Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CTNNA1P35221 AC119744.1-201ENST00000454746 1715 ntBASIC4.8□□□□□ -1.64
CTNNA1P35221 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CTNNA1P35221 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
CTNNA1P35221 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
CTNNA1P35221 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CTNNA1P35221 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.8□□□□□ -1.64
CTNNA1P35221 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC4.8□□□□□ -1.64
CTNNA1P35221 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.8□□□□□ -1.64
CTNNA1P35221 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CTNNA1P35221 RNA5SP191-201ENST00000362585 102 ntBASIC4.8□□□□□ -1.64
CTNNA1P35221 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CTNNA1P35221 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.8□□□□□ -1.64
CTNNA1P35221 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CTNNA1P35221 RNA5SP113-201ENST00000410486 84 ntBASIC4.8□□□□□ -1.64
CTNNA1P35221 AL357078.2-201ENST00000416486 427 ntBASIC4.8□□□□□ -1.64
CTNNA1P35221 AC004074.1-201ENST00000421810 1063 ntBASIC4.8□□□□□ -1.64
CTNNA1P35221 AC073508.1-201ENST00000428866 656 ntBASIC4.8□□□□□ -1.64
CTNNA1P35221 OR1H1P-201ENST00000448731 937 ntBASIC4.8□□□□□ -1.64
CTNNA1P35221 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.8□□□□□ -1.64
CTNNA1P35221 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.8□□□□□ -1.64
CTNNA1P35221 S100A11P1-201ENST00000477525 312 ntBASIC4.8□□□□□ -1.64
CTNNA1P35221 AC090013.1-201ENST00000485147 480 ntBASIC4.8□□□□□ -1.64
CTNNA1P35221 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC4.8□□□□□ -1.64
CTNNA1P35221 RPL23AP73-201ENST00000492507 471 ntBASIC4.8□□□□□ -1.64
CTNNA1P35221 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.8□□□□□ -1.64
CTNNA1P35221 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.8□□□□□ -1.64
CTNNA1P35221 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.8□□□□□ -1.64
CTNNA1P35221 AC008494.2-201ENST00000514544 370 ntBASIC4.8□□□□□ -1.64
CTNNA1P35221 IGLV3-26-201ENST00000520756 302 ntBASIC4.8□□□□□ -1.64
CTNNA1P35221 IGHVIII-67-4-201ENST00000524281 296 ntBASIC4.8□□□□□ -1.64
CTNNA1P35221 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.8□□□□□ -1.64
CTNNA1P35221 HMGN2P6-201ENST00000551091 273 ntBASIC4.8□□□□□ -1.64
CTNNA1P35221 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC4.8□□□□□ -1.64
CTNNA1P35221 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.8□□□□□ -1.64
CTNNA1P35221 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CTNNA1P35221 AC009117.1-201ENST00000563948 554 ntBASIC4.8□□□□□ -1.64
CTNNA1P35221 AC079880.2-201ENST00000603790 1213 ntBASIC4.8□□□□□ -1.64
CTNNA1P35221 OR2BH1P-201ENST00000608850 864 ntBASIC4.8□□□□□ -1.64
CTNNA1P35221 AL512624.1-201ENST00000613638 469 ntBASIC4.8□□□□□ -1.64
CTNNA1P35221 STMN1P1-201ENST00000617809 440 ntBASIC4.8□□□□□ -1.64
CTNNA1P35221 AC087385.3-201ENST00000620477 187 ntBASIC4.8□□□□□ -1.64
CTNNA1P35221 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
CTNNA1P35221 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CTNNA1P35221 AC091948.2-201ENST00000636510 279 ntBASIC4.8□□□□□ -1.64
CTNNA1P35221 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CTNNA1P35221 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
CTNNA1P35221 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
CTNNA1P35221 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
CTNNA1P35221 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.8□□□□□ -1.64
CTNNA1P35221 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.8□□□□□ -1.64
CTNNA1P35221 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CTNNA1P35221 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
CTNNA1P35221 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CTNNA1P35221 OR51H2P-202ENST00000641424 3046 ntBASIC4.79□□□□□ -1.64
CTNNA1P35221 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.79□□□□□ -1.64
CTNNA1P35221 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.79□□□□□ -1.64
CTNNA1P35221 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.79□□□□□ -1.64
CTNNA1P35221 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.79□□□□□ -1.64
CTNNA1P35221 FCF1P5-201ENST00000406490 482 ntBASIC4.79□□□□□ -1.64
CTNNA1P35221 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC4.79□□□□□ -1.64
CTNNA1P35221 RN7SKP100-201ENST00000411258 284 ntBASIC4.79□□□□□ -1.64
CTNNA1P35221 RPL23AP27-201ENST00000415161 451 ntBASIC4.79□□□□□ -1.64
CTNNA1P35221 COX6B1P1-201ENST00000415962 213 ntBASIC4.79□□□□□ -1.64
CTNNA1P35221 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC4.79□□□□□ -1.64
CTNNA1P35221 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.79□□□□□ -1.64
CTNNA1P35221 AC008065.1-201ENST00000428525 348 ntBASIC4.79□□□□□ -1.64
CTNNA1P35221 RPS26P40-201ENST00000435209 294 ntBASIC4.79□□□□□ -1.64
CTNNA1P35221 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CTNNA1P35221 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC4.79□□□□□ -1.64
CTNNA1P35221 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC4.79□□□□□ -1.64
CTNNA1P35221 AL645939.1-201ENST00000453429 797 ntBASIC4.79□□□□□ -1.64
CTNNA1P35221 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.79□□□□□ -1.64
CTNNA1P35221 SCARNA10-201ENST00000459255 330 ntBASIC4.79□□□□□ -1.64
CTNNA1P35221 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC4.79□□□□□ -1.64
CTNNA1P35221 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC4.79□□□□□ -1.64
CTNNA1P35221 PRELID3BP7-201ENST00000503606 469 ntBASIC4.79□□□□□ -1.64
CTNNA1P35221 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC4.79□□□□□ -1.64
CTNNA1P35221 AC010468.3-201ENST00000508225 458 ntBASIC4.79□□□□□ -1.64
CTNNA1P35221 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC4.79□□□□□ -1.64
CTNNA1P35221 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.79□□□□□ -1.64
CTNNA1P35221 AC005351.1-201ENST00000511152 786 ntBASIC4.79□□□□□ -1.64
CTNNA1P35221 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC4.79□□□□□ -1.64
CTNNA1P35221 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.79□□□□□ -1.64
CTNNA1P35221 ADAD1P2-201ENST00000588476 646 ntBASIC4.79□□□□□ -1.64
CTNNA1P35221 BNIP3P32-201ENST00000600015 554 ntBASIC4.79□□□□□ -1.64
CTNNA1P35221 AF230666.2-201ENST00000602328 725 ntBASIC4.79□□□□□ -1.64
CTNNA1P35221 AC125494.3-201ENST00000602759 455 ntBASIC4.79□□□□□ -1.64
CTNNA1P35221 AC090181.2-201ENST00000602975 672 ntBASIC4.79□□□□□ -1.64
CTNNA1P35221 AC010201.1-201ENST00000605051 540 ntBASIC4.79□□□□□ -1.64
CTNNA1P35221 MIR6864-201ENST00000617935 70 ntBASIC4.79□□□□□ -1.64
CTNNA1P35221 AC091905.2-201ENST00000623143 306 ntBASIC4.79□□□□□ -1.64
CTNNA1P35221 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC4.79□□□□□ -1.64
CTNNA1P35221 AC125257.1-201ENST00000560400 2930 ntBASIC4.79□□□□□ -1.64
CTNNA1P35221 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
CTNNA1P35221 Z98755.1-201ENST00000407015 1384 ntBASIC4.78□□□□□ -1.64
CTNNA1P35221 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.78□□□□□ -1.64
CTNNA1P35221 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CTNNA1P35221 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CTNNA1P35221 KARSP3-201ENST00000571212 1504 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms