Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 AL133243.3-201ENST00000617415 3004 ntBASIC4.31□□□□□ -1.72
PTPN6P29350 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PTPN6P29350 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.31□□□□□ -1.72
PTPN6P29350 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PTPN6P29350 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PTPN6P29350 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.31□□□□□ -1.72
PTPN6P29350 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
PTPN6P29350 NOL8P1-201ENST00000508336 3529 ntBASIC4.3□□□□□ -1.72
PTPN6P29350 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PTPN6P29350 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PTPN6P29350 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
PTPN6P29350 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.3□□□□□ -1.72
PTPN6P29350 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PTPN6P29350 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
PTPN6P29350 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PTPN6P29350 RPS4XP9-201ENST00000405151 780 ntBASIC4.3□□□□□ -1.72
PTPN6P29350 FAR2P2-201ENST00000413041 594 ntBASIC4.3□□□□□ -1.72
PTPN6P29350 RAD23BP1-201ENST00000421404 1227 ntBASIC4.3□□□□□ -1.72
PTPN6P29350 FAR2P4-202ENST00000425399 584 ntBASIC4.3□□□□□ -1.72
PTPN6P29350 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.3□□□□□ -1.72
PTPN6P29350 MED6P1-201ENST00000439659 713 ntBASIC4.3□□□□□ -1.72
PTPN6P29350 AL138878.2-201ENST00000440581 1241 ntBASIC4.3□□□□□ -1.72
PTPN6P29350 AC007000.2-201ENST00000442564 487 ntBASIC4.3□□□□□ -1.72
PTPN6P29350 RPS27AP15-201ENST00000447672 466 ntBASIC4.3□□□□□ -1.72
PTPN6P29350 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.3□□□□□ -1.72
PTPN6P29350 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.3□□□□□ -1.72
PTPN6P29350 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.3□□□□□ -1.72
PTPN6P29350 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
PTPN6P29350 RN7SL738P-201ENST00000470264 297 ntBASIC4.3□□□□□ -1.72
PTPN6P29350 RPL12P20-201ENST00000475538 479 ntBASIC4.3□□□□□ -1.72
PTPN6P29350 RN7SL205P-201ENST00000490174 284 ntBASIC4.3□□□□□ -1.72
PTPN6P29350 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.3□□□□□ -1.72
PTPN6P29350 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC4.3□□□□□ -1.72
PTPN6P29350 RN7SKP141-201ENST00000516167 338 ntBASIC4.3□□□□□ -1.72
PTPN6P29350 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC4.3□□□□□ -1.72
PTPN6P29350 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.3□□□□□ -1.72
PTPN6P29350 OR5M2P-201ENST00000529003 936 ntBASIC4.3□□□□□ -1.72
PTPN6P29350 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.3□□□□□ -1.72
PTPN6P29350 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.3□□□□□ -1.72
PTPN6P29350 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PTPN6P29350 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.3□□□□□ -1.72
PTPN6P29350 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC4.3□□□□□ -1.72
PTPN6P29350 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC4.3□□□□□ -1.72
PTPN6P29350 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.3□□□□□ -1.72
PTPN6P29350 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC4.3□□□□□ -1.72
PTPN6P29350 AC115621.1-201ENST00000604653 858 ntBASIC4.3□□□□□ -1.72
PTPN6P29350 AC023509.5-201ENST00000617434 807 ntBASIC4.3□□□□□ -1.72
PTPN6P29350 RN7SL722P-201ENST00000617780 284 ntBASIC4.3□□□□□ -1.72
PTPN6P29350 RN7SL565P-201ENST00000618246 284 ntBASIC4.3□□□□□ -1.72
PTPN6P29350 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC4.3□□□□□ -1.72
PTPN6P29350 MIR7703-201ENST00000620784 77 ntBASIC4.3□□□□□ -1.72
PTPN6P29350 AC091905.2-201ENST00000623143 306 ntBASIC4.3□□□□□ -1.72
PTPN6P29350 AC091948.2-201ENST00000636510 279 ntBASIC4.3□□□□□ -1.72
PTPN6P29350 METTL8-219ENST00000640734 726 ntTSL 2 BASIC4.3□□□□□ -1.72
PTPN6P29350 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
PTPN6P29350 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PTPN6P29350 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PTPN6P29350 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.3□□□□□ -1.72
PTPN6P29350 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
PTPN6P29350 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PTPN6P29350 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.29□□□□□ -1.72
PTPN6P29350 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.29□□□□□ -1.72
PTPN6P29350 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
PTPN6P29350 AC090229.1-201ENST00000590983 1609 ntBASIC4.29□□□□□ -1.72
PTPN6P29350 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.29□□□□□ -1.72
PTPN6P29350 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.29□□□□□ -1.72
PTPN6P29350 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
PTPN6P29350 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
PTPN6P29350 OR10J6P-201ENST00000289731 930 ntBASIC4.29□□□□□ -1.72
PTPN6P29350 RNA5SP22-201ENST00000365393 109 ntBASIC4.29□□□□□ -1.72
PTPN6P29350 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PTPN6P29350 RNU1-63P-201ENST00000383902 164 ntBASIC4.29□□□□□ -1.72
PTPN6P29350 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
PTPN6P29350 RPS16P5-201ENST00000406501 404 ntBASIC4.29□□□□□ -1.72
PTPN6P29350 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PTPN6P29350 ATG4AP1-201ENST00000416893 538 ntBASIC4.29□□□□□ -1.72
PTPN6P29350 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
PTPN6P29350 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC4.29□□□□□ -1.72
PTPN6P29350 AL513321.1-201ENST00000441175 761 ntBASIC4.29□□□□□ -1.72
PTPN6P29350 AC073587.1-201ENST00000447093 876 ntBASIC4.29□□□□□ -1.72
PTPN6P29350 TPT1P13-201ENST00000449760 499 ntBASIC4.29□□□□□ -1.72
PTPN6P29350 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.29□□□□□ -1.72
PTPN6P29350 RPS29P33-201ENST00000456717 146 ntBASIC4.29□□□□□ -1.72
PTPN6P29350 AC011037.1-201ENST00000483964 558 ntBASIC4.29□□□□□ -1.72
PTPN6P29350 CEACAMP10-202ENST00000495431 496 ntBASIC4.29□□□□□ -1.72
PTPN6P29350 AC083829.1-201ENST00000503756 657 ntBASIC4.29□□□□□ -1.72
PTPN6P29350 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC4.29□□□□□ -1.72
PTPN6P29350 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.29□□□□□ -1.72
PTPN6P29350 OR51K1P-201ENST00000510214 950 ntBASIC4.29□□□□□ -1.72
PTPN6P29350 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.29□□□□□ -1.72
PTPN6P29350 AC108043.1-201ENST00000512696 574 ntBASIC4.29□□□□□ -1.72
PTPN6P29350 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.29□□□□□ -1.72
PTPN6P29350 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC4.29□□□□□ -1.72
PTPN6P29350 AC008694.2-201ENST00000517591 306 ntBASIC4.29□□□□□ -1.72
PTPN6P29350 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC4.29□□□□□ -1.72
PTPN6P29350 AC087272.1-201ENST00000523624 533 ntBASIC4.29□□□□□ -1.72
PTPN6P29350 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.29□□□□□ -1.72
PTPN6P29350 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC4.29□□□□□ -1.72
PTPN6P29350 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.29□□□□□ -1.72
PTPN6P29350 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 137.5 ms