Protein–RNA interactions for Protein: Q9UGP4

LIMD1, LIM domain-containing protein 1, humanhuman

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1Q9UGP4 RNA5SP318-201ENST00000516352 92 ntBASIC7.21□□□□□ -1.26
LIMD1Q9UGP4 RAD21-204ENST00000518055 896 ntTSL 2 BASIC7.21□□□□□ -1.26
LIMD1Q9UGP4 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
LIMD1Q9UGP4 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC7.21□□□□□ -1.26
LIMD1Q9UGP4 RPL21P12-201ENST00000559810 515 ntBASIC7.21□□□□□ -1.26
LIMD1Q9UGP4 AC026826.3-201ENST00000561747 158 ntBASIC7.21□□□□□ -1.26
LIMD1Q9UGP4 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC7.21□□□□□ -1.26
LIMD1Q9UGP4 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC7.21□□□□□ -1.26
LIMD1Q9UGP4 AC063977.7-201ENST00000594454 337 ntBASIC7.21□□□□□ -1.26
LIMD1Q9UGP4 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC7.21□□□□□ -1.26
LIMD1Q9UGP4 AC012175.1-201ENST00000603755 531 ntBASIC7.21□□□□□ -1.26
LIMD1Q9UGP4 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC7.21□□□□□ -1.26
LIMD1Q9UGP4 HSPE1P14-201ENST00000605812 302 ntBASIC7.21□□□□□ -1.26
LIMD1Q9UGP4 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC7.21□□□□□ -1.26
LIMD1Q9UGP4 AC004241.2-201ENST00000614562 444 ntBASIC7.21□□□□□ -1.26
LIMD1Q9UGP4 MIR6729-201ENST00000618194 65 ntBASIC7.21□□□□□ -1.26
LIMD1Q9UGP4 AL713922.2-201ENST00000619384 716 ntBASIC7.21□□□□□ -1.26
LIMD1Q9UGP4 AC015908.5-201ENST00000623289 343 ntBASIC7.21□□□□□ -1.26
LIMD1Q9UGP4 CTAGE11P-201ENST00000451540 2353 ntBASIC7.21□□□□□ -1.26
LIMD1Q9UGP4 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
LIMD1Q9UGP4 AP004289.2-201ENST00000444413 1457 ntBASIC7.21□□□□□ -1.26
LIMD1Q9UGP4 AC092821.3-202ENST00000641304 2767 ntBASIC7.21□□□□□ -1.26
LIMD1Q9UGP4 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
LIMD1Q9UGP4 INTS2-201ENST00000251334 4255 ntAPPRIS P1 TSL 2 BASIC7.21□□□□□ -1.26
LIMD1Q9UGP4 AL359922.3-201ENST00000624779 1670 ntBASIC7.21□□□□□ -1.26
LIMD1Q9UGP4 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
LIMD1Q9UGP4 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
LIMD1Q9UGP4 NT5C2-203ENST00000404739 3365 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
LIMD1Q9UGP4 SUPT7L-202ENST00000404798 4114 ntTSL 2 BASIC7.21□□□□□ -1.26
LIMD1Q9UGP4 AC092724.1-201ENST00000624623 3397 ntBASIC7.21□□□□□ -1.26
LIMD1Q9UGP4 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
LIMD1Q9UGP4 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
LIMD1Q9UGP4 OR7D2-201ENST00000344248 3224 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
LIMD1Q9UGP4 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC7.21□□□□□ -1.26
LIMD1Q9UGP4 CD36-221ENST00000534394 1741 ntTSL 2 BASIC7.21□□□□□ -1.26
LIMD1Q9UGP4 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC7.21□□□□□ -1.26
LIMD1Q9UGP4 BCL2L14-211ENST00000586576 1927 ntTSL 5 BASIC7.21□□□□□ -1.26
LIMD1Q9UGP4 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC7.21□□□□□ -1.26
LIMD1Q9UGP4 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
LIMD1Q9UGP4 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
LIMD1Q9UGP4 NACA-203ENST00000454682 6629 ntTSL 5 BASIC7.21□□□□□ -1.26
LIMD1Q9UGP4 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.26
LIMD1Q9UGP4 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
LIMD1Q9UGP4 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
LIMD1Q9UGP4 IL5RA-204ENST00000418488 5521 ntTSL 5 BASIC7.2□□□□□ -1.26
LIMD1Q9UGP4 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
LIMD1Q9UGP4 XPOTP1-201ENST00000443317 2398 ntBASIC7.2□□□□□ -1.26
LIMD1Q9UGP4 BCO2-203ENST00000438022 2598 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
LIMD1Q9UGP4 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
LIMD1Q9UGP4 RMST-210ENST00000640149 2844 ntTSL 5 BASIC7.2□□□□□ -1.26
LIMD1Q9UGP4 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
LIMD1Q9UGP4 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
LIMD1Q9UGP4 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC7.2□□□□□ -1.26
LIMD1Q9UGP4 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
LIMD1Q9UGP4 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
LIMD1Q9UGP4 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
LIMD1Q9UGP4 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
LIMD1Q9UGP4 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
LIMD1Q9UGP4 TINAG-203ENST00000370869 782 ntTSL 3 BASIC7.2□□□□□ -1.26
LIMD1Q9UGP4 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
LIMD1Q9UGP4 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
LIMD1Q9UGP4 AL024474.1-201ENST00000404655 591 ntBASIC7.2□□□□□ -1.26
LIMD1Q9UGP4 AL161631.1-201ENST00000417933 486 ntBASIC7.2□□□□□ -1.26
LIMD1Q9UGP4 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
LIMD1Q9UGP4 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC7.2□□□□□ -1.26
LIMD1Q9UGP4 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC7.2□□□□□ -1.26
LIMD1Q9UGP4 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC7.2□□□□□ -1.26
LIMD1Q9UGP4 AC108734.1-201ENST00000439549 399 ntBASIC7.2□□□□□ -1.26
LIMD1Q9UGP4 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC7.2□□□□□ -1.26
LIMD1Q9UGP4 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC7.2□□□□□ -1.26
LIMD1Q9UGP4 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC7.2□□□□□ -1.26
LIMD1Q9UGP4 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC7.2□□□□□ -1.26
LIMD1Q9UGP4 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC7.2□□□□□ -1.26
LIMD1Q9UGP4 AC012181.1-201ENST00000479895 423 ntBASIC7.2□□□□□ -1.26
LIMD1Q9UGP4 RPL21P99-201ENST00000480369 423 ntBASIC7.2□□□□□ -1.26
LIMD1Q9UGP4 AC113367.2-201ENST00000505749 160 ntBASIC7.2□□□□□ -1.26
LIMD1Q9UGP4 AC091965.3-201ENST00000506236 208 ntBASIC7.2□□□□□ -1.26
LIMD1Q9UGP4 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC7.2□□□□□ -1.26
LIMD1Q9UGP4 FAM206BP-201ENST00000510179 541 ntBASIC7.2□□□□□ -1.26
LIMD1Q9UGP4 AC018797.1-201ENST00000510791 255 ntBASIC7.2□□□□□ -1.26
LIMD1Q9UGP4 TTC39CP1-201ENST00000512513 755 ntBASIC7.2□□□□□ -1.26
LIMD1Q9UGP4 RNU6-1046P-201ENST00000516538 107 ntBASIC7.2□□□□□ -1.26
LIMD1Q9UGP4 IGHV7-34-1-201ENST00000519200 350 ntBASIC7.2□□□□□ -1.26
LIMD1Q9UGP4 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC7.2□□□□□ -1.26
LIMD1Q9UGP4 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC7.2□□□□□ -1.26
LIMD1Q9UGP4 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC7.2□□□□□ -1.26
LIMD1Q9UGP4 AC010605.1-201ENST00000597303 797 ntTSL 2 BASIC7.2□□□□□ -1.26
LIMD1Q9UGP4 AL355816.1-201ENST00000607951 118 ntBASIC7.2□□□□□ -1.26
LIMD1Q9UGP4 OR6R2P-201ENST00000609216 300 ntBASIC7.2□□□□□ -1.26
LIMD1Q9UGP4 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC7.2□□□□□ -1.26
LIMD1Q9UGP4 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC7.2□□□□□ -1.26
LIMD1Q9UGP4 uc_338.12-201ENST00000616344 181 ntBASIC7.2□□□□□ -1.26
LIMD1Q9UGP4 AC079597.1-201ENST00000624306 508 ntBASIC7.2□□□□□ -1.26
LIMD1Q9UGP4 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC7.2□□□□□ -1.26
LIMD1Q9UGP4 AC091806.1-201ENST00000452690 3000 ntTSL 2 BASIC7.2□□□□□ -1.26
LIMD1Q9UGP4 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC7.2□□□□□ -1.26
LIMD1Q9UGP4 TRIM49-201ENST00000329758 2163 ntAPPRIS P2 TSL 1 (best) BASIC7.2□□□□□ -1.26
LIMD1Q9UGP4 TRIM49C-201ENST00000448984 2163 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
LIMD1Q9UGP4 CPB2-AS1-202ENST00000606243 2185 ntTSL 2 BASIC7.2□□□□□ -1.26
LIMD1Q9UGP4 TRIM49B-202ENST00000622138 2162 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms