Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 ADAD1P2-201ENST00000588476 646 ntBASIC4.61□□□□□ -1.67
HLA-DPA1P20036 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.61□□□□□ -1.67
HLA-DPA1P20036 AL354696.1-201ENST00000614652 497 ntBASIC4.61□□□□□ -1.67
HLA-DPA1P20036 AC245389.2-201ENST00000616023 576 ntBASIC4.61□□□□□ -1.67
HLA-DPA1P20036 AC243756.2-201ENST00000618406 463 ntBASIC4.61□□□□□ -1.67
HLA-DPA1P20036 AC242843.1-201ENST00000618702 573 ntBASIC4.61□□□□□ -1.67
HLA-DPA1P20036 AC140113.4-201ENST00000622087 222 ntBASIC4.61□□□□□ -1.67
HLA-DPA1P20036 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HLA-DPA1P20036 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
HLA-DPA1P20036 MTND4P21-201ENST00000453886 1357 ntBASIC4.61□□□□□ -1.67
HLA-DPA1P20036 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.61□□□□□ -1.67
HLA-DPA1P20036 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.61□□□□□ -1.67
HLA-DPA1P20036 AP001002.1-201ENST00000625148 1513 ntBASIC4.61□□□□□ -1.67
HLA-DPA1P20036 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HLA-DPA1P20036 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
HLA-DPA1P20036 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HLA-DPA1P20036 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HLA-DPA1P20036 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
HLA-DPA1P20036 AC021146.4-201ENST00000309229 279 ntBASIC4.6□□□□□ -1.67
HLA-DPA1P20036 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
HLA-DPA1P20036 MIR192-201ENST00000384915 110 ntBASIC4.6□□□□□ -1.67
HLA-DPA1P20036 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.6□□□□□ -1.67
HLA-DPA1P20036 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC4.6□□□□□ -1.67
HLA-DPA1P20036 RN7SKP106-201ENST00000410832 272 ntBASIC4.6□□□□□ -1.67
HLA-DPA1P20036 RNU2-6P-201ENST00000411404 190 ntBASIC4.6□□□□□ -1.67
HLA-DPA1P20036 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.6□□□□□ -1.67
HLA-DPA1P20036 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.6□□□□□ -1.67
HLA-DPA1P20036 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC4.6□□□□□ -1.67
HLA-DPA1P20036 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.6□□□□□ -1.67
HLA-DPA1P20036 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC4.6□□□□□ -1.67
HLA-DPA1P20036 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.6□□□□□ -1.67
HLA-DPA1P20036 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.6□□□□□ -1.67
HLA-DPA1P20036 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.6□□□□□ -1.67
HLA-DPA1P20036 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.6□□□□□ -1.67
HLA-DPA1P20036 AC096992.1-201ENST00000459808 709 ntBASIC4.6□□□□□ -1.67
HLA-DPA1P20036 RPL12P20-201ENST00000475538 479 ntBASIC4.6□□□□□ -1.67
HLA-DPA1P20036 TRBV8-2-201ENST00000475637 270 ntBASIC4.6□□□□□ -1.67
HLA-DPA1P20036 AC108729.2-201ENST00000476543 840 ntBASIC4.6□□□□□ -1.67
HLA-DPA1P20036 AC008897.1-201ENST00000494006 347 ntBASIC4.6□□□□□ -1.67
HLA-DPA1P20036 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HLA-DPA1P20036 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC4.6□□□□□ -1.67
HLA-DPA1P20036 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC4.6□□□□□ -1.67
HLA-DPA1P20036 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.6□□□□□ -1.67
HLA-DPA1P20036 RNA5SP446-201ENST00000515955 82 ntBASIC4.6□□□□□ -1.67
HLA-DPA1P20036 MAL2-205ENST00000521048 575 ntTSL 4 BASIC4.6□□□□□ -1.67
HLA-DPA1P20036 CYCSP28-201ENST00000534284 321 ntBASIC4.6□□□□□ -1.67
HLA-DPA1P20036 AP006289.1-201ENST00000538089 277 ntBASIC4.6□□□□□ -1.67
HLA-DPA1P20036 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.6□□□□□ -1.67
HLA-DPA1P20036 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.6□□□□□ -1.67
HLA-DPA1P20036 MIR4330-201ENST00000579077 105 ntBASIC4.6□□□□□ -1.67
HLA-DPA1P20036 AP005119.2-201ENST00000579735 1105 ntBASIC4.6□□□□□ -1.67
HLA-DPA1P20036 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.6□□□□□ -1.67
HLA-DPA1P20036 RPL7P50-201ENST00000600588 727 ntBASIC4.6□□□□□ -1.67
HLA-DPA1P20036 AC068790.7-201ENST00000602347 528 ntBASIC4.6□□□□□ -1.67
HLA-DPA1P20036 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.6□□□□□ -1.67
HLA-DPA1P20036 MIR6780A-201ENST00000615089 68 ntBASIC4.6□□□□□ -1.67
HLA-DPA1P20036 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.6□□□□□ -1.67
HLA-DPA1P20036 AL035461.2-201ENST00000619201 524 ntBASIC4.6□□□□□ -1.67
HLA-DPA1P20036 AC016717.3-201ENST00000624730 554 ntBASIC4.6□□□□□ -1.67
HLA-DPA1P20036 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC4.6□□□□□ -1.67
HLA-DPA1P20036 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC4.6□□□□□ -1.67
HLA-DPA1P20036 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
HLA-DPA1P20036 FRG1DP-201ENST00000635586 771 ntBASIC4.6□□□□□ -1.67
HLA-DPA1P20036 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HLA-DPA1P20036 OR51H2P-202ENST00000641424 3046 ntBASIC4.6□□□□□ -1.67
HLA-DPA1P20036 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
HLA-DPA1P20036 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.6□□□□□ -1.67
HLA-DPA1P20036 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
HLA-DPA1P20036 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.59□□□□□ -1.67
HLA-DPA1P20036 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
HLA-DPA1P20036 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
HLA-DPA1P20036 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.59□□□□□ -1.67
HLA-DPA1P20036 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
HLA-DPA1P20036 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
HLA-DPA1P20036 OR10J6P-201ENST00000289731 930 ntBASIC4.59□□□□□ -1.67
HLA-DPA1P20036 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
HLA-DPA1P20036 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC4.59□□□□□ -1.67
HLA-DPA1P20036 RNA5SP391-201ENST00000363456 119 ntBASIC4.59□□□□□ -1.67
HLA-DPA1P20036 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
HLA-DPA1P20036 SNORD96B-201ENST00000386148 79 ntBASIC4.59□□□□□ -1.67
HLA-DPA1P20036 AL049697.2-201ENST00000403708 294 ntBASIC4.59□□□□□ -1.67
HLA-DPA1P20036 UBE2V1P15-201ENST00000407776 448 ntBASIC4.59□□□□□ -1.67
HLA-DPA1P20036 CEACAMP8-201ENST00000413902 580 ntBASIC4.59□□□□□ -1.67
HLA-DPA1P20036 RAD23BP1-201ENST00000421404 1227 ntBASIC4.59□□□□□ -1.67
HLA-DPA1P20036 AC012519.1-201ENST00000424588 610 ntBASIC4.59□□□□□ -1.67
HLA-DPA1P20036 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC4.59□□□□□ -1.67
HLA-DPA1P20036 MORF4L1P7-201ENST00000426038 703 ntBASIC4.59□□□□□ -1.67
HLA-DPA1P20036 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.59□□□□□ -1.67
HLA-DPA1P20036 AC023347.2-201ENST00000433994 462 ntBASIC4.59□□□□□ -1.67
HLA-DPA1P20036 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.59□□□□□ -1.67
HLA-DPA1P20036 RPS27P5-201ENST00000444247 244 ntBASIC4.59□□□□□ -1.67
HLA-DPA1P20036 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC4.59□□□□□ -1.67
HLA-DPA1P20036 YWHAQP9-201ENST00000445891 512 ntBASIC4.59□□□□□ -1.67
HLA-DPA1P20036 AL162591.2-201ENST00000449634 317 ntBASIC4.59□□□□□ -1.67
HLA-DPA1P20036 AL513533.1-201ENST00000453728 415 ntBASIC4.59□□□□□ -1.67
HLA-DPA1P20036 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.59□□□□□ -1.67
HLA-DPA1P20036 AL035404.1-201ENST00000497982 568 ntBASIC4.59□□□□□ -1.67
HLA-DPA1P20036 AC110792.2-201ENST00000510278 224 ntBASIC4.59□□□□□ -1.67
HLA-DPA1P20036 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
HLA-DPA1P20036 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms