Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.94□□□□□ -1.62
HOXC8P31273 HMGN1P15-201ENST00000513870 295 ntBASIC4.94□□□□□ -1.62
HOXC8P31273 RN7SKP157-201ENST00000516174 282 ntBASIC4.94□□□□□ -1.62
HOXC8P31273 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HOXC8P31273 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.94□□□□□ -1.62
HOXC8P31273 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HOXC8P31273 AC107918.3-201ENST00000533272 382 ntBASIC4.94□□□□□ -1.62
HOXC8P31273 OSBPL9P3-201ENST00000534523 595 ntBASIC4.94□□□□□ -1.62
HOXC8P31273 NELL2-211ENST00000548826 559 ntTSL 2 BASIC4.94□□□□□ -1.62
HOXC8P31273 DNAJC19P3-201ENST00000594491 331 ntBASIC4.94□□□□□ -1.62
HOXC8P31273 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HOXC8P31273 AP003117.1-201ENST00000602771 554 ntBASIC4.94□□□□□ -1.62
HOXC8P31273 AL671309.1-201ENST00000603750 544 ntBASIC4.94□□□□□ -1.62
HOXC8P31273 uc_338.13-201ENST00000618243 179 ntBASIC4.94□□□□□ -1.62
HOXC8P31273 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
HOXC8P31273 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
HOXC8P31273 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HOXC8P31273 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
HOXC8P31273 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC4.94□□□□□ -1.62
HOXC8P31273 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
HOXC8P31273 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HOXC8P31273 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HOXC8P31273 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HOXC8P31273 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HOXC8P31273 AL136520.1-201ENST00000600311 1322 ntBASIC4.94□□□□□ -1.62
HOXC8P31273 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC4.93□□□□□ -1.62
HOXC8P31273 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
HOXC8P31273 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
HOXC8P31273 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.93□□□□□ -1.62
HOXC8P31273 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
HOXC8P31273 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
HOXC8P31273 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
HOXC8P31273 AC073136.1-201ENST00000449426 2884 ntBASIC4.93□□□□□ -1.62
HOXC8P31273 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
HOXC8P31273 NAP1L4P1-201ENST00000319092 1157 ntBASIC4.93□□□□□ -1.62
HOXC8P31273 RNU4-44P-201ENST00000363050 141 ntBASIC4.93□□□□□ -1.62
HOXC8P31273 MIR92A2-201ENST00000385299 75 ntBASIC4.93□□□□□ -1.62
HOXC8P31273 AL512430.2-201ENST00000406786 339 ntBASIC4.93□□□□□ -1.62
HOXC8P31273 GSTM3P2-201ENST00000412746 530 ntBASIC4.93□□□□□ -1.62
HOXC8P31273 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC4.93□□□□□ -1.62
HOXC8P31273 SLC4A1APP1-201ENST00000419995 602 ntBASIC4.93□□□□□ -1.62
HOXC8P31273 ARL2BPP3-201ENST00000421226 480 ntBASIC4.93□□□□□ -1.62
HOXC8P31273 RPS12P10-201ENST00000427031 377 ntBASIC4.93□□□□□ -1.62
HOXC8P31273 HMGN2P27-201ENST00000427352 270 ntBASIC4.93□□□□□ -1.62
HOXC8P31273 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.93□□□□□ -1.62
HOXC8P31273 NMNAT1P2-201ENST00000435192 860 ntBASIC4.93□□□□□ -1.62
HOXC8P31273 AC114495.1-201ENST00000441274 436 ntBASIC4.93□□□□□ -1.62
HOXC8P31273 TDGF1P1-201ENST00000445734 527 ntBASIC4.93□□□□□ -1.62
HOXC8P31273 AC105137.1-201ENST00000484355 562 ntBASIC4.93□□□□□ -1.62
HOXC8P31273 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.93□□□□□ -1.62
HOXC8P31273 AC005912.1-201ENST00000495392 255 ntBASIC4.93□□□□□ -1.62
HOXC8P31273 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
HOXC8P31273 AC010468.3-201ENST00000508225 458 ntBASIC4.93□□□□□ -1.62
HOXC8P31273 RNU6-347P-201ENST00000516658 105 ntBASIC4.93□□□□□ -1.62
HOXC8P31273 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC4.93□□□□□ -1.62
HOXC8P31273 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.93□□□□□ -1.62
HOXC8P31273 AC126365.2-201ENST00000580630 379 ntBASIC4.93□□□□□ -1.62
HOXC8P31273 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.93□□□□□ -1.62
HOXC8P31273 ARF4P1-201ENST00000605447 541 ntBASIC4.93□□□□□ -1.62
HOXC8P31273 AC055764.2-201ENST00000610089 670 ntBASIC4.93□□□□□ -1.62
HOXC8P31273 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
HOXC8P31273 AC016957.2-201ENST00000616998 848 ntBASIC4.93□□□□□ -1.62
HOXC8P31273 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC4.93□□□□□ -1.62
HOXC8P31273 AC022306.3-201ENST00000619930 550 ntBASIC4.93□□□□□ -1.62
HOXC8P31273 AC015908.5-201ENST00000623289 343 ntBASIC4.93□□□□□ -1.62
HOXC8P31273 AC015726.3-201ENST00000624501 418 ntBASIC4.93□□□□□ -1.62
HOXC8P31273 SCN1A-220ENST00000641603 12506 ntBASIC4.93□□□□□ -1.62
HOXC8P31273 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.93□□□□□ -1.62
HOXC8P31273 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
HOXC8P31273 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
HOXC8P31273 AL592182.3-201ENST00000642132 3304 ntBASIC4.92□□□□□ -1.62
HOXC8P31273 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
HOXC8P31273 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC4.92□□□□□ -1.62
HOXC8P31273 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.92□□□□□ -1.62
HOXC8P31273 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
HOXC8P31273 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC4.92□□□□□ -1.62
HOXC8P31273 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
HOXC8P31273 RNA5SP388-201ENST00000362584 119 ntBASIC4.92□□□□□ -1.62
HOXC8P31273 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC4.92□□□□□ -1.62
HOXC8P31273 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
HOXC8P31273 RNA5SP317-201ENST00000410176 116 ntBASIC4.92□□□□□ -1.62
HOXC8P31273 RNA5SP311-201ENST00000411290 116 ntBASIC4.92□□□□□ -1.62
HOXC8P31273 XKRYP4-201ENST00000414395 483 ntBASIC4.92□□□□□ -1.62
HOXC8P31273 LINC01881-201ENST00000416103 412 ntBASIC4.92□□□□□ -1.62
HOXC8P31273 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.92□□□□□ -1.62
HOXC8P31273 AC009965.2-201ENST00000425328 970 ntBASIC4.92□□□□□ -1.62
HOXC8P31273 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC4.92□□□□□ -1.62
HOXC8P31273 OR4C10P-201ENST00000434991 931 ntBASIC4.92□□□□□ -1.62
HOXC8P31273 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC4.92□□□□□ -1.62
HOXC8P31273 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC4.92□□□□□ -1.62
HOXC8P31273 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.92□□□□□ -1.62
HOXC8P31273 XKRYP5-201ENST00000449659 483 ntBASIC4.92□□□□□ -1.62
HOXC8P31273 AC005229.2-201ENST00000456995 399 ntBASIC4.92□□□□□ -1.62
HOXC8P31273 CCDC75P1-201ENST00000469247 791 ntBASIC4.92□□□□□ -1.62
HOXC8P31273 NPM1P29-201ENST00000483112 803 ntBASIC4.92□□□□□ -1.62
HOXC8P31273 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.92□□□□□ -1.62
HOXC8P31273 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC4.92□□□□□ -1.62
HOXC8P31273 AC010374.2-201ENST00000512933 535 ntBASIC4.92□□□□□ -1.62
HOXC8P31273 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.92□□□□□ -1.62
HOXC8P31273 MTCO1P35-201ENST00000515270 228 ntBASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms