Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC5.35□□□□□ -1.55
SLC6A4P31645 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.35□□□□□ -1.55
SLC6A4P31645 VN1R90P-201ENST00000595717 726 ntBASIC5.35□□□□□ -1.55
SLC6A4P31645 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.35□□□□□ -1.55
SLC6A4P31645 AC064872.1-201ENST00000604823 1072 ntBASIC5.35□□□□□ -1.55
SLC6A4P31645 AC010738.1-201ENST00000604970 987 ntBASIC5.35□□□□□ -1.55
SLC6A4P31645 MIR6748-201ENST00000610433 71 ntBASIC5.35□□□□□ -1.55
SLC6A4P31645 AC009163.6-201ENST00000612367 342 ntBASIC5.35□□□□□ -1.55
SLC6A4P31645 AC023158.2-201ENST00000614876 543 ntBASIC5.35□□□□□ -1.55
SLC6A4P31645 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC5.35□□□□□ -1.55
SLC6A4P31645 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.35□□□□□ -1.55
SLC6A4P31645 AC068870.2-201ENST00000620635 389 ntBASIC5.35□□□□□ -1.55
SLC6A4P31645 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC5.35□□□□□ -1.55
SLC6A4P31645 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC5.35□□□□□ -1.55
SLC6A4P31645 FP325313.1-201ENST00000638228 703 ntBASIC5.35□□□□□ -1.55
SLC6A4P31645 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SLC6A4P31645 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SLC6A4P31645 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
SLC6A4P31645 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SLC6A4P31645 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
SLC6A4P31645 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SLC6A4P31645 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SLC6A4P31645 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
SLC6A4P31645 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.34□□□□□ -1.55
SLC6A4P31645 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.34□□□□□ -1.55
SLC6A4P31645 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SLC6A4P31645 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.34□□□□□ -1.55
SLC6A4P31645 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SLC6A4P31645 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
SLC6A4P31645 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.34□□□□□ -1.55
SLC6A4P31645 MAPK6PS3-201ENST00000403865 2162 ntBASIC5.34□□□□□ -1.55
SLC6A4P31645 IGKV7-3-201ENST00000357453 298 ntBASIC5.34□□□□□ -1.55
SLC6A4P31645 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SLC6A4P31645 RNU1-74P-201ENST00000384108 171 ntBASIC5.34□□□□□ -1.55
SLC6A4P31645 SNORA5.1-201ENST00000384275 131 ntBASIC5.34□□□□□ -1.55
SLC6A4P31645 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
SLC6A4P31645 HMGB3P7-201ENST00000400214 611 ntBASIC5.34□□□□□ -1.55
SLC6A4P31645 Y_RNA.625-201ENST00000411256 107 ntBASIC5.34□□□□□ -1.55
SLC6A4P31645 AL031779.1-201ENST00000415663 330 ntBASIC5.34□□□□□ -1.55
SLC6A4P31645 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC5.34□□□□□ -1.55
SLC6A4P31645 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC5.34□□□□□ -1.55
SLC6A4P31645 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC5.34□□□□□ -1.55
SLC6A4P31645 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC5.34□□□□□ -1.55
SLC6A4P31645 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC5.34□□□□□ -1.55
SLC6A4P31645 AC129850.1-201ENST00000436203 508 ntBASIC5.34□□□□□ -1.55
SLC6A4P31645 AL772161.1-201ENST00000439130 476 ntBASIC5.34□□□□□ -1.55
SLC6A4P31645 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC5.34□□□□□ -1.55
SLC6A4P31645 RPS26P30-201ENST00000443431 335 ntBASIC5.34□□□□□ -1.55
SLC6A4P31645 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC5.34□□□□□ -1.55
SLC6A4P31645 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC5.34□□□□□ -1.55
SLC6A4P31645 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC5.34□□□□□ -1.55
SLC6A4P31645 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC5.34□□□□□ -1.55
SLC6A4P31645 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC5.34□□□□□ -1.55
SLC6A4P31645 AC008885.2-201ENST00000509506 930 ntBASIC5.34□□□□□ -1.55
SLC6A4P31645 AC010587.2-201ENST00000511727 448 ntBASIC5.34□□□□□ -1.55
SLC6A4P31645 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
SLC6A4P31645 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC5.34□□□□□ -1.55
SLC6A4P31645 RN7SKP66-201ENST00000516681 231 ntBASIC5.34□□□□□ -1.55
SLC6A4P31645 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.34□□□□□ -1.55
SLC6A4P31645 NAP1L1P1-201ENST00000524793 1063 ntBASIC5.34□□□□□ -1.55
SLC6A4P31645 AC005832.3-201ENST00000537929 631 ntBASIC5.34□□□□□ -1.55
SLC6A4P31645 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.34□□□□□ -1.55
SLC6A4P31645 AC092490.3-201ENST00000545370 572 ntBASIC5.34□□□□□ -1.55
SLC6A4P31645 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC5.34□□□□□ -1.55
SLC6A4P31645 HIGD1AP17-201ENST00000554576 276 ntBASIC5.34□□□□□ -1.55
SLC6A4P31645 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.34□□□□□ -1.55
SLC6A4P31645 AC116553.2-201ENST00000564203 463 ntBASIC5.34□□□□□ -1.55
SLC6A4P31645 ACTR3BP3-201ENST00000565577 979 ntBASIC5.34□□□□□ -1.55
SLC6A4P31645 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC5.34□□□□□ -1.55
SLC6A4P31645 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.34□□□□□ -1.55
SLC6A4P31645 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.34□□□□□ -1.55
SLC6A4P31645 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC5.34□□□□□ -1.55
SLC6A4P31645 AC006539.2-201ENST00000601729 572 ntBASIC5.34□□□□□ -1.55
SLC6A4P31645 AP005432.2-201ENST00000608162 586 ntBASIC5.34□□□□□ -1.55
SLC6A4P31645 AL133243.1-201ENST00000614487 366 ntBASIC5.34□□□□□ -1.55
SLC6A4P31645 MIR7973-1-201ENST00000614683 76 ntBASIC5.34□□□□□ -1.55
SLC6A4P31645 AC090510.2-201ENST00000617465 629 ntBASIC5.34□□□□□ -1.55
SLC6A4P31645 MIR6839-201ENST00000620425 113 ntBASIC5.34□□□□□ -1.55
SLC6A4P31645 AL359715.5-201ENST00000623431 443 ntBASIC5.34□□□□□ -1.55
SLC6A4P31645 AF246928.1-201ENST00000623768 87 ntBASIC5.34□□□□□ -1.55
SLC6A4P31645 AC091965.5-201ENST00000624785 342 ntBASIC5.34□□□□□ -1.55
SLC6A4P31645 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.34□□□□□ -1.55
SLC6A4P31645 TEX41-254ENST00000626394 423 ntTSL 5 BASIC5.34□□□□□ -1.55
SLC6A4P31645 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC5.34□□□□□ -1.55
SLC6A4P31645 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SLC6A4P31645 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.34□□□□□ -1.55
SLC6A4P31645 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SLC6A4P31645 AC068870.3-201ENST00000625077 2536 ntBASIC5.34□□□□□ -1.56
SLC6A4P31645 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.34□□□□□ -1.56
SLC6A4P31645 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.34□□□□□ -1.56
SLC6A4P31645 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.34□□□□□ -1.56
SLC6A4P31645 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SLC6A4P31645 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
SLC6A4P31645 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SLC6A4P31645 AL031595.2-201ENST00000624215 19071 ntBASIC5.33□□□□□ -1.56
SLC6A4P31645 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC5.33□□□□□ -1.56
SLC6A4P31645 GVINP1-202ENST00000531871 7271 ntBASIC5.33□□□□□ -1.56
SLC6A4P31645 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
SLC6A4P31645 HSPA8P18-201ENST00000439846 1928 ntBASIC5.33□□□□□ -1.56
SLC6A4P31645 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms