Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC5.69□□□□□ -1.5
CPS1P31327 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC5.69□□□□□ -1.5
CPS1P31327 AL591473.1-201ENST00000464297 313 ntBASIC5.69□□□□□ -1.5
CPS1P31327 RPL23AP65-201ENST00000475608 468 ntBASIC5.69□□□□□ -1.5
CPS1P31327 MTND6P6-201ENST00000478031 263 ntBASIC5.69□□□□□ -1.5
CPS1P31327 PRELID3BP6-201ENST00000503839 571 ntBASIC5.69□□□□□ -1.5
CPS1P31327 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC5.69□□□□□ -1.5
CPS1P31327 SCARNA14-201ENST00000516903 136 ntBASIC5.69□□□□□ -1.5
CPS1P31327 AC087369.1-201ENST00000520775 996 ntBASIC5.69□□□□□ -1.5
CPS1P31327 QTRT1P1-201ENST00000604344 1078 ntBASIC5.69□□□□□ -1.5
CPS1P31327 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.69□□□□□ -1.5
CPS1P31327 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.69□□□□□ -1.5
CPS1P31327 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CPS1P31327 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CPS1P31327 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
CPS1P31327 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
CPS1P31327 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.69□□□□□ -1.5
CPS1P31327 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CPS1P31327 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
CPS1P31327 U1.1-201ENST00000384101 164 ntBASIC5.69□□□□□ -1.5
CPS1P31327 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
CPS1P31327 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CPS1P31327 AL031584.1-201ENST00000447169 754 ntBASIC5.69□□□□□ -1.5
CPS1P31327 EIF4A1P11-201ENST00000451239 222 ntBASIC5.69□□□□□ -1.5
CPS1P31327 CYCSP53-201ENST00000455540 265 ntBASIC5.69□□□□□ -1.5
CPS1P31327 RPL37P3-201ENST00000456825 293 ntBASIC5.69□□□□□ -1.5
CPS1P31327 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC5.69□□□□□ -1.5
CPS1P31327 HMGN1P11-201ENST00000508668 303 ntBASIC5.69□□□□□ -1.5
CPS1P31327 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC5.69□□□□□ -1.5
CPS1P31327 AC091516.1-201ENST00000549191 703 ntBASIC5.69□□□□□ -1.5
CPS1P31327 CFL2-206ENST00000556161 546 ntTSL 4 BASIC5.69□□□□□ -1.5
CPS1P31327 MIR4472-2-201ENST00000582069 67 ntBASIC5.69□□□□□ -1.5
CPS1P31327 AC011816.2-201ENST00000607089 556 ntBASIC5.69□□□□□ -1.5
CPS1P31327 AC019278.1-201ENST00000623516 479 ntBASIC5.69□□□□□ -1.5
CPS1P31327 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC5.69□□□□□ -1.5
CPS1P31327 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CPS1P31327 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CPS1P31327 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC5.68□□□□□ -1.5
CPS1P31327 EEF1A1P42-201ENST00000613436 1331 ntBASIC5.68□□□□□ -1.5
CPS1P31327 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CPS1P31327 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CPS1P31327 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
CPS1P31327 RNA5SP399-201ENST00000364003 117 ntBASIC5.68□□□□□ -1.5
CPS1P31327 U3.26-201ENST00000391236 204 ntBASIC5.68□□□□□ -1.5
CPS1P31327 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC5.68□□□□□ -1.5
CPS1P31327 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC5.68□□□□□ -1.5
CPS1P31327 AL391219.1-201ENST00000422570 483 ntBASIC5.68□□□□□ -1.5
CPS1P31327 PRELID3BP10-201ENST00000431957 584 ntBASIC5.68□□□□□ -1.5
CPS1P31327 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC5.68□□□□□ -1.5
CPS1P31327 AC108022.1-201ENST00000493466 478 ntBASIC5.68□□□□□ -1.5
CPS1P31327 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC5.68□□□□□ -1.5
CPS1P31327 FTH1P9-201ENST00000513251 355 ntBASIC5.68□□□□□ -1.5
CPS1P31327 AC138938.1-201ENST00000515431 782 ntBASIC5.68□□□□□ -1.5
CPS1P31327 AC027176.2-201ENST00000559166 746 ntBASIC5.68□□□□□ -1.5
CPS1P31327 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC5.68□□□□□ -1.5
CPS1P31327 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CPS1P31327 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CPS1P31327 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC5.68□□□□□ -1.5
CPS1P31327 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
CPS1P31327 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CPS1P31327 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.67□□□□□ -1.5
CPS1P31327 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC5.67□□□□□ -1.5
CPS1P31327 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CPS1P31327 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CPS1P31327 AC005261.2-201ENST00000593427 4258 ntBASIC5.67□□□□□ -1.5
CPS1P31327 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CPS1P31327 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CPS1P31327 CYCSP35-201ENST00000451978 304 ntBASIC5.67□□□□□ -1.5
CPS1P31327 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC5.67□□□□□ -1.5
CPS1P31327 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC5.67□□□□□ -1.5
CPS1P31327 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CPS1P31327 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC5.67□□□□□ -1.5
CPS1P31327 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
CPS1P31327 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
CPS1P31327 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC5.66□□□□□ -1.5
CPS1P31327 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
CPS1P31327 HMGB3P19-201ENST00000403971 560 ntBASIC5.66□□□□□ -1.5
CPS1P31327 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC5.66□□□□□ -1.5
CPS1P31327 AC083863.1-201ENST00000438811 231 ntBASIC5.66□□□□□ -1.5
CPS1P31327 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC5.66□□□□□ -1.5
CPS1P31327 AC005726.1-201ENST00000494679 427 ntBASIC5.66□□□□□ -1.5
CPS1P31327 SETP14-201ENST00000497538 873 ntBASIC5.66□□□□□ -1.5
CPS1P31327 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC5.66□□□□□ -1.5
CPS1P31327 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC5.66□□□□□ -1.5
CPS1P31327 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC5.66□□□□□ -1.5
CPS1P31327 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC5.66□□□□□ -1.5
CPS1P31327 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC5.66□□□□□ -1.5
CPS1P31327 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC5.66□□□□□ -1.5
CPS1P31327 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC5.66□□□□□ -1.5
CPS1P31327 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC5.66□□□□□ -1.5
CPS1P31327 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
CPS1P31327 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC5.66□□□□□ -1.5
CPS1P31327 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CPS1P31327 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CPS1P31327 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
CPS1P31327 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CPS1P31327 AC093591.2-201ENST00000565254 3843 ntBASIC5.66□□□□□ -1.5
CPS1P31327 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
CPS1P31327 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CPS1P31327 MARK2P15-201ENST00000432204 2186 ntBASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms