Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
TNFSF4P23510 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
TNFSF4P23510 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
TNFSF4P23510 AC130650.2-201ENST00000618736 2403 ntBASIC4.86□□□□□ -1.63
TNFSF4P23510 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
TNFSF4P23510 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
TNFSF4P23510 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
TNFSF4P23510 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
TNFSF4P23510 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC4.86□□□□□ -1.63
TNFSF4P23510 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.86□□□□□ -1.63
TNFSF4P23510 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.86□□□□□ -1.63
TNFSF4P23510 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC4.86□□□□□ -1.63
TNFSF4P23510 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.86□□□□□ -1.63
TNFSF4P23510 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
TNFSF4P23510 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC4.86□□□□□ -1.63
TNFSF4P23510 AL078621.3-201ENST00000623707 2042 ntBASIC4.86□□□□□ -1.63
TNFSF4P23510 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
TNFSF4P23510 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
TNFSF4P23510 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
TNFSF4P23510 RNU6-1200P-201ENST00000384162 107 ntBASIC4.86□□□□□ -1.63
TNFSF4P23510 AC087752.1-201ENST00000391360 558 ntBASIC4.86□□□□□ -1.63
TNFSF4P23510 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC4.86□□□□□ -1.63
TNFSF4P23510 RPL23AP29-201ENST00000397284 453 ntBASIC4.86□□□□□ -1.63
TNFSF4P23510 ATP5F1P4-201ENST00000397288 746 ntBASIC4.86□□□□□ -1.63
TNFSF4P23510 GLULP6-201ENST00000399502 913 ntBASIC4.86□□□□□ -1.63
TNFSF4P23510 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
TNFSF4P23510 HMGB1P20-201ENST00000402555 677 ntBASIC4.86□□□□□ -1.63
TNFSF4P23510 HIST1H3PS1-201ENST00000404612 417 ntBASIC4.86□□□□□ -1.63
TNFSF4P23510 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC4.86□□□□□ -1.63
TNFSF4P23510 AL593851.1-201ENST00000426171 157 ntBASIC4.86□□□□□ -1.63
TNFSF4P23510 TMEM183AP1-205ENST00000432739 290 ntBASIC4.86□□□□□ -1.63
TNFSF4P23510 UBE2D3P1-201ENST00000436669 444 ntBASIC4.86□□□□□ -1.63
TNFSF4P23510 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC4.86□□□□□ -1.63
TNFSF4P23510 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC4.86□□□□□ -1.63
TNFSF4P23510 AC073109.1-201ENST00000445066 978 ntBASIC4.86□□□□□ -1.63
TNFSF4P23510 AL450996.1-201ENST00000445574 1202 ntBASIC4.86□□□□□ -1.63
TNFSF4P23510 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC4.86□□□□□ -1.63
TNFSF4P23510 Z83846.1-201ENST00000446798 265 ntBASIC4.86□□□□□ -1.63
TNFSF4P23510 EIF4A1P6-201ENST00000448133 1210 ntBASIC4.86□□□□□ -1.63
TNFSF4P23510 AC104073.1-201ENST00000451988 151 ntBASIC4.86□□□□□ -1.63
TNFSF4P23510 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC4.86□□□□□ -1.63
TNFSF4P23510 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC4.86□□□□□ -1.63
TNFSF4P23510 TRGVB-201ENST00000453257 471 ntBASIC4.86□□□□□ -1.63
TNFSF4P23510 FRG2FP-204ENST00000453982 852 ntBASIC4.86□□□□□ -1.63
TNFSF4P23510 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC4.86□□□□□ -1.63
TNFSF4P23510 USP9YP10-201ENST00000454868 628 ntBASIC4.86□□□□□ -1.63
TNFSF4P23510 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC4.86□□□□□ -1.63
TNFSF4P23510 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.86□□□□□ -1.63
TNFSF4P23510 AC114981.1-201ENST00000503897 678 ntBASIC4.86□□□□□ -1.63
TNFSF4P23510 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
TNFSF4P23510 RPF2P2-201ENST00000504693 896 ntBASIC4.86□□□□□ -1.63
TNFSF4P23510 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC4.86□□□□□ -1.63
TNFSF4P23510 USP9YP5-201ENST00000511770 630 ntBASIC4.86□□□□□ -1.63
TNFSF4P23510 AC026412.2-201ENST00000512270 1075 ntBASIC4.86□□□□□ -1.63
TNFSF4P23510 RN7SKP234-201ENST00000517173 224 ntBASIC4.86□□□□□ -1.63
TNFSF4P23510 AC139365.2-201ENST00000517972 253 ntBASIC4.86□□□□□ -1.63
TNFSF4P23510 MTCO1P47-201ENST00000523889 1271 ntBASIC4.86□□□□□ -1.63
TNFSF4P23510 NAP1L1P1-201ENST00000524793 1063 ntBASIC4.86□□□□□ -1.63
TNFSF4P23510 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC4.86□□□□□ -1.63
TNFSF4P23510 AC092470.1-201ENST00000546187 132 ntBASIC4.86□□□□□ -1.63
TNFSF4P23510 DCN-210ENST00000547568 823 ntTSL 3 BASIC4.86□□□□□ -1.63
TNFSF4P23510 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC4.86□□□□□ -1.63
TNFSF4P23510 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.86□□□□□ -1.63
TNFSF4P23510 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC4.86□□□□□ -1.63
TNFSF4P23510 MIR4458-201ENST00000578872 75 ntBASIC4.86□□□□□ -1.63
TNFSF4P23510 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC4.86□□□□□ -1.63
TNFSF4P23510 CDC42EP3P1-201ENST00000601004 764 ntBASIC4.86□□□□□ -1.63
TNFSF4P23510 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC4.86□□□□□ -1.63
TNFSF4P23510 AC131238.1-201ENST00000617135 328 ntBASIC4.86□□□□□ -1.63
TNFSF4P23510 AL607023.1-201ENST00000620045 248 ntBASIC4.86□□□□□ -1.63
TNFSF4P23510 AC026124.2-201ENST00000621847 656 ntBASIC4.86□□□□□ -1.63
TNFSF4P23510 AC079248.2-201ENST00000623779 326 ntBASIC4.86□□□□□ -1.63
TNFSF4P23510 UBA3-213ENST00000631029 123 ntTSL 5 BASIC4.86□□□□□ -1.63
TNFSF4P23510 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC4.86□□□□□ -1.63
TNFSF4P23510 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
TNFSF4P23510 LARS-201ENST00000274562 2213 ntTSL 2 BASIC4.86□□□□□ -1.63
TNFSF4P23510 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC4.86□□□□□ -1.63
TNFSF4P23510 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
TNFSF4P23510 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
TNFSF4P23510 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
TNFSF4P23510 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
TNFSF4P23510 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC4.86□□□□□ -1.63
TNFSF4P23510 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
TNFSF4P23510 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
TNFSF4P23510 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.63
TNFSF4P23510 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC4.85□□□□□ -1.63
TNFSF4P23510 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
TNFSF4P23510 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
TNFSF4P23510 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC4.85□□□□□ -1.63
TNFSF4P23510 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
TNFSF4P23510 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
TNFSF4P23510 TMSB4XP4-201ENST00000323496 618 ntBASIC4.85□□□□□ -1.63
TNFSF4P23510 AL159987.1-201ENST00000347911 293 ntBASIC4.85□□□□□ -1.63
TNFSF4P23510 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
TNFSF4P23510 MIR323A-201ENST00000362199 86 ntBASIC4.85□□□□□ -1.63
TNFSF4P23510 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
TNFSF4P23510 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
TNFSF4P23510 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
TNFSF4P23510 AL031985.1-201ENST00000392713 418 ntBASIC4.85□□□□□ -1.63
TNFSF4P23510 RN7SKP286-201ENST00000410894 299 ntBASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms