Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 OR5AZ1P-201ENST00000527448 943 ntBASIC3.16□□□□□ -1.9
CXCL1P09341 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
CXCL1P09341 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC3.16□□□□□ -1.9
CXCL1P09341 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC3.16□□□□□ -1.9
CXCL1P09341 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC3.16□□□□□ -1.9
CXCL1P09341 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.16□□□□□ -1.9
CXCL1P09341 AC012146.2-201ENST00000576545 416 ntBASIC3.16□□□□□ -1.9
CXCL1P09341 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.16□□□□□ -1.9
CXCL1P09341 AC091042.1-201ENST00000579213 173 ntBASIC3.16□□□□□ -1.9
CXCL1P09341 MIR4737-201ENST00000583979 81 ntBASIC3.16□□□□□ -1.9
CXCL1P09341 AP001160.4-201ENST00000596971 382 ntBASIC3.16□□□□□ -1.9
CXCL1P09341 VN1R81P-201ENST00000602085 372 ntBASIC3.16□□□□□ -1.9
CXCL1P09341 AC005084.1-201ENST00000605160 304 ntBASIC3.16□□□□□ -1.9
CXCL1P09341 AL133243.1-201ENST00000614487 366 ntBASIC3.16□□□□□ -1.9
CXCL1P09341 AC000123.2-201ENST00000623124 461 ntBASIC3.16□□□□□ -1.9
CXCL1P09341 AC020978.9-201ENST00000624380 1141 ntBASIC3.16□□□□□ -1.9
CXCL1P09341 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC3.16□□□□□ -1.9
CXCL1P09341 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CXCL1P09341 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
CXCL1P09341 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CXCL1P09341 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CXCL1P09341 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
CXCL1P09341 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
CXCL1P09341 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.15□□□□□ -1.9
CXCL1P09341 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
CXCL1P09341 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.15□□□□□ -1.9
CXCL1P09341 RNA5SP191-201ENST00000362585 102 ntBASIC3.15□□□□□ -1.91
CXCL1P09341 RNA5SP175-201ENST00000364275 119 ntBASIC3.15□□□□□ -1.91
CXCL1P09341 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.15□□□□□ -1.91
CXCL1P09341 HSPE1P8-201ENST00000406997 288 ntBASIC3.15□□□□□ -1.91
CXCL1P09341 RN7SKP285-201ENST00000410137 318 ntBASIC3.15□□□□□ -1.91
CXCL1P09341 RNA5SP239-201ENST00000410218 129 ntBASIC3.15□□□□□ -1.91
CXCL1P09341 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CXCL1P09341 PGBD4P8-201ENST00000412993 562 ntBASIC3.15□□□□□ -1.91
CXCL1P09341 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC3.15□□□□□ -1.91
CXCL1P09341 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC3.15□□□□□ -1.91
CXCL1P09341 HMGB3P5-201ENST00000428894 612 ntBASIC3.15□□□□□ -1.91
CXCL1P09341 AC083863.1-201ENST00000438811 231 ntBASIC3.15□□□□□ -1.91
CXCL1P09341 RPL7P31-201ENST00000450192 724 ntBASIC3.15□□□□□ -1.91
CXCL1P09341 AL645939.1-201ENST00000453429 797 ntBASIC3.15□□□□□ -1.91
CXCL1P09341 PPIAP21-201ENST00000464473 501 ntBASIC3.15□□□□□ -1.91
CXCL1P09341 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC3.15□□□□□ -1.91
CXCL1P09341 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC3.15□□□□□ -1.91
CXCL1P09341 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CXCL1P09341 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CXCL1P09341 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CXCL1P09341 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC3.15□□□□□ -1.91
CXCL1P09341 IGHVIII-38-1-201ENST00000521454 282 ntBASIC3.15□□□□□ -1.91
CXCL1P09341 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
CXCL1P09341 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.15□□□□□ -1.91
CXCL1P09341 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
CXCL1P09341 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.15□□□□□ -1.91
CXCL1P09341 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.15□□□□□ -1.91
CXCL1P09341 HMGN2P6-201ENST00000551091 273 ntBASIC3.15□□□□□ -1.91
CXCL1P09341 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CXCL1P09341 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.15□□□□□ -1.91
CXCL1P09341 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC3.15□□□□□ -1.91
CXCL1P09341 AC022146.1-201ENST00000595307 847 ntBASIC3.15□□□□□ -1.91
CXCL1P09341 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.15□□□□□ -1.91
CXCL1P09341 AL365503.1-201ENST00000605247 905 ntBASIC3.15□□□□□ -1.91
CXCL1P09341 AC025175.1-201ENST00000606482 759 ntBASIC3.15□□□□□ -1.91
CXCL1P09341 MIR4302-201ENST00000638058 60 ntBASIC3.15□□□□□ -1.91
CXCL1P09341 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
CXCL1P09341 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.15□□□□□ -1.91
CXCL1P09341 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
CXCL1P09341 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.15□□□□□ -1.91
CXCL1P09341 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
CXCL1P09341 AC110792.3-201ENST00000595906 1614 ntBASIC3.15□□□□□ -1.91
CXCL1P09341 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
CXCL1P09341 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.14□□□□□ -1.91
CXCL1P09341 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CXCL1P09341 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.14□□□□□ -1.91
CXCL1P09341 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CXCL1P09341 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
CXCL1P09341 RNA5SP507-201ENST00000363603 121 ntBASIC3.14□□□□□ -1.91
CXCL1P09341 MIR298-201ENST00000401212 88 ntBASIC3.14□□□□□ -1.91
CXCL1P09341 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC3.14□□□□□ -1.91
CXCL1P09341 KCTD9P3-201ENST00000434597 1169 ntBASIC3.14□□□□□ -1.91
CXCL1P09341 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC3.14□□□□□ -1.91
CXCL1P09341 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC3.14□□□□□ -1.91
CXCL1P09341 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CXCL1P09341 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC3.14□□□□□ -1.91
CXCL1P09341 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC3.14□□□□□ -1.91
CXCL1P09341 snoU13.20-201ENST00000459180 104 ntBASIC3.14□□□□□ -1.91
CXCL1P09341 AC083982.1-201ENST00000485679 344 ntBASIC3.14□□□□□ -1.91
CXCL1P09341 UBE2Q2P10-201ENST00000514854 900 ntBASIC3.14□□□□□ -1.91
CXCL1P09341 RNA5SP92-201ENST00000516437 110 ntBASIC3.14□□□□□ -1.91
CXCL1P09341 RN7SKP83-201ENST00000516512 178 ntBASIC3.14□□□□□ -1.91
CXCL1P09341 RNA5SP34-201ENST00000516887 130 ntBASIC3.14□□□□□ -1.91
CXCL1P09341 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.14□□□□□ -1.91
CXCL1P09341 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC3.14□□□□□ -1.91
CXCL1P09341 OR5BC1P-201ENST00000529327 739 ntBASIC3.14□□□□□ -1.91
CXCL1P09341 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.14□□□□□ -1.91
CXCL1P09341 AC005000.1-201ENST00000536192 288 ntBASIC3.14□□□□□ -1.91
CXCL1P09341 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC3.14□□□□□ -1.91
CXCL1P09341 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.14□□□□□ -1.91
CXCL1P09341 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.14□□□□□ -1.91
CXCL1P09341 BRDTP1-201ENST00000605735 677 ntBASIC3.14□□□□□ -1.91
CXCL1P09341 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.14□□□□□ -1.91
CXCL1P09341 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms