Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC5.68□□□□□ -1.5
HLA-DOAP06340 AC209154.1-201ENST00000582156 337 ntBASIC5.68□□□□□ -1.5
HLA-DOAP06340 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC5.68□□□□□ -1.5
HLA-DOAP06340 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC5.68□□□□□ -1.5
HLA-DOAP06340 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC5.68□□□□□ -1.5
HLA-DOAP06340 AC010975.3-201ENST00000618727 978 ntBASIC5.68□□□□□ -1.5
HLA-DOAP06340 AC092159.4-201ENST00000624944 550 ntBASIC5.68□□□□□ -1.5
HLA-DOAP06340 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.68□□□□□ -1.5
HLA-DOAP06340 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC5.68□□□□□ -1.5
HLA-DOAP06340 OR8B1P-202ENST00000641132 1178 ntBASIC5.68□□□□□ -1.5
HLA-DOAP06340 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HLA-DOAP06340 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.68□□□□□ -1.5
HLA-DOAP06340 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HLA-DOAP06340 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.68□□□□□ -1.5
HLA-DOAP06340 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.68□□□□□ -1.5
HLA-DOAP06340 DDX18P5-201ENST00000534547 1306 ntBASIC5.68□□□□□ -1.5
HLA-DOAP06340 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC5.68□□□□□ -1.5
HLA-DOAP06340 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.68□□□□□ -1.5
HLA-DOAP06340 AC015813.6-201ENST00000624409 5808 ntBASIC5.68□□□□□ -1.5
HLA-DOAP06340 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HLA-DOAP06340 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.67□□□□□ -1.5
HLA-DOAP06340 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.67□□□□□ -1.5
HLA-DOAP06340 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
HLA-DOAP06340 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.67□□□□□ -1.5
HLA-DOAP06340 AC002525.1-201ENST00000624392 1622 ntBASIC5.67□□□□□ -1.5
HLA-DOAP06340 DHX40P1-201ENST00000588725 1412 ntBASIC5.67□□□□□ -1.5
HLA-DOAP06340 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
HLA-DOAP06340 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HLA-DOAP06340 Y_RNA.51-201ENST00000362725 102 ntBASIC5.67□□□□□ -1.5
HLA-DOAP06340 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HLA-DOAP06340 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
HLA-DOAP06340 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC5.67□□□□□ -1.5
HLA-DOAP06340 RPL7P27-201ENST00000403775 720 ntBASIC5.67□□□□□ -1.5
HLA-DOAP06340 MFSD13B-201ENST00000420133 1290 ntBASIC5.67□□□□□ -1.5
HLA-DOAP06340 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.67□□□□□ -1.5
HLA-DOAP06340 MOB1AP1-201ENST00000430903 535 ntBASIC5.67□□□□□ -1.5
HLA-DOAP06340 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC5.67□□□□□ -1.5
HLA-DOAP06340 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC5.67□□□□□ -1.5
HLA-DOAP06340 EXTL2P1-201ENST00000446218 416 ntBASIC5.67□□□□□ -1.5
HLA-DOAP06340 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC5.67□□□□□ -1.5
HLA-DOAP06340 RPS27AP8-201ENST00000452665 445 ntBASIC5.67□□□□□ -1.5
HLA-DOAP06340 MTCO3P16-201ENST00000454456 754 ntBASIC5.67□□□□□ -1.5
HLA-DOAP06340 snoU13.1-201ENST00000459157 104 ntBASIC5.67□□□□□ -1.5
HLA-DOAP06340 RPS3AP43-201ENST00000479743 781 ntBASIC5.67□□□□□ -1.5
HLA-DOAP06340 AC107398.1-201ENST00000486904 505 ntBASIC5.67□□□□□ -1.5
HLA-DOAP06340 MYL12BP2-201ENST00000503948 512 ntBASIC5.67□□□□□ -1.5
HLA-DOAP06340 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC5.67□□□□□ -1.5
HLA-DOAP06340 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.67□□□□□ -1.5
HLA-DOAP06340 AC008494.2-201ENST00000514544 370 ntBASIC5.67□□□□□ -1.5
HLA-DOAP06340 AC105031.1-201ENST00000518550 476 ntBASIC5.67□□□□□ -1.5
HLA-DOAP06340 PTS-202ENST00000524931 696 ntTSL 3 BASIC5.67□□□□□ -1.5
HLA-DOAP06340 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HLA-DOAP06340 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC5.67□□□□□ -1.5
HLA-DOAP06340 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HLA-DOAP06340 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC5.67□□□□□ -1.5
HLA-DOAP06340 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC5.67□□□□□ -1.5
HLA-DOAP06340 AC018552.1-201ENST00000562099 811 ntBASIC5.67□□□□□ -1.5
HLA-DOAP06340 MIR5096-201ENST00000583713 70 ntBASIC5.67□□□□□ -1.5
HLA-DOAP06340 MRPS35P3-201ENST00000603189 709 ntBASIC5.67□□□□□ -1.5
HLA-DOAP06340 AL583856.2-201ENST00000606298 543 ntBASIC5.67□□□□□ -1.5
HLA-DOAP06340 HULC.1-201ENST00000612720 240 ntBASIC5.67□□□□□ -1.5
HLA-DOAP06340 MIR6810-201ENST00000622701 70 ntBASIC5.67□□□□□ -1.5
HLA-DOAP06340 AC012414.7-202ENST00000622705 1090 ntBASIC5.67□□□□□ -1.5
HLA-DOAP06340 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC5.67□□□□□ -1.5
HLA-DOAP06340 AC103706.2-201ENST00000638080 240 ntBASIC5.67□□□□□ -1.5
HLA-DOAP06340 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
HLA-DOAP06340 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HLA-DOAP06340 ZNF736P9Y-201ENST00000439586 1345 ntBASIC5.67□□□□□ -1.5
HLA-DOAP06340 AC093909.5-201ENST00000621839 1799 ntBASIC5.67□□□□□ -1.5
HLA-DOAP06340 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.67□□□□□ -1.5
HLA-DOAP06340 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HLA-DOAP06340 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HLA-DOAP06340 ELL2P3-201ENST00000457883 1602 ntBASIC5.66□□□□□ -1.5
HLA-DOAP06340 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.66□□□□□ -1.5
HLA-DOAP06340 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
HLA-DOAP06340 AC009643.2-201ENST00000603543 1448 ntBASIC5.66□□□□□ -1.5
HLA-DOAP06340 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
HLA-DOAP06340 AL132640.2-201ENST00000559968 1698 ntBASIC5.66□□□□□ -1.5
HLA-DOAP06340 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HLA-DOAP06340 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HLA-DOAP06340 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC5.66□□□□□ -1.5
HLA-DOAP06340 AC104623.2-202ENST00000623477 4002 ntBASIC5.66□□□□□ -1.5
HLA-DOAP06340 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.66□□□□□ -1.5
HLA-DOAP06340 RNA5-8SP7-201ENST00000363443 155 ntBASIC5.66□□□□□ -1.5
HLA-DOAP06340 RNU4-24P-201ENST00000364565 139 ntBASIC5.66□□□□□ -1.5
HLA-DOAP06340 RNU1-82P-201ENST00000390851 165 ntBASIC5.66□□□□□ -1.5
HLA-DOAP06340 Y_RNA.578-201ENST00000390903 88 ntBASIC5.66□□□□□ -1.5
HLA-DOAP06340 AL049697.2-201ENST00000403708 294 ntBASIC5.66□□□□□ -1.5
HLA-DOAP06340 RN7SKP267-201ENST00000410381 285 ntBASIC5.66□□□□□ -1.5
HLA-DOAP06340 MTND4P22-201ENST00000413116 1169 ntBASIC5.66□□□□□ -1.5
HLA-DOAP06340 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC5.66□□□□□ -1.5
HLA-DOAP06340 ATG4AP1-201ENST00000416893 538 ntBASIC5.66□□□□□ -1.5
HLA-DOAP06340 ELOCP9-201ENST00000418624 239 ntBASIC5.66□□□□□ -1.5
HLA-DOAP06340 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC5.66□□□□□ -1.5
HLA-DOAP06340 C1DP1-201ENST00000426049 402 ntBASIC5.66□□□□□ -1.5
HLA-DOAP06340 AL390023.1-201ENST00000428836 262 ntBASIC5.66□□□□□ -1.5
HLA-DOAP06340 CNOT7P1-201ENST00000429006 852 ntBASIC5.66□□□□□ -1.5
HLA-DOAP06340 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC5.66□□□□□ -1.5
HLA-DOAP06340 PTGES3P1-201ENST00000439531 483 ntBASIC5.66□□□□□ -1.5
HLA-DOAP06340 MTND2P19-201ENST00000449129 1012 ntBASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms