Protein–RNA interactions for Protein: P20585

MSH3, DNA mismatch repair protein Msh3, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3P20585 GSTP1P1-201ENST00000548078 319 ntBASIC4.58□□□□□ -1.68
MSH3P20585 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC4.58□□□□□ -1.68
MSH3P20585 AC063949.1-201ENST00000552900 865 ntBASIC4.58□□□□□ -1.68
MSH3P20585 ATP5J2P6-201ENST00000565203 266 ntBASIC4.58□□□□□ -1.68
MSH3P20585 AC073091.2-201ENST00000603205 907 ntBASIC4.58□□□□□ -1.68
MSH3P20585 AL133338.2-201ENST00000604292 736 ntBASIC4.58□□□□□ -1.68
MSH3P20585 VN1R9P-201ENST00000614184 867 ntBASIC4.58□□□□□ -1.68
MSH3P20585 MIR6780A-201ENST00000615089 68 ntBASIC4.58□□□□□ -1.68
MSH3P20585 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.58□□□□□ -1.68
MSH3P20585 AC131238.1-201ENST00000617135 328 ntBASIC4.58□□□□□ -1.68
MSH3P20585 AL512427.1-201ENST00000618593 349 ntBASIC4.58□□□□□ -1.68
MSH3P20585 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.58□□□□□ -1.68
MSH3P20585 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
MSH3P20585 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
MSH3P20585 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.58□□□□□ -1.68
MSH3P20585 AL592182.3-201ENST00000642132 3304 ntBASIC4.58□□□□□ -1.68
MSH3P20585 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
MSH3P20585 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
MSH3P20585 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
MSH3P20585 AL355852.1-201ENST00000454081 1771 ntBASIC4.58□□□□□ -1.68
MSH3P20585 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
MSH3P20585 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.58□□□□□ -1.68
MSH3P20585 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
MSH3P20585 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
MSH3P20585 AL391684.1-202ENST00000641293 1636 ntBASIC4.57□□□□□ -1.68
MSH3P20585 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
MSH3P20585 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.57□□□□□ -1.68
MSH3P20585 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
MSH3P20585 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
MSH3P20585 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
MSH3P20585 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
MSH3P20585 IL6STP1-201ENST00000346911 1020 ntBASIC4.57□□□□□ -1.68
MSH3P20585 RNU6-207P-201ENST00000384137 107 ntBASIC4.57□□□□□ -1.68
MSH3P20585 SNORD96B-201ENST00000386148 79 ntBASIC4.57□□□□□ -1.68
MSH3P20585 RPS16P5-201ENST00000406501 404 ntBASIC4.57□□□□□ -1.68
MSH3P20585 RPL37P18-201ENST00000411602 243 ntBASIC4.57□□□□□ -1.68
MSH3P20585 AC096533.1-201ENST00000411645 353 ntBASIC4.57□□□□□ -1.68
MSH3P20585 MTCO2P8-201ENST00000412213 658 ntBASIC4.57□□□□□ -1.68
MSH3P20585 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC4.57□□□□□ -1.68
MSH3P20585 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC4.57□□□□□ -1.68
MSH3P20585 AC241520.1-201ENST00000422654 1099 ntBASIC4.57□□□□□ -1.68
MSH3P20585 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC4.57□□□□□ -1.68
MSH3P20585 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.57□□□□□ -1.68
MSH3P20585 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC4.57□□□□□ -1.68
MSH3P20585 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.57□□□□□ -1.68
MSH3P20585 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.57□□□□□ -1.68
MSH3P20585 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
MSH3P20585 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.57□□□□□ -1.68
MSH3P20585 snoU109.3-201ENST00000459477 145 ntBASIC4.57□□□□□ -1.68
MSH3P20585 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.57□□□□□ -1.68
MSH3P20585 RN7SL354P-201ENST00000469282 294 ntBASIC4.57□□□□□ -1.68
MSH3P20585 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC4.57□□□□□ -1.68
MSH3P20585 RPL23AP37-201ENST00000479658 549 ntBASIC4.57□□□□□ -1.68
MSH3P20585 AC107398.1-201ENST00000486904 505 ntBASIC4.57□□□□□ -1.68
MSH3P20585 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC4.57□□□□□ -1.68
MSH3P20585 RPS4XP18-201ENST00000495480 763 ntBASIC4.57□□□□□ -1.68
MSH3P20585 MTND4LP2-201ENST00000502312 285 ntBASIC4.57□□□□□ -1.68
MSH3P20585 AC025459.1-201ENST00000504072 156 ntBASIC4.57□□□□□ -1.68
MSH3P20585 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC4.57□□□□□ -1.68
MSH3P20585 AC007016.1-201ENST00000512110 244 ntBASIC4.57□□□□□ -1.68
MSH3P20585 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC4.57□□□□□ -1.68
MSH3P20585 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC4.57□□□□□ -1.68
MSH3P20585 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.57□□□□□ -1.68
MSH3P20585 AC022882.1-201ENST00000532142 501 ntBASIC4.57□□□□□ -1.68
MSH3P20585 AP006289.1-201ENST00000538089 277 ntBASIC4.57□□□□□ -1.68
MSH3P20585 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
MSH3P20585 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.57□□□□□ -1.68
MSH3P20585 AC105129.1-201ENST00000560250 297 ntBASIC4.57□□□□□ -1.68
MSH3P20585 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.57□□□□□ -1.68
MSH3P20585 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.57□□□□□ -1.68
MSH3P20585 AC069431.2-201ENST00000604149 1099 ntBASIC4.57□□□□□ -1.68
MSH3P20585 AC245100.7-201ENST00000609678 442 ntBASIC4.57□□□□□ -1.68
MSH3P20585 RNU6-1192P-201ENST00000612197 107 ntBASIC4.57□□□□□ -1.68
MSH3P20585 RNU6-489P-201ENST00000618289 107 ntBASIC4.57□□□□□ -1.68
MSH3P20585 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
MSH3P20585 AC027290.2-201ENST00000623210 18662 ntBASIC4.57□□□□□ -1.68
MSH3P20585 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
MSH3P20585 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.57□□□□□ -1.68
MSH3P20585 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.57□□□□□ -1.68
MSH3P20585 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
MSH3P20585 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
MSH3P20585 OR14L1P-202ENST00000641545 3009 ntBASIC4.56□□□□□ -1.68
MSH3P20585 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
MSH3P20585 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
MSH3P20585 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.56□□□□□ -1.68
MSH3P20585 EOGT-210ENST00000615922 1931 ntBASIC4.56□□□□□ -1.68
MSH3P20585 AC135352.1-201ENST00000506173 1418 ntBASIC4.56□□□□□ -1.68
MSH3P20585 AL627171.1-201ENST00000618845 1308 ntBASIC4.56□□□□□ -1.68
MSH3P20585 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
MSH3P20585 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
MSH3P20585 SNORD56.4-201ENST00000363883 71 ntBASIC4.56□□□□□ -1.68
MSH3P20585 AP002784.2-201ENST00000397300 549 ntBASIC4.56□□□□□ -1.68
MSH3P20585 AL049697.2-201ENST00000403708 294 ntBASIC4.56□□□□□ -1.68
MSH3P20585 ATF1P1-201ENST00000406040 927 ntBASIC4.56□□□□□ -1.68
MSH3P20585 AL034374.1-201ENST00000406329 351 ntBASIC4.56□□□□□ -1.68
MSH3P20585 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC4.56□□□□□ -1.68
MSH3P20585 AC009237.10-201ENST00000414112 510 ntBASIC4.56□□□□□ -1.68
MSH3P20585 UBE2V1P9-201ENST00000414760 368 ntBASIC4.56□□□□□ -1.68
MSH3P20585 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.56□□□□□ -1.68
MSH3P20585 AL590139.1-201ENST00000416267 400 ntBASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms