Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
TNFP01375 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.95□□□□□ -1.78
TNFP01375 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
TNFP01375 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.95□□□□□ -1.78
TNFP01375 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
TNFP01375 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC3.95□□□□□ -1.78
TNFP01375 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC3.95□□□□□ -1.78
TNFP01375 TCEA1P4-201ENST00000415066 844 ntBASIC3.95□□□□□ -1.78
TNFP01375 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC3.95□□□□□ -1.78
TNFP01375 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC3.95□□□□□ -1.78
TNFP01375 Z95327.1-201ENST00000446082 482 ntBASIC3.95□□□□□ -1.78
TNFP01375 RPS11P1-201ENST00000451072 473 ntBASIC3.95□□□□□ -1.78
TNFP01375 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC3.95□□□□□ -1.78
TNFP01375 SNORA84-201ENST00000459229 133 ntBASIC3.95□□□□□ -1.78
TNFP01375 RN7SL271P-201ENST00000487601 295 ntBASIC3.95□□□□□ -1.78
TNFP01375 RNU1-45P-201ENST00000517191 141 ntBASIC3.95□□□□□ -1.78
TNFP01375 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC3.95□□□□□ -1.78
TNFP01375 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.95□□□□□ -1.78
TNFP01375 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.95□□□□□ -1.78
TNFP01375 HSPE1P5-201ENST00000561489 272 ntBASIC3.95□□□□□ -1.78
TNFP01375 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC3.95□□□□□ -1.78
TNFP01375 5S_rRNA.16-201ENST00000612928 119 ntBASIC3.95□□□□□ -1.78
TNFP01375 AL121890.2-201ENST00000617644 465 ntBASIC3.95□□□□□ -1.78
TNFP01375 AL645927.2-201ENST00000618350 349 ntBASIC3.95□□□□□ -1.78
TNFP01375 AC008785.1-201ENST00000624475 456 ntBASIC3.95□□□□□ -1.78
TNFP01375 MAPK10-304ENST00000641341 3984 ntBASIC3.95□□□□□ -1.78
TNFP01375 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
TNFP01375 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC3.95□□□□□ -1.78
TNFP01375 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
TNFP01375 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
TNFP01375 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.95□□□□□ -1.78
TNFP01375 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.94□□□□□ -1.78
TNFP01375 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC3.94□□□□□ -1.78
TNFP01375 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
TNFP01375 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
TNFP01375 CDY11P-201ENST00000447168 1651 ntBASIC3.94□□□□□ -1.78
TNFP01375 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC3.94□□□□□ -1.78
TNFP01375 HMGB3P19-201ENST00000403971 560 ntBASIC3.94□□□□□ -1.78
TNFP01375 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC3.94□□□□□ -1.78
TNFP01375 CYCSP19-201ENST00000411715 316 ntBASIC3.94□□□□□ -1.78
TNFP01375 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC3.94□□□□□ -1.78
TNFP01375 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC3.94□□□□□ -1.78
TNFP01375 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.94□□□□□ -1.78
TNFP01375 TBCAP1-201ENST00000436520 327 ntBASIC3.94□□□□□ -1.78
TNFP01375 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.94□□□□□ -1.78
TNFP01375 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.94□□□□□ -1.78
TNFP01375 RPL21P129-201ENST00000491732 478 ntBASIC3.94□□□□□ -1.78
TNFP01375 AC113430.1-201ENST00000506872 718 ntBASIC3.94□□□□□ -1.78
TNFP01375 RNA5SP179-201ENST00000517284 121 ntBASIC3.94□□□□□ -1.78
TNFP01375 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC3.94□□□□□ -1.78
TNFP01375 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC3.94□□□□□ -1.78
TNFP01375 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.94□□□□□ -1.78
TNFP01375 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
TNFP01375 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC3.94□□□□□ -1.78
TNFP01375 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.94□□□□□ -1.78
TNFP01375 AL139089.1-201ENST00000620372 975 ntBASIC3.94□□□□□ -1.78
TNFP01375 PDCD6IPP1-202ENST00000622242 1064 ntBASIC3.94□□□□□ -1.78
TNFP01375 AL354798.1-201ENST00000622505 329 ntBASIC3.94□□□□□ -1.78
TNFP01375 AC079298.2-201ENST00000623885 459 ntBASIC3.94□□□□□ -1.78
TNFP01375 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.94□□□□□ -1.78
TNFP01375 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
TNFP01375 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
TNFP01375 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.94□□□□□ -1.78
TNFP01375 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC3.94□□□□□ -1.78
TNFP01375 AL122126.1-201ENST00000546905 1318 ntBASIC3.94□□□□□ -1.78
TNFP01375 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
TNFP01375 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.93□□□□□ -1.78
TNFP01375 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
TNFP01375 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.93□□□□□ -1.78
TNFP01375 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
TNFP01375 MTCO1P22-201ENST00000604619 1360 ntBASIC3.93□□□□□ -1.78
TNFP01375 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
TNFP01375 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
TNFP01375 IL6STP1-201ENST00000346911 1020 ntBASIC3.93□□□□□ -1.78
TNFP01375 RNA5SP97-201ENST00000365006 84 ntBASIC3.93□□□□□ -1.78
TNFP01375 SNORA62.3-201ENST00000365110 153 ntBASIC3.93□□□□□ -1.78
TNFP01375 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
TNFP01375 RNU6-213P-201ENST00000384051 104 ntBASIC3.93□□□□□ -1.78
TNFP01375 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
TNFP01375 RNU6ATAC-201ENST00000408749 126 ntBASIC3.93□□□□□ -1.78
TNFP01375 AC007389.2-201ENST00000434630 306 ntBASIC3.93□□□□□ -1.78
TNFP01375 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.93□□□□□ -1.78
TNFP01375 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.93□□□□□ -1.78
TNFP01375 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC3.93□□□□□ -1.78
TNFP01375 FABP3P2-201ENST00000453169 399 ntBASIC3.93□□□□□ -1.78
TNFP01375 HCG17-214ENST00000453558 732 ntTSL 5 BASIC3.93□□□□□ -1.78
TNFP01375 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC3.93□□□□□ -1.78
TNFP01375 AL139099.1-201ENST00000497398 403 ntBASIC3.93□□□□□ -1.78
TNFP01375 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC3.93□□□□□ -1.78
TNFP01375 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC3.93□□□□□ -1.78
TNFP01375 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
TNFP01375 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC3.93□□□□□ -1.78
TNFP01375 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC3.93□□□□□ -1.78
TNFP01375 AC107982.3-201ENST00000584957 985 ntBASIC3.93□□□□□ -1.78
TNFP01375 AC091167.4-201ENST00000605079 184 ntBASIC3.93□□□□□ -1.78
TNFP01375 MIR432-201ENST00000606207 94 ntBASIC3.93□□□□□ -1.78
TNFP01375 AC244517.3-201ENST00000616254 1235 ntBASIC3.93□□□□□ -1.78
TNFP01375 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC3.93□□□□□ -1.78
TNFP01375 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.93□□□□□ -1.78
TNFP01375 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms