Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
MMP3P08254 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC5.07□□□□□ -1.6
MMP3P08254 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
MMP3P08254 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.07□□□□□ -1.6
MMP3P08254 STX3-208ENST00000641815 3236 ntBASIC5.07□□□□□ -1.6
MMP3P08254 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
MMP3P08254 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
MMP3P08254 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
MMP3P08254 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
MMP3P08254 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
MMP3P08254 RNU1-130P-201ENST00000363930 160 ntBASIC5.07□□□□□ -1.6
MMP3P08254 RNA5SP515-201ENST00000364570 118 ntBASIC5.07□□□□□ -1.6
MMP3P08254 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC5.07□□□□□ -1.6
MMP3P08254 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC5.07□□□□□ -1.6
MMP3P08254 AC011933.1-201ENST00000413334 321 ntBASIC5.07□□□□□ -1.6
MMP3P08254 CKS1BP6-201ENST00000424932 240 ntBASIC5.07□□□□□ -1.6
MMP3P08254 VTI1BP4-201ENST00000427516 527 ntBASIC5.07□□□□□ -1.6
MMP3P08254 AC005189.1-201ENST00000431286 310 ntBASIC5.07□□□□□ -1.6
MMP3P08254 MTCO1P53-201ENST00000441633 699 ntBASIC5.07□□□□□ -1.6
MMP3P08254 HNRNPDLP3-201ENST00000456745 380 ntBASIC5.07□□□□□ -1.6
MMP3P08254 AC116533.1-201ENST00000459748 321 ntBASIC5.07□□□□□ -1.6
MMP3P08254 AC091153.1-201ENST00000466297 402 ntBASIC5.07□□□□□ -1.6
MMP3P08254 AC068587.2-201ENST00000478386 781 ntBASIC5.07□□□□□ -1.6
MMP3P08254 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
MMP3P08254 AC093824.1-201ENST00000508796 343 ntBASIC5.07□□□□□ -1.6
MMP3P08254 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
MMP3P08254 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
MMP3P08254 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC5.07□□□□□ -1.6
MMP3P08254 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC5.07□□□□□ -1.6
MMP3P08254 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
MMP3P08254 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC5.07□□□□□ -1.6
MMP3P08254 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC5.07□□□□□ -1.6
MMP3P08254 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC5.07□□□□□ -1.6
MMP3P08254 AC011477.5-201ENST00000586571 259 ntBASIC5.07□□□□□ -1.6
MMP3P08254 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC5.07□□□□□ -1.6
MMP3P08254 AL160237.3-201ENST00000604114 1013 ntBASIC5.07□□□□□ -1.6
MMP3P08254 AC020634.1-201ENST00000608701 549 ntBASIC5.07□□□□□ -1.6
MMP3P08254 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.07□□□□□ -1.6
MMP3P08254 AC009159.2-201ENST00000617603 606 ntBASIC5.07□□□□□ -1.6
MMP3P08254 AL445567.2-201ENST00000618935 498 ntBASIC5.07□□□□□ -1.6
MMP3P08254 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC5.07□□□□□ -1.6
MMP3P08254 AL109659.3-201ENST00000624985 950 ntBASIC5.07□□□□□ -1.6
MMP3P08254 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
MMP3P08254 LINC01808-202ENST00000641680 1116 ntBASIC5.07□□□□□ -1.6
MMP3P08254 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
MMP3P08254 AC245100.2-201ENST00000454544 1679 ntBASIC5.07□□□□□ -1.6
MMP3P08254 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.07□□□□□ -1.6
MMP3P08254 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
MMP3P08254 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
MMP3P08254 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.07□□□□□ -1.6
MMP3P08254 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
MMP3P08254 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
MMP3P08254 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.06□□□□□ -1.6
MMP3P08254 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
MMP3P08254 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
MMP3P08254 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
MMP3P08254 AC090017.1-201ENST00000548612 1779 ntBASIC5.06□□□□□ -1.6
MMP3P08254 AC010300.1-201ENST00000600671 5134 ntBASIC5.06□□□□□ -1.6
MMP3P08254 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.06□□□□□ -1.6
MMP3P08254 NRK-204ENST00000540278 1687 ntTSL 2 BASIC5.06□□□□□ -1.6
MMP3P08254 AC017079.1-201ENST00000333650 415 ntBASIC5.06□□□□□ -1.6
MMP3P08254 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
MMP3P08254 RPL31-204ENST00000409038 817 ntTSL 2 BASIC5.06□□□□□ -1.6
MMP3P08254 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC5.06□□□□□ -1.6
MMP3P08254 AC234781.4-201ENST00000419384 244 ntBASIC5.06□□□□□ -1.6
MMP3P08254 SLC4A1APP1-201ENST00000419995 602 ntBASIC5.06□□□□□ -1.6
MMP3P08254 TEX41-203ENST00000420472 765 ntTSL 3 BASIC5.06□□□□□ -1.6
MMP3P08254 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC5.06□□□□□ -1.6
MMP3P08254 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC5.06□□□□□ -1.6
MMP3P08254 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC5.06□□□□□ -1.6
MMP3P08254 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.06□□□□□ -1.6
MMP3P08254 RPS3AP54-201ENST00000435535 734 ntBASIC5.06□□□□□ -1.6
MMP3P08254 ACTR3P2-201ENST00000439585 1257 ntBASIC5.06□□□□□ -1.6
MMP3P08254 AC023512.1-201ENST00000444513 499 ntBASIC5.06□□□□□ -1.6
MMP3P08254 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.06□□□□□ -1.6
MMP3P08254 AL096803.2-201ENST00000450032 677 ntBASIC5.06□□□□□ -1.6
MMP3P08254 RHEBP2-201ENST00000450289 600 ntBASIC5.06□□□□□ -1.6
MMP3P08254 AC008280.2-201ENST00000455473 307 ntBASIC5.06□□□□□ -1.6
MMP3P08254 RPL7AP52-201ENST00000458096 790 ntBASIC5.06□□□□□ -1.6
MMP3P08254 PSMC1P13-201ENST00000458195 985 ntBASIC5.06□□□□□ -1.6
MMP3P08254 TPT1P1-201ENST00000458495 518 ntBASIC5.06□□□□□ -1.6
MMP3P08254 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC5.06□□□□□ -1.6
MMP3P08254 RPS20P4-201ENST00000461659 355 ntBASIC5.06□□□□□ -1.6
MMP3P08254 RPL7AP28-201ENST00000464513 571 ntBASIC5.06□□□□□ -1.6
MMP3P08254 F11-205ENST00000492972 1204 ntTSL 2 BASIC5.06□□□□□ -1.6
MMP3P08254 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC5.06□□□□□ -1.6
MMP3P08254 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC5.06□□□□□ -1.6
MMP3P08254 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.06□□□□□ -1.6
MMP3P08254 RN7SKP265-201ENST00000516448 223 ntBASIC5.06□□□□□ -1.6
MMP3P08254 AP001207.2-201ENST00000519490 539 ntBASIC5.06□□□□□ -1.6
MMP3P08254 CYCSP29-201ENST00000533731 318 ntBASIC5.06□□□□□ -1.6
MMP3P08254 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC5.06□□□□□ -1.6
MMP3P08254 MTCYBP23-201ENST00000558717 1102 ntBASIC5.06□□□□□ -1.6
MMP3P08254 AL109618.2-201ENST00000605527 211 ntBASIC5.06□□□□□ -1.6
MMP3P08254 AC091979.2-201ENST00000607514 214 ntBASIC5.06□□□□□ -1.6
MMP3P08254 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC5.06□□□□□ -1.6
MMP3P08254 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC5.06□□□□□ -1.6
MMP3P08254 OR2L1P-202ENST00000641567 1023 ntBASIC5.06□□□□□ -1.6
MMP3P08254 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
MMP3P08254 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms