Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 HMGB1P37-201ENST00000439613 609 ntBASIC3.58□□□□□ -1.84
TRAV27A0A087WT01 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC3.58□□□□□ -1.84
TRAV27A0A087WT01 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC3.58□□□□□ -1.84
TRAV27A0A087WT01 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.58□□□□□ -1.84
TRAV27A0A087WT01 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC3.58□□□□□ -1.84
TRAV27A0A087WT01 RN7SL860P-201ENST00000473738 223 ntBASIC3.58□□□□□ -1.84
TRAV27A0A087WT01 MTCYBP19-201ENST00000517463 1124 ntBASIC3.58□□□□□ -1.84
TRAV27A0A087WT01 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.58□□□□□ -1.84
TRAV27A0A087WT01 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC3.58□□□□□ -1.84
TRAV27A0A087WT01 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.58□□□□□ -1.84
TRAV27A0A087WT01 HMGB3P26-201ENST00000560051 582 ntBASIC3.58□□□□□ -1.84
TRAV27A0A087WT01 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.58□□□□□ -1.84
TRAV27A0A087WT01 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC3.58□□□□□ -1.84
TRAV27A0A087WT01 RN7SL600P-201ENST00000581811 299 ntBASIC3.58□□□□□ -1.84
TRAV27A0A087WT01 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.58□□□□□ -1.84
TRAV27A0A087WT01 MIR3138-201ENST00000585238 82 ntBASIC3.58□□□□□ -1.84
TRAV27A0A087WT01 MIR486-1-201ENST00000612171 68 ntBASIC3.58□□□□□ -1.84
TRAV27A0A087WT01 AC010608.2-201ENST00000624830 470 ntBASIC3.58□□□□□ -1.84
TRAV27A0A087WT01 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
TRAV27A0A087WT01 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
TRAV27A0A087WT01 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.58□□□□□ -1.84
TRAV27A0A087WT01 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
TRAV27A0A087WT01 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC3.57□□□□□ -1.84
TRAV27A0A087WT01 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
TRAV27A0A087WT01 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC3.57□□□□□ -1.84
TRAV27A0A087WT01 COX6CP15-201ENST00000426313 211 ntBASIC3.57□□□□□ -1.84
TRAV27A0A087WT01 USP12PY-201ENST00000427677 1064 ntBASIC3.57□□□□□ -1.84
TRAV27A0A087WT01 CEACAMP9-201ENST00000442990 513 ntBASIC3.57□□□□□ -1.84
TRAV27A0A087WT01 RANP8-201ENST00000444720 713 ntBASIC3.57□□□□□ -1.84
TRAV27A0A087WT01 RPS17P13-201ENST00000448974 407 ntBASIC3.57□□□□□ -1.84
TRAV27A0A087WT01 AL132838.2-201ENST00000492041 314 ntBASIC3.57□□□□□ -1.84
TRAV27A0A087WT01 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.57□□□□□ -1.84
TRAV27A0A087WT01 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
TRAV27A0A087WT01 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.57□□□□□ -1.84
TRAV27A0A087WT01 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.57□□□□□ -1.84
TRAV27A0A087WT01 CYCSP29-201ENST00000533731 318 ntBASIC3.57□□□□□ -1.84
TRAV27A0A087WT01 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC3.57□□□□□ -1.84
TRAV27A0A087WT01 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC3.57□□□□□ -1.84
TRAV27A0A087WT01 AL360157.1-201ENST00000565962 87 ntBASIC3.57□□□□□ -1.84
TRAV27A0A087WT01 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.57□□□□□ -1.84
TRAV27A0A087WT01 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.57□□□□□ -1.84
TRAV27A0A087WT01 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC3.57□□□□□ -1.84
TRAV27A0A087WT01 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.57□□□□□ -1.84
TRAV27A0A087WT01 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC3.57□□□□□ -1.84
TRAV27A0A087WT01 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.57□□□□□ -1.84
TRAV27A0A087WT01 AC015908.5-201ENST00000623289 343 ntBASIC3.57□□□□□ -1.84
TRAV27A0A087WT01 AC016542.2-201ENST00000624201 619 ntBASIC3.57□□□□□ -1.84
TRAV27A0A087WT01 BMS1P21-201ENST00000634565 365 ntBASIC3.57□□□□□ -1.84
TRAV27A0A087WT01 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
TRAV27A0A087WT01 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC3.57□□□□□ -1.84
TRAV27A0A087WT01 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC3.57□□□□□ -1.84
TRAV27A0A087WT01 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
TRAV27A0A087WT01 API5-210ENST00000534600 1760 ntTSL 5 BASIC3.56□□□□□ -1.84
TRAV27A0A087WT01 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
TRAV27A0A087WT01 ANKRD20A10P-201ENST00000457591 1515 ntBASIC3.56□□□□□ -1.84
TRAV27A0A087WT01 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC3.56□□□□□ -1.84
TRAV27A0A087WT01 AC073429.2-201ENST00000569694 1444 ntBASIC3.56□□□□□ -1.84
TRAV27A0A087WT01 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC3.56□□□□□ -1.84
TRAV27A0A087WT01 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
TRAV27A0A087WT01 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC3.56□□□□□ -1.84
TRAV27A0A087WT01 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
TRAV27A0A087WT01 RNU1-89P-201ENST00000384592 164 ntBASIC3.56□□□□□ -1.84
TRAV27A0A087WT01 RNU6-178P-201ENST00000384631 104 ntBASIC3.56□□□□□ -1.84
TRAV27A0A087WT01 OR6C69P-201ENST00000394268 893 ntBASIC3.56□□□□□ -1.84
TRAV27A0A087WT01 AC106901.1-201ENST00000425086 698 ntBASIC3.56□□□□□ -1.84
TRAV27A0A087WT01 MRPL50P1-201ENST00000431951 384 ntBASIC3.56□□□□□ -1.84
TRAV27A0A087WT01 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC3.56□□□□□ -1.84
TRAV27A0A087WT01 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.56□□□□□ -1.84
TRAV27A0A087WT01 ATP5HP2-201ENST00000433885 485 ntBASIC3.56□□□□□ -1.84
TRAV27A0A087WT01 TBCAP1-201ENST00000436520 327 ntBASIC3.56□□□□□ -1.84
TRAV27A0A087WT01 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
TRAV27A0A087WT01 AC083863.1-201ENST00000438811 231 ntBASIC3.56□□□□□ -1.84
TRAV27A0A087WT01 AL357520.1-201ENST00000441557 453 ntBASIC3.56□□□□□ -1.84
TRAV27A0A087WT01 HMGB1P16-201ENST00000447155 540 ntBASIC3.56□□□□□ -1.84
TRAV27A0A087WT01 AL500522.2-201ENST00000448562 343 ntBASIC3.56□□□□□ -1.84
TRAV27A0A087WT01 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC3.56□□□□□ -1.84
TRAV27A0A087WT01 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.56□□□□□ -1.84
TRAV27A0A087WT01 AL133477.1-201ENST00000457472 514 ntBASIC3.56□□□□□ -1.84
TRAV27A0A087WT01 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC3.56□□□□□ -1.84
TRAV27A0A087WT01 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
TRAV27A0A087WT01 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC3.56□□□□□ -1.84
TRAV27A0A087WT01 NDUFB4P12-201ENST00000513465 390 ntBASIC3.56□□□□□ -1.84
TRAV27A0A087WT01 RNA5SP143-201ENST00000516936 115 ntBASIC3.56□□□□□ -1.84
TRAV27A0A087WT01 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC3.56□□□□□ -1.84
TRAV27A0A087WT01 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC3.56□□□□□ -1.84
TRAV27A0A087WT01 AP003730.1-201ENST00000524605 285 ntBASIC3.56□□□□□ -1.84
TRAV27A0A087WT01 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC3.56□□□□□ -1.84
TRAV27A0A087WT01 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC3.56□□□□□ -1.84
TRAV27A0A087WT01 CR383656.6-201ENST00000550518 394 ntBASIC3.56□□□□□ -1.84
TRAV27A0A087WT01 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC3.56□□□□□ -1.84
TRAV27A0A087WT01 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC3.56□□□□□ -1.84
TRAV27A0A087WT01 AC090312.1-201ENST00000580637 348 ntBASIC3.56□□□□□ -1.84
TRAV27A0A087WT01 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC3.56□□□□□ -1.84
TRAV27A0A087WT01 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC3.56□□□□□ -1.84
TRAV27A0A087WT01 AC011477.5-201ENST00000586571 259 ntBASIC3.56□□□□□ -1.84
TRAV27A0A087WT01 AC068790.5-201ENST00000602741 355 ntBASIC3.56□□□□□ -1.84
TRAV27A0A087WT01 AL445567.2-201ENST00000618935 498 ntBASIC3.56□□□□□ -1.84
TRAV27A0A087WT01 AL359715.5-201ENST00000623431 443 ntBASIC3.56□□□□□ -1.84
TRAV27A0A087WT01 CARF-208ENST00000428585 2513 ntTSL 2 BASIC3.56□□□□□ -1.84
TRAV27A0A087WT01 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms