Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 USP12PY-201ENST00000427677 1064 ntBASIC3.89□□□□□ -1.79
UPK1AO00322 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC3.89□□□□□ -1.79
UPK1AO00322 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC3.89□□□□□ -1.79
UPK1AO00322 RPL23AP46-201ENST00000438548 490 ntBASIC3.89□□□□□ -1.79
UPK1AO00322 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC3.89□□□□□ -1.79
UPK1AO00322 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC3.89□□□□□ -1.79
UPK1AO00322 RNA5SP246-201ENST00000458909 119 ntBASIC3.89□□□□□ -1.79
UPK1AO00322 AF213884.1-201ENST00000488102 463 ntBASIC3.89□□□□□ -1.79
UPK1AO00322 AC091167.1-201ENST00000492017 396 ntBASIC3.89□□□□□ -1.79
UPK1AO00322 HPRT1P2-201ENST00000505250 544 ntBASIC3.89□□□□□ -1.79
UPK1AO00322 AC108475.1-201ENST00000507880 950 ntBASIC3.89□□□□□ -1.79
UPK1AO00322 AC099522.1-202ENST00000514718 367 ntBASIC3.89□□□□□ -1.79
UPK1AO00322 AC034205.1-201ENST00000520621 638 ntBASIC3.89□□□□□ -1.79
UPK1AO00322 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.89□□□□□ -1.79
UPK1AO00322 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.89□□□□□ -1.79
UPK1AO00322 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
UPK1AO00322 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC3.89□□□□□ -1.79
UPK1AO00322 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC3.89□□□□□ -1.79
UPK1AO00322 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
UPK1AO00322 CCT8P1-201ENST00000413611 1657 ntBASIC3.89□□□□□ -1.79
UPK1AO00322 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
UPK1AO00322 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC3.89□□□□□ -1.79
UPK1AO00322 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.89□□□□□ -1.79
UPK1AO00322 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
UPK1AO00322 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
UPK1AO00322 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
UPK1AO00322 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
UPK1AO00322 AL031985.3-201ENST00000565390 2449 ntBASIC3.89□□□□□ -1.79
UPK1AO00322 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.88□□□□□ -1.79
UPK1AO00322 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.88□□□□□ -1.79
UPK1AO00322 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
UPK1AO00322 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
UPK1AO00322 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
UPK1AO00322 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.88□□□□□ -1.79
UPK1AO00322 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
UPK1AO00322 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.88□□□□□ -1.79
UPK1AO00322 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
UPK1AO00322 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
UPK1AO00322 MT-RNR1-201ENST00000389680 954 ntBASIC3.88□□□□□ -1.79
UPK1AO00322 HSPD1P16-201ENST00000402302 394 ntBASIC3.88□□□□□ -1.79
UPK1AO00322 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.88□□□□□ -1.79
UPK1AO00322 RPA2P2-201ENST00000419698 796 ntBASIC3.88□□□□□ -1.79
UPK1AO00322 RPL18P10-201ENST00000425606 538 ntBASIC3.88□□□□□ -1.79
UPK1AO00322 COX6B1P7-201ENST00000430845 235 ntBASIC3.88□□□□□ -1.79
UPK1AO00322 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC3.88□□□□□ -1.79
UPK1AO00322 BTF3P10-201ENST00000433415 495 ntBASIC3.88□□□□□ -1.79
UPK1AO00322 ATP5HP2-201ENST00000433885 485 ntBASIC3.88□□□□□ -1.79
UPK1AO00322 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.88□□□□□ -1.79
UPK1AO00322 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
UPK1AO00322 TPT1P13-201ENST00000449760 499 ntBASIC3.88□□□□□ -1.79
UPK1AO00322 MTCYBP14-201ENST00000457471 715 ntBASIC3.88□□□□□ -1.79
UPK1AO00322 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC3.88□□□□□ -1.79
UPK1AO00322 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC3.88□□□□□ -1.79
UPK1AO00322 AC093824.1-201ENST00000508796 343 ntBASIC3.88□□□□□ -1.79
UPK1AO00322 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC3.88□□□□□ -1.79
UPK1AO00322 SNORD116-30-201ENST00000516468 85 ntBASIC3.88□□□□□ -1.79
UPK1AO00322 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC3.88□□□□□ -1.79
UPK1AO00322 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC3.88□□□□□ -1.79
UPK1AO00322 C1GALT1P3-201ENST00000522049 819 ntBASIC3.88□□□□□ -1.79
UPK1AO00322 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC3.88□□□□□ -1.79
UPK1AO00322 AC079171.1-201ENST00000568788 914 ntBASIC3.88□□□□□ -1.79
UPK1AO00322 AC141257.3-201ENST00000572906 215 ntBASIC3.88□□□□□ -1.79
UPK1AO00322 AC022655.2-201ENST00000577280 318 ntBASIC3.88□□□□□ -1.79
UPK1AO00322 AP003392.5-201ENST00000607857 415 ntBASIC3.88□□□□□ -1.79
UPK1AO00322 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.88□□□□□ -1.79
UPK1AO00322 AC128687.2-201ENST00000609657 566 ntBASIC3.88□□□□□ -1.79
UPK1AO00322 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC3.88□□□□□ -1.79
UPK1AO00322 MIR486-1-201ENST00000612171 68 ntBASIC3.88□□□□□ -1.79
UPK1AO00322 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC3.88□□□□□ -1.79
UPK1AO00322 MIR3653-201ENST00000625572 110 ntBASIC3.88□□□□□ -1.79
UPK1AO00322 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC3.88□□□□□ -1.79
UPK1AO00322 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
UPK1AO00322 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
UPK1AO00322 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
UPK1AO00322 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
UPK1AO00322 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
UPK1AO00322 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.87□□□□□ -1.79
UPK1AO00322 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC3.87□□□□□ -1.79
UPK1AO00322 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC3.87□□□□□ -1.79
UPK1AO00322 ERCC6-202ENST00000374127 1782 ntBASIC3.87□□□□□ -1.79
UPK1AO00322 AC010300.1-201ENST00000600671 5134 ntBASIC3.87□□□□□ -1.79
UPK1AO00322 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
UPK1AO00322 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.87□□□□□ -1.79
UPK1AO00322 SNORA56-201ENST00000383966 129 ntBASIC3.87□□□□□ -1.79
UPK1AO00322 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC3.87□□□□□ -1.79
UPK1AO00322 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.87□□□□□ -1.79
UPK1AO00322 OR6C71P-201ENST00000432580 913 ntBASIC3.87□□□□□ -1.79
UPK1AO00322 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC3.87□□□□□ -1.79
UPK1AO00322 AC073143.1-201ENST00000436316 395 ntBASIC3.87□□□□□ -1.79
UPK1AO00322 HMGB1P16-201ENST00000447155 540 ntBASIC3.87□□□□□ -1.79
UPK1AO00322 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC3.87□□□□□ -1.79
UPK1AO00322 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC3.87□□□□□ -1.79
UPK1AO00322 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC3.87□□□□□ -1.79
UPK1AO00322 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.87□□□□□ -1.79
UPK1AO00322 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC3.87□□□□□ -1.79
UPK1AO00322 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.87□□□□□ -1.79
UPK1AO00322 AC006463.2-201ENST00000473326 348 ntBASIC3.87□□□□□ -1.79
UPK1AO00322 BLNK-209ENST00000495266 440 ntTSL 5 BASIC3.87□□□□□ -1.79
UPK1AO00322 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC3.87□□□□□ -1.79
UPK1AO00322 BTF3L4P4-201ENST00000506381 449 ntBASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 127.6 ms