC6.06□□□□□ -1.44
MRE11P49959 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC6.06□□□□□ -1.44
MRE11P49959 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC6.06□□□□□ -1.44
MRE11P49959 AL034370.1-201ENST00000397254 1590 ntBASIC6.06□□□□□ -1.44
MRE11P49959 AC096656.1-201ENST00000623826 1364 ntBASIC6.06□□□□□ -1.44
MRE11P49959 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC6.05□□□□□ -1.44
MRE11P49959 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC6.05□□□□□ -1.44
MRE11P49959 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC6.05□□□□□ -1.44
MRE11P49959 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
MRE11P49959 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
MRE11P49959 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC6.05□□□□□ -1.44
MRE11P49959 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
MRE11P49959 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
MRE11P49959 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC6.05□□□□□ -1.44
MRE11P49959 RNU6-31P-201ENST00000384388 108 ntBASIC6.05□□□□□ -1.44
MRE11P49959 AL355379.1-201ENST00000405542 640 ntBASIC6.05□□□□□ -1.44
MRE11P49959 SNORA11.2-201ENST00000408318 127 ntBASIC6.05□□□□□ -1.44
MRE11P49959 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
MRE11P49959 AC011233.1-201ENST00000422812 283 ntBASIC6.05□□□□□ -1.44
MRE11P49959 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC6.05□□□□□ -1.44
MRE11P49959 ZDHHC20P2-201ENST00000424108 429 ntBASIC6.05□□□□□ -1.44
MRE11P49959 AC005033.1-201ENST00000428904 813 ntBASIC6.05□□□□□ -1.44
MRE11P49959 HMGB3P10-201ENST00000434734 572 ntBASIC6.05□□□□□ -1.44
MRE11P49959 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC6.05□□□□□ -1.44
MRE11P49959 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC6.05□□□□□ -1.44
MRE11P49959 NOP56P2-201ENST00000447491 769 ntBASIC6.05□□□□□ -1.44
MRE11P49959 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC6.05□□□□□ -1.44
MRE11P49959 AC234781.3-201ENST00000452540 973 ntBASIC6.05□□□□□ -1.44
MRE11P49959 AC244505.3-201ENST00000454598 187 ntBASIC6.05□□□□□ -1.44
MRE11P49959 MTCO2P18-201ENST00000457151 658 ntBASIC6.05□□□□□ -1.44
MRE11P49959 AC022795.1-201ENST00000473808 480 ntBASIC6.05□□□□□ -1.44
MRE11P49959 AC108734.3-201ENST00000481241 1165 ntBASIC6.05□□□□□ -1.44
MRE11P49959 RPL23AP44-201ENST00000482216 473 ntBASIC6.05□□□□□ -1.44
MRE11P49959 AC009120.1-201ENST00000493458 473 ntBASIC6.05□□□□□ -1.44
MRE11P49959 AC073073.1-201ENST00000493920 463 ntBASIC6.05□□□□□ -1.44
MRE11P49959 AC107401.1-201ENST00000503426 685 ntBASIC6.05□□□□□ -1.44
MRE11P49959 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC6.05□□□□□ -1.44
MRE11P49959 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
MRE11P49959 MTCO3P7-201ENST00000510008 774 ntBASIC6.05□□□□□ -1.44
MRE11P49959 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC6.05□□□□□ -1.44
MRE11P49959 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC6.05□□□□□ -1.44
MRE11P49959 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
MRE11P49959 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
MRE11P49959 AC022832.1-201ENST00000530718 645 ntBASIC6.05□□□□□ -1.44
MRE11P49959 DCN-210ENST00000547568 823 ntTSL 3 BASIC6.05□□□□□ -1.44
MRE11P49959 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC6.05□□□□□ -1.44
MRE11P49959 AL049779.2-201ENST00000553847 315 ntBASIC6.05□□□□□ -1.44
MRE11P49959 IGBP1P1-201ENST00000554337 1009 ntBASIC6.05□□□□□ -1.44
MRE11P49959 AL391156.1-201ENST00000554965 554 ntBASIC6.05□□□□□ -1.44
MRE11P49959 SNORD39.2-201ENST00000579995 76 ntBASIC6.05□□□□□ -1.44
MRE11P49959 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC6.05□□□□□ -1.44
MRE11P49959 BMS1P7-201ENST00000602440 1052 ntBASIC6.05□□□□□ -1.44
MRE11P49959 AC124312.4-201ENST00000605533 310 ntBASIC6.05□□□□□ -1.44
MRE11P49959 AC012414.7-202ENST00000622705 1090 ntBASIC6.05□□□□□ -1.44
MRE11P49959 AL596275.2-204ENST00000641628 552 ntBASIC6.05□□□□□ -1.44
MRE11P49959 AL596275.2-206ENST00000641957 626 ntBASIC6.05□□□□□ -1.44
MRE11P49959 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
MRE11P49959 AL049737.1-201ENST00000413920 1403 ntBASIC6.05□□□□□ -1.44
MRE11P49959 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
MRE11P49959 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
MRE11P49959 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
MRE11P49959 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
MRE11P49959 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
MRE11P49959 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
MRE11P49959 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
MRE11P49959 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC6.05□□□□□ -1.44
MRE11P49959 SALL4P2-201ENST00000423288 2910 ntBASIC6.05□□□□□ -1.44
MRE11P49959 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
MRE11P49959 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
MRE11P49959 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
MRE11P49959 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC6.04□□□□□ -1.44
MRE11P49959 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
MRE11P49959 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
MRE11P49959 FAM133CP-201ENST00000332869 704 ntBASIC6.04□□□□□ -1.44
MRE11P49959 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC6.04□□□□□ -1.44
MRE11P49959 RNU4-4P-201ENST00000364588 130 ntBASIC6.04□□□□□ -1.44
MRE11P49959 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
MRE11P49959 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC6.04□□□□□ -1.44
MRE11P49959 NUDT19P3-201ENST00000404698 555 ntBASIC6.04□□□□□ -1.44
MRE11P49959 AL590084.1-201ENST00000407885 387 ntBASIC6.04□□□□□ -1.44
MRE11P49959 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms