Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.72□□□□□ -1.81
SPTA1P02549 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
SPTA1P02549 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC3.72□□□□□ -1.81
SPTA1P02549 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SPTA1P02549 IL6STP1-201ENST00000346911 1020 ntBASIC3.72□□□□□ -1.81
SPTA1P02549 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SPTA1P02549 MIR30B-201ENST00000384850 88 ntBASIC3.72□□□□□ -1.81
SPTA1P02549 AL590806.1-201ENST00000415818 853 ntBASIC3.72□□□□□ -1.81
SPTA1P02549 AL158156.1-201ENST00000422509 473 ntBASIC3.72□□□□□ -1.81
SPTA1P02549 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
SPTA1P02549 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.72□□□□□ -1.81
SPTA1P02549 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.72□□□□□ -1.81
SPTA1P02549 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC3.72□□□□□ -1.81
SPTA1P02549 RPL7L1P13-201ENST00000511702 739 ntBASIC3.72□□□□□ -1.81
SPTA1P02549 RPL12P22-201ENST00000519073 490 ntBASIC3.72□□□□□ -1.81
SPTA1P02549 NDUFA5P2-201ENST00000519723 344 ntBASIC3.72□□□□□ -1.81
SPTA1P02549 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.72□□□□□ -1.81
SPTA1P02549 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
SPTA1P02549 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.72□□□□□ -1.81
SPTA1P02549 AL352979.3-201ENST00000553515 247 ntBASIC3.72□□□□□ -1.81
SPTA1P02549 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC3.72□□□□□ -1.81
SPTA1P02549 AC015912.2-201ENST00000571053 181 ntBASIC3.72□□□□□ -1.81
SPTA1P02549 AC119674.1-212ENST00000641155 993 ntBASIC3.72□□□□□ -1.81
SPTA1P02549 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.72□□□□□ -1.81
SPTA1P02549 AL355488.2-201ENST00000609909 2850 ntBASIC3.72□□□□□ -1.81
SPTA1P02549 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SPTA1P02549 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
SPTA1P02549 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.72□□□□□ -1.81
SPTA1P02549 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC3.72□□□□□ -1.81
SPTA1P02549 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SPTA1P02549 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.72□□□□□ -1.81
SPTA1P02549 AC116667.1-201ENST00000604855 2072 ntBASIC3.72□□□□□ -1.81
SPTA1P02549 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.72□□□□□ -1.81
SPTA1P02549 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
SPTA1P02549 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
SPTA1P02549 RNU1-44P-201ENST00000384453 163 ntBASIC3.72□□□□□ -1.81
SPTA1P02549 ATP5A1P2-201ENST00000412323 255 ntBASIC3.72□□□□□ -1.81
SPTA1P02549 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC3.72□□□□□ -1.81
SPTA1P02549 EIF4HP2-201ENST00000424380 563 ntBASIC3.72□□□□□ -1.81
SPTA1P02549 RPL7P44-201ENST00000424827 742 ntBASIC3.72□□□□□ -1.81
SPTA1P02549 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC3.72□□□□□ -1.81
SPTA1P02549 RPS4XP12-201ENST00000461747 709 ntBASIC3.72□□□□□ -1.81
SPTA1P02549 AC004924.1-201ENST00000480160 781 ntBASIC3.72□□□□□ -1.81
SPTA1P02549 RPL7P23-201ENST00000493874 747 ntBASIC3.72□□□□□ -1.81
SPTA1P02549 RNA5SP446-201ENST00000515955 82 ntBASIC3.72□□□□□ -1.81
SPTA1P02549 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC3.72□□□□□ -1.81
SPTA1P02549 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC3.72□□□□□ -1.81
SPTA1P02549 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.72□□□□□ -1.81
SPTA1P02549 AC087477.6-201ENST00000559595 843 ntBASIC3.72□□□□□ -1.81
SPTA1P02549 AC090312.1-201ENST00000580637 348 ntBASIC3.72□□□□□ -1.81
SPTA1P02549 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SPTA1P02549 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SPTA1P02549 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
SPTA1P02549 SCN1A-220ENST00000641603 12506 ntBASIC3.71□□□□□ -1.81
SPTA1P02549 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC3.71□□□□□ -1.82
SPTA1P02549 AL031121.1-201ENST00000406553 254 ntBASIC3.71□□□□□ -1.82
SPTA1P02549 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC3.71□□□□□ -1.82
SPTA1P02549 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC3.71□□□□□ -1.82
SPTA1P02549 TBCA-203ENST00000517679 545 ntTSL 3 BASIC3.71□□□□□ -1.82
SPTA1P02549 IGKV2D-19-201ENST00000523346 262 ntBASIC3.71□□□□□ -1.82
SPTA1P02549 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.71□□□□□ -1.82
SPTA1P02549 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC3.71□□□□□ -1.82
SPTA1P02549 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.71□□□□□ -1.82
SPTA1P02549 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC3.71□□□□□ -1.82
SPTA1P02549 BDH2P1-201ENST00000602288 736 ntBASIC3.71□□□□□ -1.82
SPTA1P02549 AC138907.10-201ENST00000623708 983 ntBASIC3.71□□□□□ -1.82
SPTA1P02549 AP001273.1-201ENST00000624493 3152 ntBASIC3.71□□□□□ -1.82
SPTA1P02549 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
SPTA1P02549 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.71□□□□□ -1.82
SPTA1P02549 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC3.71□□□□□ -1.82
SPTA1P02549 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
SPTA1P02549 AC021242.1-201ENST00000507315 2035 ntBASIC3.71□□□□□ -1.82
SPTA1P02549 SNORA60-201ENST00000362396 134 ntBASIC3.71□□□□□ -1.82
SPTA1P02549 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.71□□□□□ -1.82
SPTA1P02549 RNU4-6P-201ENST00000410804 122 ntBASIC3.71□□□□□ -1.82
SPTA1P02549 RANP8-201ENST00000444720 713 ntBASIC3.71□□□□□ -1.82
SPTA1P02549 RHEBP2-201ENST00000450289 600 ntBASIC3.71□□□□□ -1.82
SPTA1P02549 AC020893.1-201ENST00000502452 580 ntBASIC3.71□□□□□ -1.82
SPTA1P02549 SCARNA14-201ENST00000516903 136 ntBASIC3.71□□□□□ -1.82
SPTA1P02549 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.71□□□□□ -1.82
SPTA1P02549 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.71□□□□□ -1.82
SPTA1P02549 CSNK1A1P1-202ENST00000563423 981 ntBASIC3.71□□□□□ -1.82
SPTA1P02549 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC3.71□□□□□ -1.82
SPTA1P02549 AC243654.2-201ENST00000612843 443 ntBASIC3.71□□□□□ -1.82
SPTA1P02549 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC3.71□□□□□ -1.82
SPTA1P02549 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
SPTA1P02549 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
SPTA1P02549 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC3.7□□□□□ -1.82
SPTA1P02549 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SPTA1P02549 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SPTA1P02549 AC139713.2-215ENST00000641428 5037 ntBASIC3.7□□□□□ -1.82
SPTA1P02549 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SPTA1P02549 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.7□□□□□ -1.82
SPTA1P02549 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.7□□□□□ -1.82
SPTA1P02549 SYF2P2-201ENST00000417620 583 ntBASIC3.7□□□□□ -1.82
SPTA1P02549 ZYG11AP1-201ENST00000430329 837 ntBASIC3.7□□□□□ -1.82
SPTA1P02549 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SPTA1P02549 RPL35AP15-201ENST00000468042 339 ntBASIC3.7□□□□□ -1.82
SPTA1P02549 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC3.7□□□□□ -1.82
SPTA1P02549 KRT19P6-201ENST00000510983 209 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 121.1 ms