Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
ABCD3P28288 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.72□□□□□ -1.65
ABCD3P28288 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
ABCD3P28288 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
ABCD3P28288 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
ABCD3P28288 RNA5SP507-201ENST00000363603 121 ntBASIC4.72□□□□□ -1.65
ABCD3P28288 RNU4-68P-201ENST00000364314 141 ntBASIC4.72□□□□□ -1.65
ABCD3P28288 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
ABCD3P28288 Y_RNA.472-201ENST00000384322 102 ntBASIC4.72□□□□□ -1.65
ABCD3P28288 RNU6-906P-201ENST00000384700 70 ntBASIC4.72□□□□□ -1.65
ABCD3P28288 MIR105-2-201ENST00000385083 81 ntBASIC4.72□□□□□ -1.65
ABCD3P28288 FABP12P1-201ENST00000401911 322 ntBASIC4.72□□□□□ -1.65
ABCD3P28288 TANK-203ENST00000402568 878 ntTSL 5 BASIC4.72□□□□□ -1.65
ABCD3P28288 SPTLC1P2-201ENST00000407089 121 ntBASIC4.72□□□□□ -1.65
ABCD3P28288 AL139098.1-201ENST00000407291 389 ntBASIC4.72□□□□□ -1.65
ABCD3P28288 RN7SKP213-201ENST00000410746 298 ntBASIC4.72□□□□□ -1.65
ABCD3P28288 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC4.72□□□□□ -1.65
ABCD3P28288 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC4.72□□□□□ -1.65
ABCD3P28288 AC010881.1-201ENST00000433830 235 ntBASIC4.72□□□□□ -1.65
ABCD3P28288 EEF1A1P39-201ENST00000440791 250 ntBASIC4.72□□□□□ -1.65
ABCD3P28288 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC4.72□□□□□ -1.65
ABCD3P28288 RPS26P56-201ENST00000444468 240 ntBASIC4.72□□□□□ -1.65
ABCD3P28288 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.72□□□□□ -1.65
ABCD3P28288 KNOP1P3-201ENST00000446933 426 ntBASIC4.72□□□□□ -1.65
ABCD3P28288 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
ABCD3P28288 RN7SL443P-201ENST00000464331 290 ntBASIC4.72□□□□□ -1.65
ABCD3P28288 RPSAP50-201ENST00000481955 852 ntBASIC4.72□□□□□ -1.65
ABCD3P28288 AC109462.1-201ENST00000491087 368 ntBASIC4.72□□□□□ -1.65
ABCD3P28288 AL049874.2-201ENST00000492636 288 ntBASIC4.72□□□□□ -1.65
ABCD3P28288 DYNLL1P6-201ENST00000503440 264 ntBASIC4.72□□□□□ -1.65
ABCD3P28288 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.72□□□□□ -1.65
ABCD3P28288 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC4.72□□□□□ -1.65
ABCD3P28288 RN7SKP260-201ENST00000516907 149 ntBASIC4.72□□□□□ -1.65
ABCD3P28288 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC4.72□□□□□ -1.65
ABCD3P28288 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4.72□□□□□ -1.65
ABCD3P28288 HMGN2P6-201ENST00000551091 273 ntBASIC4.72□□□□□ -1.65
ABCD3P28288 MTND1P24-201ENST00000552175 861 ntBASIC4.72□□□□□ -1.65
ABCD3P28288 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.72□□□□□ -1.65
ABCD3P28288 HNRNPCP4-201ENST00000571636 900 ntBASIC4.72□□□□□ -1.65
ABCD3P28288 PRPF19P1-201ENST00000584766 898 ntBASIC4.72□□□□□ -1.65
ABCD3P28288 AC013244.1-201ENST00000604279 193 ntBASIC4.72□□□□□ -1.65
ABCD3P28288 AL355816.2-201ENST00000610049 647 ntBASIC4.72□□□□□ -1.65
ABCD3P28288 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
ABCD3P28288 AC018445.2-201ENST00000622987 260 ntBASIC4.72□□□□□ -1.65
ABCD3P28288 TEX41-254ENST00000626394 423 ntTSL 5 BASIC4.72□□□□□ -1.65
ABCD3P28288 AC068620.4-201ENST00000636730 1182 ntBASIC4.72□□□□□ -1.65
ABCD3P28288 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.72□□□□□ -1.65
ABCD3P28288 LINC02211-204ENST00000642024 1070 ntBASIC4.72□□□□□ -1.65
ABCD3P28288 CASC19-221ENST00000641309 1382 ntBASIC4.72□□□□□ -1.65
ABCD3P28288 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.72□□□□□ -1.65
ABCD3P28288 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
ABCD3P28288 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.72□□□□□ -1.65
ABCD3P28288 AC011978.2-201ENST00000569835 2054 ntBASIC4.72□□□□□ -1.65
ABCD3P28288 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
ABCD3P28288 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC4.72□□□□□ -1.65
ABCD3P28288 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
ABCD3P28288 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.72□□□□□ -1.65
ABCD3P28288 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
ABCD3P28288 AC112198.2-201ENST00000426589 6996 ntBASIC4.72□□□□□ -1.65
ABCD3P28288 AC025125.1-201ENST00000624743 1922 ntBASIC4.72□□□□□ -1.65
ABCD3P28288 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
ABCD3P28288 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.65
ABCD3P28288 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.71□□□□□ -1.65
ABCD3P28288 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.71□□□□□ -1.66
ABCD3P28288 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
ABCD3P28288 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
ABCD3P28288 Z95327.2-201ENST00000414579 1873 ntBASIC4.71□□□□□ -1.66
ABCD3P28288 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
ABCD3P28288 AMELX-201ENST00000348912 737 ntTSL 5 BASIC4.71□□□□□ -1.66
ABCD3P28288 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
ABCD3P28288 RNU6-1293P-201ENST00000384077 107 ntBASIC4.71□□□□□ -1.66
ABCD3P28288 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
ABCD3P28288 DSTNP4-201ENST00000399472 474 ntBASIC4.71□□□□□ -1.66
ABCD3P28288 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.71□□□□□ -1.66
ABCD3P28288 RNU4-22P-201ENST00000411058 166 ntBASIC4.71□□□□□ -1.66
ABCD3P28288 BMS1P13-201ENST00000417301 885 ntBASIC4.71□□□□□ -1.66
ABCD3P28288 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC4.71□□□□□ -1.66
ABCD3P28288 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.71□□□□□ -1.66
ABCD3P28288 MTCO1P54-201ENST00000430139 712 ntBASIC4.71□□□□□ -1.66
ABCD3P28288 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC4.71□□□□□ -1.66
ABCD3P28288 GTF2IP7-202ENST00000436677 309 ntBASIC4.71□□□□□ -1.66
ABCD3P28288 VN1R25P-201ENST00000443385 738 ntBASIC4.71□□□□□ -1.66
ABCD3P28288 EIF2S2P2-201ENST00000447161 982 ntBASIC4.71□□□□□ -1.66
ABCD3P28288 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC4.71□□□□□ -1.66
ABCD3P28288 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC4.71□□□□□ -1.66
ABCD3P28288 OTX2P1-201ENST00000450956 354 ntBASIC4.71□□□□□ -1.66
ABCD3P28288 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.71□□□□□ -1.66
ABCD3P28288 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC4.71□□□□□ -1.66
ABCD3P28288 RN7SL591P-201ENST00000496150 292 ntBASIC4.71□□□□□ -1.66
ABCD3P28288 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC4.71□□□□□ -1.66
ABCD3P28288 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC4.71□□□□□ -1.66
ABCD3P28288 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC4.71□□□□□ -1.66
ABCD3P28288 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
ABCD3P28288 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.71□□□□□ -1.66
ABCD3P28288 RN7SKP66-201ENST00000516681 231 ntBASIC4.71□□□□□ -1.66
ABCD3P28288 NPM1P6-201ENST00000521088 871 ntBASIC4.71□□□□□ -1.66
ABCD3P28288 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC4.71□□□□□ -1.66
ABCD3P28288 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC4.71□□□□□ -1.66
ABCD3P28288 APPL2-203ENST00000546731 684 ntTSL 2 BASIC4.71□□□□□ -1.66
ABCD3P28288 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms