Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC4.87□□□□□ -1.63
SMAD6O43541 CYCSP11-201ENST00000436426 315 ntBASIC4.87□□□□□ -1.63
SMAD6O43541 NPM1P33-201ENST00000438918 872 ntBASIC4.87□□□□□ -1.63
SMAD6O43541 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC4.87□□□□□ -1.63
SMAD6O43541 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC4.87□□□□□ -1.63
SMAD6O43541 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC4.87□□□□□ -1.63
SMAD6O43541 MTND2P28-201ENST00000457540 1044 ntBASIC4.87□□□□□ -1.63
SMAD6O43541 RPS17P11-201ENST00000474297 293 ntBASIC4.87□□□□□ -1.63
SMAD6O43541 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC4.87□□□□□ -1.63
SMAD6O43541 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.87□□□□□ -1.63
SMAD6O43541 RAP1BP2-201ENST00000478270 544 ntBASIC4.87□□□□□ -1.63
SMAD6O43541 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC4.87□□□□□ -1.63
SMAD6O43541 AC134050.1-201ENST00000495088 933 ntBASIC4.87□□□□□ -1.63
SMAD6O43541 AC010374.1-201ENST00000503762 1237 ntBASIC4.87□□□□□ -1.63
SMAD6O43541 AC073358.1-201ENST00000505671 684 ntBASIC4.87□□□□□ -1.63
SMAD6O43541 Y_RNA.719-201ENST00000517156 106 ntBASIC4.87□□□□□ -1.63
SMAD6O43541 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.87□□□□□ -1.63
SMAD6O43541 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.87□□□□□ -1.63
SMAD6O43541 AC087373.1-201ENST00000524920 491 ntBASIC4.87□□□□□ -1.63
SMAD6O43541 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.87□□□□□ -1.63
SMAD6O43541 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SMAD6O43541 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.87□□□□□ -1.63
SMAD6O43541 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.87□□□□□ -1.63
SMAD6O43541 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.87□□□□□ -1.63
SMAD6O43541 NOP56P3-201ENST00000549457 385 ntBASIC4.87□□□□□ -1.63
SMAD6O43541 AC063949.1-201ENST00000552900 865 ntBASIC4.87□□□□□ -1.63
SMAD6O43541 AC092868.3-201ENST00000560515 784 ntBASIC4.87□□□□□ -1.63
SMAD6O43541 AC009094.1-201ENST00000564443 426 ntBASIC4.87□□□□□ -1.63
SMAD6O43541 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.87□□□□□ -1.63
SMAD6O43541 AP005136.1-201ENST00000579765 429 ntBASIC4.87□□□□□ -1.63
SMAD6O43541 MIR3936-201ENST00000584304 110 ntBASIC4.87□□□□□ -1.63
SMAD6O43541 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC4.87□□□□□ -1.63
SMAD6O43541 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC4.87□□□□□ -1.63
SMAD6O43541 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC4.87□□□□□ -1.63
SMAD6O43541 AC093673.2-201ENST00000609674 331 ntBASIC4.87□□□□□ -1.63
SMAD6O43541 uc_338.18-201ENST00000615451 175 ntBASIC4.87□□□□□ -1.63
SMAD6O43541 AC105105.5-201ENST00000622635 1294 ntBASIC4.87□□□□□ -1.63
SMAD6O43541 AC017037.3-201ENST00000625016 472 ntBASIC4.87□□□□□ -1.63
SMAD6O43541 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SMAD6O43541 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
SMAD6O43541 LINC02211-204ENST00000642024 1070 ntBASIC4.87□□□□□ -1.63
SMAD6O43541 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SMAD6O43541 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.87□□□□□ -1.63
SMAD6O43541 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SMAD6O43541 AC099786.3-201ENST00000565735 1410 ntBASIC4.87□□□□□ -1.63
SMAD6O43541 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.87□□□□□ -1.63
SMAD6O43541 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.87□□□□□ -1.63
SMAD6O43541 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC4.87□□□□□ -1.63
SMAD6O43541 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SMAD6O43541 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SMAD6O43541 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SMAD6O43541 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SMAD6O43541 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
SMAD6O43541 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SMAD6O43541 SNORA56-201ENST00000383966 129 ntBASIC4.86□□□□□ -1.63
SMAD6O43541 RNU1-82P-201ENST00000390851 165 ntBASIC4.86□□□□□ -1.63
SMAD6O43541 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.86□□□□□ -1.63
SMAD6O43541 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC4.86□□□□□ -1.63
SMAD6O43541 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.86□□□□□ -1.63
SMAD6O43541 BX510359.2-201ENST00000417920 305 ntBASIC4.86□□□□□ -1.63
SMAD6O43541 MTND1P20-201ENST00000430341 950 ntBASIC4.86□□□□□ -1.63
SMAD6O43541 RPS7P2-201ENST00000435134 607 ntBASIC4.86□□□□□ -1.63
SMAD6O43541 MUPP-201ENST00000438111 566 ntBASIC4.86□□□□□ -1.63
SMAD6O43541 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.86□□□□□ -1.63
SMAD6O43541 Z99127.2-201ENST00000441426 334 ntBASIC4.86□□□□□ -1.63
SMAD6O43541 GTF3AP5-201ENST00000442645 697 ntBASIC4.86□□□□□ -1.63
SMAD6O43541 MTND1P27-201ENST00000451117 902 ntBASIC4.86□□□□□ -1.63
SMAD6O43541 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.86□□□□□ -1.63
SMAD6O43541 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.86□□□□□ -1.63
SMAD6O43541 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SMAD6O43541 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC4.86□□□□□ -1.63
SMAD6O43541 RPS29P22-201ENST00000472363 168 ntBASIC4.86□□□□□ -1.63
SMAD6O43541 RPL12P20-201ENST00000475538 479 ntBASIC4.86□□□□□ -1.63
SMAD6O43541 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.86□□□□□ -1.63
SMAD6O43541 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.86□□□□□ -1.63
SMAD6O43541 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.86□□□□□ -1.63
SMAD6O43541 AC113420.1-201ENST00000507903 571 ntBASIC4.86□□□□□ -1.63
SMAD6O43541 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.86□□□□□ -1.63
SMAD6O43541 AC090819.1-201ENST00000523800 1111 ntBASIC4.86□□□□□ -1.63
SMAD6O43541 PTS-202ENST00000524931 696 ntTSL 3 BASIC4.86□□□□□ -1.63
SMAD6O43541 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC4.86□□□□□ -1.63
SMAD6O43541 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC4.86□□□□□ -1.63
SMAD6O43541 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.86□□□□□ -1.63
SMAD6O43541 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.86□□□□□ -1.63
SMAD6O43541 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC4.86□□□□□ -1.63
SMAD6O43541 AL049830.4-201ENST00000555149 351 ntBASIC4.86□□□□□ -1.63
SMAD6O43541 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC4.86□□□□□ -1.63
SMAD6O43541 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.86□□□□□ -1.63
SMAD6O43541 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.86□□□□□ -1.63
SMAD6O43541 AC233702.9-201ENST00000581528 203 ntBASIC4.86□□□□□ -1.63
SMAD6O43541 AC061975.8-201ENST00000587058 721 ntBASIC4.86□□□□□ -1.63
SMAD6O43541 HMGB1P51-201ENST00000605166 638 ntBASIC4.86□□□□□ -1.63
SMAD6O43541 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC4.86□□□□□ -1.63
SMAD6O43541 MIR6748-201ENST00000610433 71 ntBASIC4.86□□□□□ -1.63
SMAD6O43541 AL136295.6-201ENST00000610486 658 ntBASIC4.86□□□□□ -1.63
SMAD6O43541 MIR6780A-201ENST00000615089 68 ntBASIC4.86□□□□□ -1.63
SMAD6O43541 RDM1-219ENST00000615378 542 ntTSL 3 BASIC4.86□□□□□ -1.63
SMAD6O43541 FRG1DP-201ENST00000635586 771 ntBASIC4.86□□□□□ -1.63
SMAD6O43541 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.86□□□□□ -1.63
SMAD6O43541 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms