| CNTNAP2 | Q9UHC6 | AC093840.1-201 | ENST00000511599 | 336 nt | BASIC | 5.01 | □□□□□ -1.61 | | |
| CNTNAP2 | Q9UHC6 | AC093297.1-201 | ENST00000511712 | 591 nt | TSL 4 BASIC | 5.01 | □□□□□ -1.61 | | |
| CNTNAP2 | Q9UHC6 | AC008700.1-201 | ENST00000512571 | 654 nt | TSL 3 BASIC | 5.01 | □□□□□ -1.61 | | |
| CNTNAP2 | Q9UHC6 | SPINK13-203 | ENST00000512953 | 1022 nt | APPRIS P2 TSL 2 BASIC | 5.01 | □□□□□ -1.61 | | |
| CNTNAP2 | Q9UHC6 | AC138938.1-201 | ENST00000515431 | 782 nt | BASIC | 5.01 | □□□□□ -1.61 | | |
| CNTNAP2 | Q9UHC6 | Y_RNA.688-201 | ENST00000516565 | 95 nt | BASIC | 5.01 | □□□□□ -1.61 | | |
| CNTNAP2 | Q9UHC6 | RNU5A-4P-201 | ENST00000516588 | 111 nt | BASIC | 5.01 | □□□□□ -1.61 | | |
| CNTNAP2 | Q9UHC6 | AC021242.2-201 | ENST00000522765 | 454 nt | TSL 3 BASIC | 5.01 | □□□□□ -1.61 | | |
| CNTNAP2 | Q9UHC6 | AF117829.1-210 | ENST00000523859 | 696 nt | TSL 3 BASIC | 5.01 | □□□□□ -1.61 | | |
| CNTNAP2 | Q9UHC6 | AC007834.2-201 | ENST00000536310 | 343 nt | BASIC | 5.01 | □□□□□ -1.61 | | |
| CNTNAP2 | Q9UHC6 | AC079148.1-201 | ENST00000565944 | 819 nt | BASIC | 5.01 | □□□□□ -1.61 | | |
| CNTNAP2 | Q9UHC6 | AC023824.3-201 | ENST00000569003 | 562 nt | BASIC | 5.01 | □□□□□ -1.61 | | |
| CNTNAP2 | Q9UHC6 | AC234772.3-201 | ENST00000602277 | 528 nt | BASIC | 5.01 | □□□□□ -1.61 | | |
| CNTNAP2 | Q9UHC6 | AC138473.1-201 | ENST00000605717 | 526 nt | BASIC | 5.01 | □□□□□ -1.61 | | |
| CNTNAP2 | Q9UHC6 | AL590426.2-201 | ENST00000607287 | 786 nt | TSL 3 BASIC | 5.01 | □□□□□ -1.61 | | |
| CNTNAP2 | Q9UHC6 | RDM1-215 | ENST00000612980 | 501 nt | TSL 1 (best) BASIC | 5.01 | □□□□□ -1.61 | | |
| CNTNAP2 | Q9UHC6 | AL121873.1-201 | ENST00000616013 | 524 nt | BASIC | 5.01 | □□□□□ -1.61 | | |
| CNTNAP2 | Q9UHC6 | OR10A6-202 | ENST00000623991 | 945 nt | APPRIS P1 BASIC | 5.01 | □□□□□ -1.61 | | |
| CNTNAP2 | Q9UHC6 | OR1S2-202 | ENST00000641683 | 941 nt | APPRIS P1 BASIC | 5.01 | □□□□□ -1.61 | | |
| CNTNAP2 | Q9UHC6 | MFSD8-242 | ENST00000641690 | 4199 nt | BASIC | 5.01 | □□□□□ -1.61 | | |
| CNTNAP2 | Q9UHC6 | CSPP1-203 | ENST00000519668 | 3715 nt | APPRIS ALT2 TSL 1 (best) BASIC | 5.01 | □□□□□ -1.61 | | |
| CNTNAP2 | Q9UHC6 | EVI2A-202 | ENST00000461237 | 1540 nt | APPRIS ALT2 TSL 4 BASIC | 5.01 | □□□□□ -1.61 | | |
| CNTNAP2 | Q9UHC6 | ZC3H14-215 | ENST00000555900 | 1762 nt | TSL 5 BASIC | 5.01 | □□□□□ -1.61 | | |
| CNTNAP2 | Q9UHC6 | TRGC1-201 | ENST00000443402 | 2730 nt | APPRIS P1 BASIC | 5.01 | □□□□□ -1.61 | | |
| CNTNAP2 | Q9UHC6 | PPEF1-202 | ENST00000361511 | 2890 nt | APPRIS P1 TSL 1 (best) BASIC | 5.01 | □□□□□ -1.61 | | |
| CNTNAP2 | Q9UHC6 | BACH1-202 | ENST00000399921 | 5769 nt | APPRIS P1 TSL 1 (best) BASIC | 5.01 | □□□□□ -1.61 | | |
| CNTNAP2 | Q9UHC6 | PTPRO-203 | ENST00000442921 | 3030 nt | APPRIS ALT2 TSL 1 (best) BASIC | 5.01 | □□□□□ -1.61 | | |
| CNTNAP2 | Q9UHC6 | SCN3A-202 | ENST00000360093 | 9123 nt | APPRIS ALT1 TSL 5 BASIC | 5.01 | □□□□□ -1.61 | | |
| CNTNAP2 | Q9UHC6 | GRIK2-204 | ENST00000369137 | 4272 nt | TSL 5 BASIC | 5.01 | □□□□□ -1.61 | | |
| CNTNAP2 | Q9UHC6 | EYA1-205 | ENST00000388742 | 3907 nt | APPRIS P3 TSL 1 (best) BASIC | 5.01 | □□□□□ -1.61 | | |
| CNTNAP2 | Q9UHC6 | SGIP1-204 | ENST00000371039 | 4080 nt | APPRIS ALT2 TSL 1 (best) BASIC | 5.01 | □□□□□ -1.61 | | |
| CNTNAP2 | Q9UHC6 | SLCO1A2-201 | ENST00000307378 | 7682 nt | APPRIS P1 TSL 1 (best) BASIC | 5.01 | □□□□□ -1.61 | | |
| CNTNAP2 | Q9UHC6 | UBE3A-203 | ENST00000428984 | 2986 nt | APPRIS P3 TSL 5 BASIC | 5.01 | □□□□□ -1.61 | | |
| CNTNAP2 | Q9UHC6 | AC104260.2-201 | ENST00000623551 | 3497 nt | BASIC | 5.01 | □□□□□ -1.61 | | |
| CNTNAP2 | Q9UHC6 | LINC01289-201 | ENST00000519550 | 3712 nt | TSL 1 (best) BASIC | 5.01 | □□□□□ -1.61 | | |
| CNTNAP2 | Q9UHC6 | ERC2-201 | ENST00000288221 | 6138 nt | APPRIS P1 TSL 1 (best) BASIC | 5.01 | □□□□□ -1.61 | | |
| CNTNAP2 | Q9UHC6 | CENPI-201 | ENST00000372926 | 2375 nt | APPRIS ALT2 TSL 5 BASIC | 5.01 | □□□□□ -1.61 | | |
| CNTNAP2 | Q9UHC6 | AL391684.1-202 | ENST00000641293 | 1636 nt | BASIC | 5.01 | □□□□□ -1.61 | | |
| CNTNAP2 | Q9UHC6 | ESRRG-202 | ENST00000360012 | 5431 nt | APPRIS P1 TSL 1 (best) BASIC | 5 | □□□□□ -1.61 | | |
| CNTNAP2 | Q9UHC6 | EPHA7-202 | ENST00000369303 | 6588 nt | APPRIS P1 TSL 1 (best) BASIC | 5 | □□□□□ -1.61 | | |
| CNTNAP2 | Q9UHC6 | KLRC2-201 | ENST00000381901 | 1211 nt | APPRIS ALT2 TSL 5 BASIC | 5 | □□□□□ -1.61 | | |
| CNTNAP2 | Q9UHC6 | KLRC2-202 | ENST00000381902 | 1221 nt | APPRIS P2 TSL 1 (best) BASIC | 5 | □□□□□ -1.61 | | |
| CNTNAP2 | Q9UHC6 | AL138880.1-201 | ENST00000405824 | 642 nt | BASIC | 5 | □□□□□ -1.61 | | |
| CNTNAP2 | Q9UHC6 | PTGES3P2-201 | ENST00000407942 | 482 nt | BASIC | 5 | □□□□□ -1.61 | | |
| CNTNAP2 | Q9UHC6 | AL732292.1-201 | ENST00000426692 | 226 nt | BASIC | 5 | □□□□□ -1.61 | | |
| CNTNAP2 | Q9UHC6 | AL451070.1-201 | ENST00000430143 | 439 nt | TSL 5 BASIC | 5 | □□□□□ -1.61 | | |
| CNTNAP2 | Q9UHC6 | AC008568.1-203 | ENST00000433406 | 765 nt | TSL 3 BASIC | 5 | □□□□□ -1.61 | | |
| CNTNAP2 | Q9UHC6 | AC015971.1-202 | ENST00000439077 | 514 nt | TSL 3 BASIC | 5 | □□□□□ -1.61 | | |
| CNTNAP2 | Q9UHC6 | AL360013.2-201 | ENST00000440104 | 807 nt | TSL 2 BASIC | 5 | □□□□□ -1.61 | | |
| CNTNAP2 | Q9UHC6 | ZNF736P5Y-201 | ENST00000451173 | 805 nt | BASIC | 5 | □□□□□ -1.61 | | |
| CNTNAP2 | Q9UHC6 | ATP5A1P7-201 | ENST00000453978 | 1279 nt | BASIC | 5 | □□□□□ -1.61 | | |
| CNTNAP2 | Q9UHC6 | AL591473.1-201 | ENST00000464297 | 313 nt | BASIC | 5 | □□□□□ -1.61 | | |
| CNTNAP2 | Q9UHC6 | PRDX3P4-201 | ENST00000470828 | 747 nt | BASIC | 5 | □□□□□ -1.61 | | |
| CNTNAP2 | Q9UHC6 | NIP7P2-201 | ENST00000485801 | 544 nt | BASIC | 5 | □□□□□ -1.61 | | |
| CNTNAP2 | Q9UHC6 | STK26-205 | ENST00000496850 | 1186 nt | TSL 1 (best) BASIC | 5 | □□□□□ -1.61 | | |
| CNTNAP2 | Q9UHC6 | AC124242.1-202 | ENST00000499554 | 1052 nt | TSL 3 BASIC | 5 | □□□□□ -1.61 | | |
| CNTNAP2 | Q9UHC6 | AC107401.1-201 | ENST00000503426 | 685 nt | BASIC | 5 | □□□□□ -1.61 | | |
| CNTNAP2 | Q9UHC6 | PRELID3BP6-201 | ENST00000503839 | 571 nt | BASIC | 5 | □□□□□ -1.61 | | |
| CNTNAP2 | Q9UHC6 | OR52Z1-201 | ENST00000510471 | 897 nt | APPRIS P1 BASIC | 5 | □□□□□ -1.61 | | |
| CNTNAP2 | Q9UHC6 | AC104012.1-201 | ENST00000517848 | 719 nt | TSL 3 BASIC | 5 | □□□□□ -1.61 | | |
| CNTNAP2 | Q9UHC6 | AC117834.1-202 | ENST00000521203 | 561 nt | TSL 4 BASIC | 5 | □□□□□ -1.61 | | |
| CNTNAP2 | Q9UHC6 | OR10D4P-201 | ENST00000525892 | 951 nt | BASIC | 5 | □□□□□ -1.61 | | |
| CNTNAP2 | Q9UHC6 | AC108471.2-204 | ENST00000526807 | 784 nt | TSL 5 BASIC | 5 | □□□□□ -1.61 | | |
| CNTNAP2 | Q9UHC6 | AP000827.1-201 | ENST00000527814 | 258 nt | BASIC | 5 | □□□□□ -1.61 | | |
| CNTNAP2 | Q9UHC6 | PTH-202 | ENST00000529816 | 799 nt | APPRIS P1 TSL 5 BASIC | 5 | □□□□□ -1.61 | | |
| CNTNAP2 | Q9UHC6 | TEX12-202 | ENST00000530752 | 787 nt | APPRIS P1 TSL 1 (best) BASIC | 5 | □□□□□ -1.61 | | |
| CNTNAP2 | Q9UHC6 | AP002518.2-201 | ENST00000544925 | 393 nt | TSL 5 BASIC | 5 | □□□□□ -1.61 | | |
| CNTNAP2 | Q9UHC6 | AL157938.2-205 | ENST00000586290 | 891 nt | TSL 5 BASIC | 5 | □□□□□ -1.61 | | |
| CNTNAP2 | Q9UHC6 | AC015911.5-201 | ENST00000587076 | 451 nt | BASIC | 5 | □□□□□ -1.61 | | |
| CNTNAP2 | Q9UHC6 | AC245036.5-201 | ENST00000596330 | 847 nt | BASIC | 5 | □□□□□ -1.61 | | |
| CNTNAP2 | Q9UHC6 | AC010620.1-201 | ENST00000601088 | 1102 nt | BASIC | 5 | □□□□□ -1.61 | | |
| CNTNAP2 | Q9UHC6 | BNIP3P30-201 | ENST00000601184 | 574 nt | BASIC | 5 | □□□□□ -1.61 | | |
| CNTNAP2 | Q9UHC6 | AL450336.1-201 | ENST00000605180 | 586 nt | BASIC | 5 | □□□□□ -1.61 | | |
| CNTNAP2 | Q9UHC6 | AC120053.1-201 | ENST00000607706 | 736 nt | BASIC | 5 | □□□□□ -1.61 | | |
| CNTNAP2 | Q9UHC6 | AL445423.1-201 | ENST00000609941 | 536 nt | BASIC | 5 | □□□□□ -1.61 | | |
| CNTNAP2 | Q9UHC6 | AC012409.3-201 | ENST00000611343 | 981 nt | BASIC | 5 | □□□□□ -1.61 | | |
| CNTNAP2 | Q9UHC6 | AC123768.3-201 | ENST00000613733 | 523 nt | TSL 3 BASIC | 5 | □□□□□ -1.61 | | |
| CNTNAP2 | Q9UHC6 | AC022106.2-201 | ENST00000620114 | 757 nt | BASIC | 5 | □□□□□ -1.61 | | |
| CNTNAP2 | Q9UHC6 | AC015871.5-202 | ENST00000623252 | 701 nt | BASIC | 5 | □□□□□ -1.61 | | |
| CNTNAP2 | Q9UHC6 | LINC02033-202 | ENST00000623312 | 492 nt | TSL 3 BASIC | 5 | □□□□□ -1.61 | | |
| CNTNAP2 | Q9UHC6 | AC005609.4-201 | ENST00000625071 | 447 nt | BASIC | 5 | □□□□□ -1.61 | | |
| CNTNAP2 | Q9UHC6 | TMEM30CP-203 | ENST00000637814 | 1035 nt | BASIC | 5 | □□□□□ -1.61 | | |
| CNTNAP2 | Q9UHC6 | OR8B3-202 | ENST00000641139 | 2170 nt | APPRIS P1 BASIC | 5 | □□□□□ -1.61 | | |
| CNTNAP2 | Q9UHC6 | ABCA12-201 | ENST00000272895 | 9100 nt | APPRIS P1 TSL 1 (best) BASIC | 5 | □□□□□ -1.61 | | |
| CNTNAP2 | Q9UHC6 | RABGAP1L-205 | ENST00000367687 | 1849 nt | TSL 2 BASIC | 5 | □□□□□ -1.61 | | |
| CNTNAP2 | Q9UHC6 | ERGIC2-212 | ENST00000611644 | 4961 nt | TSL 5 BASIC | 5 | □□□□□ -1.61 | | |
| CNTNAP2 | Q9UHC6 | AC093591.2-201 | ENST00000565254 | 3843 nt | BASIC | 5 | □□□□□ -1.61 | | |
| CNTNAP2 | Q9UHC6 | KIF21A-201 | ENST00000361418 | 5044 nt | APPRIS P1 TSL 1 (best) BASIC | 5 | □□□□□ -1.61 | | |
| CNTNAP2 | Q9UHC6 | TNRC6B-202 | ENST00000335727 | 17933 nt | TSL 1 (best) BASIC | 5 | □□□□□ -1.61 | | |
| CNTNAP2 | Q9UHC6 | HACD3-211 | ENST00000569894 | 1471 nt | TSL 5 BASIC | 5 | □□□□□ -1.61 | | |
| CNTNAP2 | Q9UHC6 | SYCP1-210 | ENST00000618516 | 3109 nt | APPRIS P1 TSL 1 (best) BASIC | 5 | □□□□□ -1.61 | | |
| CNTNAP2 | Q9UHC6 | AC107068.1-201 | ENST00000563286 | 4218 nt | BASIC | 5 | □□□□□ -1.61 | | |
| CNTNAP2 | Q9UHC6 | CENPI-204 | ENST00000423383 | 2314 nt | APPRIS P3 TSL 5 BASIC | 5 | □□□□□ -1.61 | | |
| CNTNAP2 | Q9UHC6 | PCDH15-211 | ENST00000395440 | 3177 nt | TSL 5 BASIC | 5 | □□□□□ -1.61 | | |
| CNTNAP2 | Q9UHC6 | TC2N-203 | ENST00000435962 | 5146 nt | APPRIS P1 TSL 2 BASIC | 5 | □□□□□ -1.61 | | |
| CNTNAP2 | Q9UHC6 | MTRNR2L7-201 | ENST00000544824 | 1535 nt | APPRIS P1 BASIC | 5 | □□□□□ -1.61 | | |
| CNTNAP2 | Q9UHC6 | ARHGAP42-201 | ENST00000298815 | 4752 nt | APPRIS P1 TSL 5 BASIC | 4.99 | □□□□□ -1.61 | | |
| CNTNAP2 | Q9UHC6 | OR56B2P-201 | ENST00000317102 | 954 nt | BASIC | 4.99 | □□□□□ -1.61 | | |
| CNTNAP2 | Q9UHC6 | OR2M7-201 | ENST00000317965 | 939 nt | APPRIS P1 BASIC | 4.99 | □□□□□ -1.61 | | |
| CNTNAP2 | Q9UHC6 | OR6C74-201 | ENST00000343870 | 1105 nt | APPRIS P1 BASIC | 4.99 | □□□□□ -1.61 | | |