Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
BDNFP23560 SDAD1P1-202ENST00000524156 2051 ntBASIC5.16□□□□□ -1.58
BDNFP23560 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
BDNFP23560 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
BDNFP23560 RNU2-21P-201ENST00000410368 188 ntBASIC5.16□□□□□ -1.58
BDNFP23560 RNA5SP345-201ENST00000410646 108 ntBASIC5.16□□□□□ -1.58
BDNFP23560 AC069218.2-201ENST00000411665 344 ntBASIC5.16□□□□□ -1.58
BDNFP23560 AC092832.1-201ENST00000422934 400 ntBASIC5.16□□□□□ -1.58
BDNFP23560 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
BDNFP23560 OR2B7P-201ENST00000429302 934 ntBASIC5.16□□□□□ -1.58
BDNFP23560 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC5.16□□□□□ -1.58
BDNFP23560 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC5.16□□□□□ -1.58
BDNFP23560 HSFY3P-201ENST00000444242 1191 ntBASIC5.16□□□□□ -1.58
BDNFP23560 MRPL48P1-201ENST00000445390 636 ntBASIC5.16□□□□□ -1.58
BDNFP23560 RPL32P14-201ENST00000463196 378 ntBASIC5.16□□□□□ -1.58
BDNFP23560 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
BDNFP23560 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
BDNFP23560 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
BDNFP23560 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC5.16□□□□□ -1.58
BDNFP23560 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
BDNFP23560 RN7SKP277-201ENST00000516895 283 ntBASIC5.16□□□□□ -1.58
BDNFP23560 CDH12P4-201ENST00000517835 295 ntBASIC5.16□□□□□ -1.58
BDNFP23560 CDH12P3-201ENST00000517935 295 ntBASIC5.16□□□□□ -1.58
BDNFP23560 CDH12P1-201ENST00000518435 295 ntBASIC5.16□□□□□ -1.58
BDNFP23560 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
BDNFP23560 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC5.16□□□□□ -1.58
BDNFP23560 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC5.16□□□□□ -1.58
BDNFP23560 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC5.16□□□□□ -1.58
BDNFP23560 AP001880.2-201ENST00000538233 448 ntBASIC5.16□□□□□ -1.58
BDNFP23560 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.16□□□□□ -1.58
BDNFP23560 AC006349.1-201ENST00000555526 235 ntBASIC5.16□□□□□ -1.58
BDNFP23560 AL049839.1-201ENST00000556151 657 ntBASIC5.16□□□□□ -1.58
BDNFP23560 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.16□□□□□ -1.58
BDNFP23560 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
BDNFP23560 MIR3936-201ENST00000584304 110 ntBASIC5.16□□□□□ -1.58
BDNFP23560 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC5.16□□□□□ -1.58
BDNFP23560 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
BDNFP23560 AC103792.1-201ENST00000603591 919 ntBASIC5.16□□□□□ -1.58
BDNFP23560 AC087283.1-201ENST00000604029 1074 ntBASIC5.16□□□□□ -1.58
BDNFP23560 AC010424.2-201ENST00000607594 443 ntBASIC5.16□□□□□ -1.58
BDNFP23560 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC5.16□□□□□ -1.58
BDNFP23560 AC067931.1-201ENST00000624190 671 ntBASIC5.16□□□□□ -1.58
BDNFP23560 AC020978.9-201ENST00000624380 1141 ntBASIC5.16□□□□□ -1.58
BDNFP23560 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.16□□□□□ -1.58
BDNFP23560 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
BDNFP23560 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
BDNFP23560 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
BDNFP23560 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.16□□□□□ -1.58
BDNFP23560 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
BDNFP23560 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
BDNFP23560 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
BDNFP23560 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.16□□□□□ -1.58
BDNFP23560 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
BDNFP23560 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.58
BDNFP23560 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
BDNFP23560 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC5.15□□□□□ -1.59
BDNFP23560 TMSB4XP8-201ENST00000402089 135 ntBASIC5.15□□□□□ -1.59
BDNFP23560 RNU6-77P-201ENST00000410554 91 ntBASIC5.15□□□□□ -1.59
BDNFP23560 TMSB4XP6-201ENST00000415187 135 ntBASIC5.15□□□□□ -1.59
BDNFP23560 BX664727.1-201ENST00000416024 466 ntBASIC5.15□□□□□ -1.59
BDNFP23560 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.15□□□□□ -1.59
BDNFP23560 AC241520.1-201ENST00000422654 1099 ntBASIC5.15□□□□□ -1.59
BDNFP23560 TMSB4XP1-201ENST00000424567 135 ntBASIC5.15□□□□□ -1.59
BDNFP23560 RPS6P12-201ENST00000432491 726 ntBASIC5.15□□□□□ -1.59
BDNFP23560 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.15□□□□□ -1.59
BDNFP23560 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC5.15□□□□□ -1.59
BDNFP23560 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC5.15□□□□□ -1.59
BDNFP23560 ZNF736P6Y-201ENST00000447526 1213 ntBASIC5.15□□□□□ -1.59
BDNFP23560 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC5.15□□□□□ -1.59
BDNFP23560 AL096803.2-201ENST00000450032 677 ntBASIC5.15□□□□□ -1.59
BDNFP23560 EIF2S2P5-201ENST00000457635 968 ntBASIC5.15□□□□□ -1.59
BDNFP23560 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
BDNFP23560 AP000926.1-201ENST00000479573 241 ntBASIC5.15□□□□□ -1.59
BDNFP23560 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC5.15□□□□□ -1.59
BDNFP23560 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC5.15□□□□□ -1.59
BDNFP23560 MTND2P26-201ENST00000528255 1029 ntBASIC5.15□□□□□ -1.59
BDNFP23560 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC5.15□□□□□ -1.59
BDNFP23560 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC5.15□□□□□ -1.59
BDNFP23560 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC5.15□□□□□ -1.59
BDNFP23560 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC5.15□□□□□ -1.59
BDNFP23560 AC091042.1-201ENST00000579213 173 ntBASIC5.15□□□□□ -1.59
BDNFP23560 AP002906.1-201ENST00000603405 233 ntBASIC5.15□□□□□ -1.59
BDNFP23560 AC233280.2-201ENST00000603917 1070 ntBASIC5.15□□□□□ -1.59
BDNFP23560 AL391358.1-201ENST00000605342 190 ntBASIC5.15□□□□□ -1.59
BDNFP23560 AC084824.5-201ENST00000612009 413 ntBASIC5.15□□□□□ -1.59
BDNFP23560 NAA60-237ENST00000615865 326 ntTSL 5 BASIC5.15□□□□□ -1.59
BDNFP23560 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC5.15□□□□□ -1.59
BDNFP23560 CR381572.2-201ENST00000624852 397 ntBASIC5.15□□□□□ -1.59
BDNFP23560 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC5.15□□□□□ -1.59
BDNFP23560 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.15□□□□□ -1.59
BDNFP23560 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.15□□□□□ -1.59
BDNFP23560 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC5.15□□□□□ -1.59
BDNFP23560 MTND5P3-201ENST00000438536 1800 ntBASIC5.15□□□□□ -1.59
BDNFP23560 AC008758.3-201ENST00000507003 1829 ntBASIC5.15□□□□□ -1.59
BDNFP23560 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
BDNFP23560 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
BDNFP23560 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
BDNFP23560 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
BDNFP23560 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
BDNFP23560 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms