Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 RNA5SP49-201ENST00000516450 115 ntBASIC4.13□□□□□ -1.75
RPA3P35244 RNA5SP73-201ENST00000516744 108 ntBASIC4.13□□□□□ -1.75
RPA3P35244 snoU109.6-201ENST00000516831 118 ntBASIC4.13□□□□□ -1.75
RPA3P35244 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
RPA3P35244 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.13□□□□□ -1.75
RPA3P35244 TRAV8-5-201ENST00000537369 341 ntBASIC4.13□□□□□ -1.75
RPA3P35244 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.13□□□□□ -1.75
RPA3P35244 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.13□□□□□ -1.75
RPA3P35244 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.13□□□□□ -1.75
RPA3P35244 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC4.13□□□□□ -1.75
RPA3P35244 MTND2P13-201ENST00000577438 1039 ntBASIC4.13□□□□□ -1.75
RPA3P35244 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.13□□□□□ -1.75
RPA3P35244 AC114781.5-201ENST00000615297 108 ntBASIC4.13□□□□□ -1.75
RPA3P35244 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.13□□□□□ -1.75
RPA3P35244 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC4.13□□□□□ -1.75
RPA3P35244 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC4.13□□□□□ -1.75
RPA3P35244 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.13□□□□□ -1.75
RPA3P35244 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
RPA3P35244 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
RPA3P35244 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.13□□□□□ -1.75
RPA3P35244 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
RPA3P35244 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.13□□□□□ -1.75
RPA3P35244 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
RPA3P35244 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
RPA3P35244 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
RPA3P35244 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.12□□□□□ -1.75
RPA3P35244 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
RPA3P35244 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
RPA3P35244 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4.12□□□□□ -1.75
RPA3P35244 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
RPA3P35244 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
RPA3P35244 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
RPA3P35244 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.12□□□□□ -1.75
RPA3P35244 RNU1-14P-201ENST00000362759 152 ntBASIC4.12□□□□□ -1.75
RPA3P35244 RNU1-132P-201ENST00000364300 164 ntBASIC4.12□□□□□ -1.75
RPA3P35244 MT-RNR1-201ENST00000389680 954 ntBASIC4.12□□□□□ -1.75
RPA3P35244 RN7SKP235-201ENST00000410662 305 ntBASIC4.12□□□□□ -1.75
RPA3P35244 RPL23AP26-201ENST00000412728 464 ntBASIC4.12□□□□□ -1.75
RPA3P35244 USP12PY-201ENST00000427677 1064 ntBASIC4.12□□□□□ -1.75
RPA3P35244 RPL23AP46-201ENST00000438548 490 ntBASIC4.12□□□□□ -1.75
RPA3P35244 MTND6P18-201ENST00000439477 513 ntBASIC4.12□□□□□ -1.75
RPA3P35244 AC009220.1-201ENST00000451614 275 ntBASIC4.12□□□□□ -1.75
RPA3P35244 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.12□□□□□ -1.75
RPA3P35244 AC009963.2-201ENST00000453431 138 ntBASIC4.12□□□□□ -1.75
RPA3P35244 AC109327.1-201ENST00000471666 403 ntBASIC4.12□□□□□ -1.75
RPA3P35244 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.12□□□□□ -1.75
RPA3P35244 AP001960.1-201ENST00000506494 658 ntBASIC4.12□□□□□ -1.75
RPA3P35244 AC008958.1-201ENST00000511047 682 ntBASIC4.12□□□□□ -1.75
RPA3P35244 KCTD9P2-201ENST00000512203 1013 ntBASIC4.12□□□□□ -1.75
RPA3P35244 RNA5SP519-201ENST00000516480 119 ntBASIC4.12□□□□□ -1.75
RPA3P35244 RNA5SP143-201ENST00000516936 115 ntBASIC4.12□□□□□ -1.75
RPA3P35244 AC090281.1-201ENST00000523019 276 ntBASIC4.12□□□□□ -1.75
RPA3P35244 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.12□□□□□ -1.75
RPA3P35244 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.12□□□□□ -1.75
RPA3P35244 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.12□□□□□ -1.75
RPA3P35244 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.12□□□□□ -1.75
RPA3P35244 ARF4P1-201ENST00000605447 541 ntBASIC4.12□□□□□ -1.75
RPA3P35244 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.12□□□□□ -1.75
RPA3P35244 MIR486-1-201ENST00000612171 68 ntBASIC4.12□□□□□ -1.75
RPA3P35244 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC4.12□□□□□ -1.75
RPA3P35244 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.12□□□□□ -1.75
RPA3P35244 AP002967.1-201ENST00000624203 539 ntBASIC4.12□□□□□ -1.75
RPA3P35244 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC4.12□□□□□ -1.75
RPA3P35244 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.12□□□□□ -1.75
RPA3P35244 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.12□□□□□ -1.75
RPA3P35244 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.12□□□□□ -1.75
RPA3P35244 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.12□□□□□ -1.75
RPA3P35244 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.12□□□□□ -1.75
RPA3P35244 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
RPA3P35244 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
RPA3P35244 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
RPA3P35244 RN7SKP224-201ENST00000364140 325 ntBASIC4.11□□□□□ -1.75
RPA3P35244 RNA5SP366-201ENST00000365454 123 ntBASIC4.11□□□□□ -1.75
RPA3P35244 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
RPA3P35244 MIR141-201ENST00000384975 95 ntBASIC4.11□□□□□ -1.75
RPA3P35244 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
RPA3P35244 RN7SKP56-201ENST00000410513 331 ntBASIC4.11□□□□□ -1.75
RPA3P35244 Y_RNA.625-201ENST00000411256 107 ntBASIC4.11□□□□□ -1.75
RPA3P35244 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC4.11□□□□□ -1.75
RPA3P35244 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.11□□□□□ -1.75
RPA3P35244 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC4.11□□□□□ -1.75
RPA3P35244 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.11□□□□□ -1.75
RPA3P35244 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.11□□□□□ -1.75
RPA3P35244 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.11□□□□□ -1.75
RPA3P35244 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC4.11□□□□□ -1.75
RPA3P35244 AC093824.1-201ENST00000508796 343 ntBASIC4.11□□□□□ -1.75
RPA3P35244 HPRT1P1-201ENST00000509498 657 ntBASIC4.11□□□□□ -1.75
RPA3P35244 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC4.11□□□□□ -1.75
RPA3P35244 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC4.11□□□□□ -1.75
RPA3P35244 AC010342.1-201ENST00000514047 877 ntBASIC4.11□□□□□ -1.75
RPA3P35244 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC4.11□□□□□ -1.75
RPA3P35244 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.11□□□□□ -1.75
RPA3P35244 HIGD1AP5-201ENST00000529959 259 ntBASIC4.11□□□□□ -1.75
RPA3P35244 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
RPA3P35244 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.11□□□□□ -1.75
RPA3P35244 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
RPA3P35244 GNRHR2P1-201ENST00000555315 631 ntBASIC4.11□□□□□ -1.75
RPA3P35244 RPL23AP87-202ENST00000573039 466 ntBASIC4.11□□□□□ -1.75
RPA3P35244 AC023575.1-201ENST00000580510 358 ntBASIC4.11□□□□□ -1.75
RPA3P35244 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms