Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
PDGFBP01127 AP000942.1-201ENST00000463969 747 ntBASIC4.61□□□□□ -1.67
PDGFBP01127 RPL23AP2-201ENST00000471227 466 ntBASIC4.61□□□□□ -1.67
PDGFBP01127 VN1R105P-201ENST00000486595 910 ntBASIC4.61□□□□□ -1.67
PDGFBP01127 OR9N1P-202ENST00000494289 481 ntBASIC4.61□□□□□ -1.67
PDGFBP01127 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.61□□□□□ -1.67
PDGFBP01127 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC4.61□□□□□ -1.67
PDGFBP01127 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC4.61□□□□□ -1.67
PDGFBP01127 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC4.61□□□□□ -1.67
PDGFBP01127 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC4.61□□□□□ -1.67
PDGFBP01127 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC4.61□□□□□ -1.67
PDGFBP01127 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC4.61□□□□□ -1.67
PDGFBP01127 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC4.61□□□□□ -1.67
PDGFBP01127 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC4.61□□□□□ -1.67
PDGFBP01127 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.61□□□□□ -1.67
PDGFBP01127 AC090515.3-201ENST00000560431 315 ntBASIC4.61□□□□□ -1.67
PDGFBP01127 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.61□□□□□ -1.67
PDGFBP01127 AC133552.5-201ENST00000604266 540 ntBASIC4.61□□□□□ -1.67
PDGFBP01127 AC090525.3-201ENST00000605601 189 ntBASIC4.61□□□□□ -1.67
PDGFBP01127 AL162233.1-201ENST00000620014 944 ntBASIC4.61□□□□□ -1.67
PDGFBP01127 CR392039.5-201ENST00000623201 510 ntBASIC4.61□□□□□ -1.67
PDGFBP01127 LINC01808-202ENST00000641680 1116 ntBASIC4.61□□□□□ -1.67
PDGFBP01127 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.61□□□□□ -1.67
PDGFBP01127 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
PDGFBP01127 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.61□□□□□ -1.67
PDGFBP01127 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC4.61□□□□□ -1.67
PDGFBP01127 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
PDGFBP01127 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.61□□□□□ -1.67
PDGFBP01127 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.61□□□□□ -1.67
PDGFBP01127 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.61□□□□□ -1.67
PDGFBP01127 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
PDGFBP01127 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
PDGFBP01127 AC010300.1-201ENST00000600671 5134 ntBASIC4.6□□□□□ -1.67
PDGFBP01127 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
PDGFBP01127 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
PDGFBP01127 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
PDGFBP01127 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
PDGFBP01127 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
PDGFBP01127 MIR331-201ENST00000362302 94 ntBASIC4.6□□□□□ -1.67
PDGFBP01127 SNORA62.2-201ENST00000364672 152 ntBASIC4.6□□□□□ -1.67
PDGFBP01127 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
PDGFBP01127 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.6□□□□□ -1.67
PDGFBP01127 Z86062.1-201ENST00000406773 777 ntBASIC4.6□□□□□ -1.67
PDGFBP01127 RPL31P52-201ENST00000407532 367 ntBASIC4.6□□□□□ -1.67
PDGFBP01127 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC4.6□□□□□ -1.67
PDGFBP01127 RPL12P9-201ENST00000412942 488 ntBASIC4.6□□□□□ -1.67
PDGFBP01127 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC4.6□□□□□ -1.67
PDGFBP01127 E2F6P2-201ENST00000420708 748 ntBASIC4.6□□□□□ -1.67
PDGFBP01127 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC4.6□□□□□ -1.67
PDGFBP01127 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.6□□□□□ -1.67
PDGFBP01127 AC092162.1-201ENST00000432828 434 ntBASIC4.6□□□□□ -1.67
PDGFBP01127 AL031663.1-201ENST00000437445 219 ntBASIC4.6□□□□□ -1.67
PDGFBP01127 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC4.6□□□□□ -1.67
PDGFBP01127 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.6□□□□□ -1.67
PDGFBP01127 RPL6P5-201ENST00000445678 828 ntBASIC4.6□□□□□ -1.67
PDGFBP01127 RN7SL517P-201ENST00000462240 305 ntBASIC4.6□□□□□ -1.67
PDGFBP01127 RPL7P49-201ENST00000471402 708 ntBASIC4.6□□□□□ -1.67
PDGFBP01127 AC010683.1-201ENST00000473673 378 ntBASIC4.6□□□□□ -1.67
PDGFBP01127 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.6□□□□□ -1.67
PDGFBP01127 ENPP7P11-201ENST00000505915 627 ntBASIC4.6□□□□□ -1.67
PDGFBP01127 COL6A4P2-205ENST00000509855 506 ntBASIC4.6□□□□□ -1.67
PDGFBP01127 MTND2P31-201ENST00000512602 616 ntBASIC4.6□□□□□ -1.67
PDGFBP01127 SNORD116-26-201ENST00000516006 96 ntBASIC4.6□□□□□ -1.67
PDGFBP01127 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.6□□□□□ -1.67
PDGFBP01127 AP003168.1-201ENST00000530091 307 ntBASIC4.6□□□□□ -1.67
PDGFBP01127 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.6□□□□□ -1.67
PDGFBP01127 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC4.6□□□□□ -1.67
PDGFBP01127 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.6□□□□□ -1.67
PDGFBP01127 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC4.6□□□□□ -1.67
PDGFBP01127 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC4.6□□□□□ -1.67
PDGFBP01127 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.6□□□□□ -1.67
PDGFBP01127 AL096803.3-201ENST00000609032 532 ntBASIC4.6□□□□□ -1.67
PDGFBP01127 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.6□□□□□ -1.67
PDGFBP01127 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.6□□□□□ -1.67
PDGFBP01127 AC007546.1-201ENST00000619452 559 ntBASIC4.6□□□□□ -1.67
PDGFBP01127 MIR8059-201ENST00000620427 81 ntBASIC4.6□□□□□ -1.67
PDGFBP01127 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC4.6□□□□□ -1.67
PDGFBP01127 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.6□□□□□ -1.67
PDGFBP01127 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.6□□□□□ -1.67
PDGFBP01127 AC091948.2-201ENST00000636510 279 ntBASIC4.6□□□□□ -1.67
PDGFBP01127 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC4.6□□□□□ -1.67
PDGFBP01127 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.6□□□□□ -1.67
PDGFBP01127 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.6□□□□□ -1.67
PDGFBP01127 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
PDGFBP01127 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
PDGFBP01127 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
PDGFBP01127 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.6□□□□□ -1.67
PDGFBP01127 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.6□□□□□ -1.67
PDGFBP01127 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC4.6□□□□□ -1.67
PDGFBP01127 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
PDGFBP01127 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
PDGFBP01127 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
PDGFBP01127 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
PDGFBP01127 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.6□□□□□ -1.67
PDGFBP01127 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.59□□□□□ -1.67
PDGFBP01127 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
PDGFBP01127 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.59□□□□□ -1.67
PDGFBP01127 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
PDGFBP01127 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
PDGFBP01127 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms