Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 SDHCP2-201ENST00000398565 501 ntBASIC5.24□□□□□ -1.57
CIITAP33076 Z98745.1-201ENST00000402553 494 ntBASIC5.24□□□□□ -1.57
CIITAP33076 XKRYP4-201ENST00000414395 483 ntBASIC5.24□□□□□ -1.57
CIITAP33076 SLC4A1APP1-201ENST00000419995 602 ntBASIC5.24□□□□□ -1.57
CIITAP33076 AC092634.2-201ENST00000428146 1010 ntBASIC5.24□□□□□ -1.57
CIITAP33076 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC5.24□□□□□ -1.57
CIITAP33076 FABP5P3-201ENST00000437960 408 ntBASIC5.24□□□□□ -1.57
CIITAP33076 FHP1-201ENST00000442741 703 ntBASIC5.24□□□□□ -1.57
CIITAP33076 CEACAMP9-201ENST00000442990 513 ntBASIC5.24□□□□□ -1.57
CIITAP33076 CASP3P1-201ENST00000446037 609 ntBASIC5.24□□□□□ -1.57
CIITAP33076 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC5.24□□□□□ -1.57
CIITAP33076 AL031313.1-201ENST00000448435 256 ntBASIC5.24□□□□□ -1.57
CIITAP33076 XKRYP5-201ENST00000449659 483 ntBASIC5.24□□□□□ -1.57
CIITAP33076 AL354710.1-201ENST00000453641 246 ntBASIC5.24□□□□□ -1.57
CIITAP33076 ISCUP1-201ENST00000454451 448 ntBASIC5.24□□□□□ -1.57
CIITAP33076 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
CIITAP33076 RN7SL354P-201ENST00000469282 294 ntBASIC5.24□□□□□ -1.57
CIITAP33076 AC020898.1-201ENST00000474167 787 ntBASIC5.24□□□□□ -1.57
CIITAP33076 AC104763.1-201ENST00000475274 360 ntBASIC5.24□□□□□ -1.57
CIITAP33076 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC5.24□□□□□ -1.57
CIITAP33076 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC5.24□□□□□ -1.57
CIITAP33076 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC5.24□□□□□ -1.57
CIITAP33076 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC5.24□□□□□ -1.57
CIITAP33076 DUXAP5-201ENST00000529668 529 ntBASIC5.24□□□□□ -1.57
CIITAP33076 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC5.24□□□□□ -1.57
CIITAP33076 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.24□□□□□ -1.57
CIITAP33076 AC015912.2-201ENST00000571053 181 ntBASIC5.24□□□□□ -1.57
CIITAP33076 AP005262.1-201ENST00000582646 997 ntBASIC5.24□□□□□ -1.57
CIITAP33076 MIR3936-201ENST00000584304 110 ntBASIC5.24□□□□□ -1.57
CIITAP33076 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC5.24□□□□□ -1.57
CIITAP33076 AL137072.1-201ENST00000603444 466 ntBASIC5.24□□□□□ -1.57
CIITAP33076 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC5.24□□□□□ -1.57
CIITAP33076 AC106052.1-201ENST00000608029 497 ntBASIC5.24□□□□□ -1.57
CIITAP33076 AC093673.2-201ENST00000609674 331 ntBASIC5.24□□□□□ -1.57
CIITAP33076 AC009464.1-201ENST00000615731 469 ntBASIC5.24□□□□□ -1.57
CIITAP33076 AL359757.1-201ENST00000623176 255 ntBASIC5.24□□□□□ -1.57
CIITAP33076 AP002967.1-201ENST00000624203 539 ntBASIC5.24□□□□□ -1.57
CIITAP33076 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC5.24□□□□□ -1.57
CIITAP33076 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC5.24□□□□□ -1.57
CIITAP33076 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC5.24□□□□□ -1.57
CIITAP33076 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
CIITAP33076 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
CIITAP33076 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CIITAP33076 BTBD10P1-201ENST00000549824 1352 ntBASIC5.24□□□□□ -1.57
CIITAP33076 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
CIITAP33076 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
CIITAP33076 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.24□□□□□ -1.57
CIITAP33076 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CIITAP33076 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
CIITAP33076 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.24□□□□□ -1.57
CIITAP33076 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.24□□□□□ -1.57
CIITAP33076 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
CIITAP33076 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CIITAP33076 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
CIITAP33076 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
CIITAP33076 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
CIITAP33076 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC5.23□□□□□ -1.57
CIITAP33076 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CIITAP33076 BX005019.1-201ENST00000561881 1810 ntBASIC5.23□□□□□ -1.57
CIITAP33076 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
CIITAP33076 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.23□□□□□ -1.57
CIITAP33076 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
CIITAP33076 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CIITAP33076 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
CIITAP33076 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CIITAP33076 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CIITAP33076 OR56B2P-201ENST00000317102 954 ntBASIC5.23□□□□□ -1.57
CIITAP33076 SNORD56.4-201ENST00000363883 71 ntBASIC5.23□□□□□ -1.57
CIITAP33076 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC5.23□□□□□ -1.57
CIITAP33076 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
CIITAP33076 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
CIITAP33076 AL080315.1-201ENST00000406055 466 ntBASIC5.23□□□□□ -1.57
CIITAP33076 CETN4P-201ENST00000432407 469 ntBASIC5.23□□□□□ -1.57
CIITAP33076 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC5.23□□□□□ -1.57
CIITAP33076 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC5.23□□□□□ -1.57
CIITAP33076 RPS27P5-201ENST00000444247 244 ntBASIC5.23□□□□□ -1.57
CIITAP33076 MTATP6P26-201ENST00000445926 662 ntBASIC5.23□□□□□ -1.57
CIITAP33076 AL589765.3-201ENST00000446084 462 ntBASIC5.23□□□□□ -1.57
CIITAP33076 HMGB1P5-202ENST00000451497 985 ntBASIC5.23□□□□□ -1.57
CIITAP33076 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CIITAP33076 OR52A4P-201ENST00000472867 958 ntBASIC5.23□□□□□ -1.57
CIITAP33076 METTL15P1-201ENST00000481421 1045 ntBASIC5.23□□□□□ -1.57
CIITAP33076 AC093890.1-201ENST00000502554 540 ntBASIC5.23□□□□□ -1.57
CIITAP33076 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC5.23□□□□□ -1.57
CIITAP33076 AC098799.3-201ENST00000506095 438 ntBASIC5.23□□□□□ -1.57
CIITAP33076 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC5.23□□□□□ -1.57
CIITAP33076 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC5.23□□□□□ -1.57
CIITAP33076 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC5.23□□□□□ -1.57
CIITAP33076 AP001636.2-201ENST00000525517 696 ntBASIC5.23□□□□□ -1.57
CIITAP33076 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC5.23□□□□□ -1.57
CIITAP33076 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.23□□□□□ -1.57
CIITAP33076 OR8K4P-201ENST00000534608 872 ntBASIC5.23□□□□□ -1.57
CIITAP33076 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC5.23□□□□□ -1.57
CIITAP33076 AC010735.1-201ENST00000567305 1026 ntBASIC5.23□□□□□ -1.57
CIITAP33076 SS18L2P2-201ENST00000583960 235 ntBASIC5.23□□□□□ -1.57
CIITAP33076 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC5.23□□□□□ -1.57
CIITAP33076 AC124856.1-201ENST00000600819 896 ntBASIC5.23□□□□□ -1.57
CIITAP33076 AC234772.3-201ENST00000602277 528 ntBASIC5.23□□□□□ -1.57
CIITAP33076 AL133338.2-201ENST00000604292 736 ntBASIC5.23□□□□□ -1.57
CIITAP33076 AC245100.7-201ENST00000609678 442 ntBASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms