Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC7.02□□□□□ -1.29
RFX1P22670 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
RFX1P22670 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
RFX1P22670 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
RFX1P22670 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
RFX1P22670 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
RFX1P22670 CASC19-246ENST00000641625 1606 ntBASIC7.01□□□□□ -1.29
RFX1P22670 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC7.01□□□□□ -1.29
RFX1P22670 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC7.01□□□□□ -1.29
RFX1P22670 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
RFX1P22670 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
RFX1P22670 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
RFX1P22670 SALL4P7-201ENST00000555779 3120 ntBASIC7.01□□□□□ -1.29
RFX1P22670 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
RFX1P22670 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
RFX1P22670 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
RFX1P22670 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
RFX1P22670 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC7.01□□□□□ -1.29
RFX1P22670 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC7.01□□□□□ -1.29
RFX1P22670 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC7.01□□□□□ -1.29
RFX1P22670 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
RFX1P22670 RNU6-1085P-201ENST00000363576 107 ntBASIC7.01□□□□□ -1.29
RFX1P22670 MIR92A2-201ENST00000385299 75 ntBASIC7.01□□□□□ -1.29
RFX1P22670 SMARCE1P6-201ENST00000398372 1216 ntBASIC7.01□□□□□ -1.29
RFX1P22670 EIF5P1-201ENST00000400019 1231 ntBASIC7.01□□□□□ -1.29
RFX1P22670 AL023807.1-201ENST00000407932 359 ntBASIC7.01□□□□□ -1.29
RFX1P22670 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC7.01□□□□□ -1.29
RFX1P22670 MTND3P17-201ENST00000416968 344 ntBASIC7.01□□□□□ -1.29
RFX1P22670 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC7.01□□□□□ -1.29
RFX1P22670 TEX41-204ENST00000423031 491 ntTSL 4 BASIC7.01□□□□□ -1.29
RFX1P22670 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
RFX1P22670 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC7.01□□□□□ -1.29
RFX1P22670 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC7.01□□□□□ -1.29
RFX1P22670 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC7.01□□□□□ -1.29
RFX1P22670 AP000542.1-201ENST00000448473 371 ntBASIC7.01□□□□□ -1.29
RFX1P22670 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC7.01□□□□□ -1.29
RFX1P22670 TRBV26-201ENST00000456572 344 ntBASIC7.01□□□□□ -1.29
RFX1P22670 RN7SL552P-201ENST00000462094 276 ntBASIC7.01□□□□□ -1.29
RFX1P22670 AC007182.2-201ENST00000489251 402 ntBASIC7.01□□□□□ -1.29
RFX1P22670 EIF3LP3-201ENST00000495197 822 ntBASIC7.01□□□□□ -1.29
RFX1P22670 OR5H5P-201ENST00000503164 928 ntBASIC7.01□□□□□ -1.29
RFX1P22670 AC018797.3-201ENST00000513388 1241 ntBASIC7.01□□□□□ -1.29
RFX1P22670 HSD3BP3-201ENST00000514706 994 ntBASIC7.01□□□□□ -1.29
RFX1P22670 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC7.01□□□□□ -1.29
RFX1P22670 SCARNA21.2-201ENST00000516600 166 ntBASIC7.01□□□□□ -1.29
RFX1P22670 Y_RNA.704-201ENST00000516851 102 ntBASIC7.01□□□□□ -1.29
RFX1P22670 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
RFX1P22670 IGKV1D-22-201ENST00000518953 324 ntBASIC7.01□□□□□ -1.29
RFX1P22670 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC7.01□□□□□ -1.29
RFX1P22670 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC7.01□□□□□ -1.29
RFX1P22670 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
RFX1P22670 MTND1P35-201ENST00000526739 508 ntBASIC7.01□□□□□ -1.29
RFX1P22670 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC7.01□□□□□ -1.29
RFX1P22670 AP004609.2-201ENST00000532177 190 ntBASIC7.01□□□□□ -1.29
RFX1P22670 GLYCAM1-201ENST00000546596 285 ntBASIC7.01□□□□□ -1.29
RFX1P22670 NPM1P42-201ENST00000560329 862 ntBASIC7.01□□□□□ -1.29
RFX1P22670 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC7.01□□□□□ -1.29
RFX1P22670 AL845331.3-202ENST00000562856 261 ntBASIC7.01□□□□□ -1.29
RFX1P22670 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC7.01□□□□□ -1.29
RFX1P22670 UBE2V2P2-201ENST00000587677 504 ntBASIC7.01□□□□□ -1.29
RFX1P22670 AC060780.3-201ENST00000589464 80 ntBASIC7.01□□□□□ -1.29
RFX1P22670 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC7.01□□□□□ -1.29
RFX1P22670 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC7.01□□□□□ -1.29
RFX1P22670 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC7.01□□□□□ -1.29
RFX1P22670 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC7.01□□□□□ -1.29
RFX1P22670 COX6CP4-201ENST00000605798 228 ntBASIC7.01□□□□□ -1.29
RFX1P22670 AC011816.2-201ENST00000607089 556 ntBASIC7.01□□□□□ -1.29
RFX1P22670 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
RFX1P22670 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC7.01□□□□□ -1.29
RFX1P22670 MRPL57P1-201ENST00000621486 265 ntBASIC7.01□□□□□ -1.29
RFX1P22670 AC129778.1-202ENST00000623812 261 ntBASIC7.01□□□□□ -1.29
RFX1P22670 AC073488.9-201ENST00000631601 754 ntBASIC7.01□□□□□ -1.29
RFX1P22670 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC7.01□□□□□ -1.29
RFX1P22670 AL591379.1-207ENST00000635982 261 ntBASIC7.01□□□□□ -1.29
RFX1P22670 AMYH02020865.1-205ENST00000636189 261 ntBASIC7.01□□□□□ -1.29
RFX1P22670 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
RFX1P22670 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
RFX1P22670 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
RFX1P22670 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC7.01□□□□□ -1.29
RFX1P22670 RAB6C-AS1-201ENST00000412425 2454 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
RFX1P22670 AL022323.4-201ENST00000623980 13120 ntBASIC7.01□□□□□ -1.29
RFX1P22670 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC7.01□□□□□ -1.29
RFX1P22670 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC7.01□□□□□ -1.29
RFX1P22670 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC7□□□□□ -1.29
RFX1P22670 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC7□□□□□ -1.29
RFX1P22670 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC7□□□□□ -1.29
RFX1P22670 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
RFX1P22670 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
RFX1P22670 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC7□□□□□ -1.29
RFX1P22670 AC016583.1-201ENST00000624221 2431 ntBASIC7□□□□□ -1.29
RFX1P22670 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
RFX1P22670 HSPD1P8-201ENST00000400121 1658 ntBASIC7□□□□□ -1.29
RFX1P22670 AC025574.1-201ENST00000554784 1653 ntBASIC7□□□□□ -1.29
RFX1P22670 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC7□□□□□ -1.29
RFX1P22670 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC7□□□□□ -1.29
RFX1P22670 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
RFX1P22670 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
RFX1P22670 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC7□□□□□ -1.29
RFX1P22670 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC7□□□□□ -1.29
RFX1P22670 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms