Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 Y_RNA.326-201ENST00000365176 113 ntBASIC6.62□□□□□ -1.35
HOXD8P13378 SUGT1P1-201ENST00000379514 476 ntBASIC6.62□□□□□ -1.35
HOXD8P13378 ZSCAN12P1-201ENST00000406489 419 ntBASIC6.62□□□□□ -1.35
HOXD8P13378 AL139128.1-201ENST00000413921 941 ntBASIC6.62□□□□□ -1.35
HOXD8P13378 SPA17P1-201ENST00000416656 452 ntBASIC6.62□□□□□ -1.35
HOXD8P13378 BOLA3P4-201ENST00000418151 400 ntBASIC6.62□□□□□ -1.35
HOXD8P13378 BX510359.3-201ENST00000422168 306 ntBASIC6.62□□□□□ -1.35
HOXD8P13378 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
HOXD8P13378 MTCO2P12-201ENST00000427426 682 ntBASIC6.62□□□□□ -1.35
HOXD8P13378 ISCA1P6-201ENST00000427740 390 ntBASIC6.62□□□□□ -1.35
HOXD8P13378 AC002504.1-201ENST00000438281 691 ntBASIC6.62□□□□□ -1.35
HOXD8P13378 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC6.62□□□□□ -1.35
HOXD8P13378 RPL7P59-201ENST00000447700 943 ntBASIC6.62□□□□□ -1.35
HOXD8P13378 RPL26P28-201ENST00000451325 435 ntBASIC6.62□□□□□ -1.35
HOXD8P13378 RPL38P1-201ENST00000460914 211 ntBASIC6.62□□□□□ -1.35
HOXD8P13378 RPS23P6-201ENST00000466136 431 ntBASIC6.62□□□□□ -1.35
HOXD8P13378 AC017015.1-201ENST00000477387 286 ntBASIC6.62□□□□□ -1.35
HOXD8P13378 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
HOXD8P13378 RN7SL284P-201ENST00000498823 275 ntBASIC6.62□□□□□ -1.35
HOXD8P13378 KCTD9P5-201ENST00000504141 1170 ntBASIC6.62□□□□□ -1.35
HOXD8P13378 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC6.62□□□□□ -1.35
HOXD8P13378 KCTD9P2-201ENST00000512203 1013 ntBASIC6.62□□□□□ -1.35
HOXD8P13378 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC6.62□□□□□ -1.35
HOXD8P13378 snoU109.5-201ENST00000516231 132 ntBASIC6.62□□□□□ -1.35
HOXD8P13378 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC6.62□□□□□ -1.35
HOXD8P13378 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC6.62□□□□□ -1.35
HOXD8P13378 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC6.62□□□□□ -1.35
HOXD8P13378 AC112191.2-201ENST00000522428 333 ntBASIC6.62□□□□□ -1.35
HOXD8P13378 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC6.62□□□□□ -1.35
HOXD8P13378 HSPA8P13-201ENST00000523715 472 ntBASIC6.62□□□□□ -1.35
HOXD8P13378 AC027667.1-201ENST00000545814 304 ntBASIC6.62□□□□□ -1.35
HOXD8P13378 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC6.62□□□□□ -1.35
HOXD8P13378 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC6.62□□□□□ -1.35
HOXD8P13378 AC022404.1-201ENST00000555320 273 ntBASIC6.62□□□□□ -1.35
HOXD8P13378 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC6.62□□□□□ -1.35
HOXD8P13378 AC007494.1-201ENST00000562293 760 ntBASIC6.62□□□□□ -1.35
HOXD8P13378 AC011840.5-201ENST00000582125 771 ntBASIC6.62□□□□□ -1.35
HOXD8P13378 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC6.62□□□□□ -1.35
HOXD8P13378 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC6.62□□□□□ -1.35
HOXD8P13378 COX6CP4-201ENST00000605798 228 ntBASIC6.62□□□□□ -1.35
HOXD8P13378 AL451049.1-201ENST00000608672 497 ntBASIC6.62□□□□□ -1.35
HOXD8P13378 RN7SL544P-201ENST00000617232 284 ntBASIC6.62□□□□□ -1.35
HOXD8P13378 RN7SL763P-201ENST00000620922 284 ntBASIC6.62□□□□□ -1.35
HOXD8P13378 AC139792.3-201ENST00000623525 224 ntBASIC6.62□□□□□ -1.35
HOXD8P13378 AC005618.4-201ENST00000625053 554 ntBASIC6.62□□□□□ -1.35
HOXD8P13378 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC6.62□□□□□ -1.35
HOXD8P13378 AC063952.1-203ENST00000634410 658 ntBASIC6.62□□□□□ -1.35
HOXD8P13378 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC6.62□□□□□ -1.35
HOXD8P13378 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC6.62□□□□□ -1.35
HOXD8P13378 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC6.62□□□□□ -1.35
HOXD8P13378 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC6.62□□□□□ -1.35
HOXD8P13378 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
HOXD8P13378 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
HOXD8P13378 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
HOXD8P13378 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC6.62□□□□□ -1.35
HOXD8P13378 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC6.62□□□□□ -1.35
HOXD8P13378 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
HOXD8P13378 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC6.62□□□□□ -1.35
HOXD8P13378 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
HOXD8P13378 AL161901.1-201ENST00000624954 3425 ntBASIC6.62□□□□□ -1.35
HOXD8P13378 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC6.61□□□□□ -1.35
HOXD8P13378 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
HOXD8P13378 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC6.61□□□□□ -1.35
HOXD8P13378 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
HOXD8P13378 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
HOXD8P13378 SHQ1P1-201ENST00000437111 1544 ntBASIC6.61□□□□□ -1.35
HOXD8P13378 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
HOXD8P13378 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
HOXD8P13378 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
HOXD8P13378 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
HOXD8P13378 RNA5SP46-201ENST00000362370 120 ntBASIC6.61□□□□□ -1.35
HOXD8P13378 RNA5SP394-201ENST00000364216 119 ntBASIC6.61□□□□□ -1.35
HOXD8P13378 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
HOXD8P13378 RNU6-878P-201ENST00000384578 110 ntBASIC6.61□□□□□ -1.35
HOXD8P13378 HMGB1P20-201ENST00000402555 677 ntBASIC6.61□□□□□ -1.35
HOXD8P13378 RNU6-195P-201ENST00000411352 109 ntBASIC6.61□□□□□ -1.35
HOXD8P13378 MRPL53P1-201ENST00000414323 319 ntBASIC6.61□□□□□ -1.35
HOXD8P13378 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC6.61□□□□□ -1.35
HOXD8P13378 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC6.61□□□□□ -1.35
HOXD8P13378 AC099677.3-201ENST00000427081 395 ntBASIC6.61□□□□□ -1.35
HOXD8P13378 NPM1P22-201ENST00000427761 952 ntBASIC6.61□□□□□ -1.35
HOXD8P13378 BX890604.2-201ENST00000427883 474 ntBASIC6.61□□□□□ -1.35
HOXD8P13378 RPS12P17-201ENST00000438591 377 ntBASIC6.61□□□□□ -1.35
HOXD8P13378 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC6.61□□□□□ -1.35
HOXD8P13378 CALM1P1-201ENST00000442082 433 ntBASIC6.61□□□□□ -1.35
HOXD8P13378 MTND6P13-201ENST00000443510 523 ntBASIC6.61□□□□□ -1.35
HOXD8P13378 YWHAQP9-201ENST00000445891 512 ntBASIC6.61□□□□□ -1.35
HOXD8P13378 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC6.61□□□□□ -1.35
HOXD8P13378 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC6.61□□□□□ -1.35
HOXD8P13378 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC6.61□□□□□ -1.35
HOXD8P13378 AC093166.4-201ENST00000457867 318 ntBASIC6.61□□□□□ -1.35
HOXD8P13378 AC023598.1-201ENST00000472521 361 ntBASIC6.61□□□□□ -1.35
HOXD8P13378 RPL7P42-201ENST00000481005 679 ntBASIC6.61□□□□□ -1.35
HOXD8P13378 RPS29P25-201ENST00000481709 171 ntBASIC6.61□□□□□ -1.35
HOXD8P13378 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC6.61□□□□□ -1.35
HOXD8P13378 RPL35P6-201ENST00000490024 372 ntBASIC6.61□□□□□ -1.35
HOXD8P13378 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC6.61□□□□□ -1.35
HOXD8P13378 ATP5LP3-201ENST00000514223 304 ntBASIC6.61□□□□□ -1.35
HOXD8P13378 RNA5SP362-201ENST00000516048 118 ntBASIC6.61□□□□□ -1.35
HOXD8P13378 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC6.61□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms