Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 WDR78-207ENST00000488333 613 ntTSL 3 BASIC5.3□□□□□ -1.56
HDAC6Q9UBN7 AC020890.1-201ENST00000491837 504 ntBASIC5.3□□□□□ -1.56
HDAC6Q9UBN7 RN7SL558P-201ENST00000497468 299 ntBASIC5.3□□□□□ -1.56
HDAC6Q9UBN7 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC5.3□□□□□ -1.56
HDAC6Q9UBN7 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC5.3□□□□□ -1.56
HDAC6Q9UBN7 RNU1-6P-201ENST00000516290 144 ntBASIC5.3□□□□□ -1.56
HDAC6Q9UBN7 RNU6-1308P-201ENST00000516817 103 ntBASIC5.3□□□□□ -1.56
HDAC6Q9UBN7 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC5.3□□□□□ -1.56
HDAC6Q9UBN7 OR7E13P-201ENST00000526052 910 ntBASIC5.3□□□□□ -1.56
HDAC6Q9UBN7 AP003717.3-201ENST00000544832 1180 ntBASIC5.3□□□□□ -1.56
HDAC6Q9UBN7 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC5.3□□□□□ -1.56
HDAC6Q9UBN7 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC5.3□□□□□ -1.56
HDAC6Q9UBN7 RN7SL652P-201ENST00000577769 300 ntBASIC5.3□□□□□ -1.56
HDAC6Q9UBN7 AC090666.1-201ENST00000578241 445 ntBASIC5.3□□□□□ -1.56
HDAC6Q9UBN7 AP005119.2-201ENST00000579735 1105 ntBASIC5.3□□□□□ -1.56
HDAC6Q9UBN7 SS18L2P2-201ENST00000583960 235 ntBASIC5.3□□□□□ -1.56
HDAC6Q9UBN7 AC011492.1-201ENST00000600023 315 ntBASIC5.3□□□□□ -1.56
HDAC6Q9UBN7 AC018618.2-201ENST00000604770 446 ntBASIC5.3□□□□□ -1.56
HDAC6Q9UBN7 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HDAC6Q9UBN7 RMST_10.1-201ENST00000616309 154 ntBASIC5.3□□□□□ -1.56
HDAC6Q9UBN7 AL669942.2-201ENST00000620352 697 ntBASIC5.3□□□□□ -1.56
HDAC6Q9UBN7 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC5.3□□□□□ -1.56
HDAC6Q9UBN7 AC119674.1-212ENST00000641155 993 ntBASIC5.3□□□□□ -1.56
HDAC6Q9UBN7 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HDAC6Q9UBN7 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.3□□□□□ -1.56
HDAC6Q9UBN7 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HDAC6Q9UBN7 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HDAC6Q9UBN7 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HDAC6Q9UBN7 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HDAC6Q9UBN7 SMG1P6-201ENST00000532337 2930 ntBASIC5.3□□□□□ -1.56
HDAC6Q9UBN7 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.3□□□□□ -1.56
HDAC6Q9UBN7 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HDAC6Q9UBN7 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HDAC6Q9UBN7 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.29□□□□□ -1.56
HDAC6Q9UBN7 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
HDAC6Q9UBN7 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HDAC6Q9UBN7 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC5.29□□□□□ -1.56
HDAC6Q9UBN7 AL627171.1-201ENST00000618845 1308 ntBASIC5.29□□□□□ -1.56
HDAC6Q9UBN7 RNA5SP447-201ENST00000363749 119 ntBASIC5.29□□□□□ -1.56
HDAC6Q9UBN7 RNU6-481P-201ENST00000384194 107 ntBASIC5.29□□□□□ -1.56
HDAC6Q9UBN7 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HDAC6Q9UBN7 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC5.29□□□□□ -1.56
HDAC6Q9UBN7 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC5.29□□□□□ -1.56
HDAC6Q9UBN7 AL592293.2-201ENST00000422292 996 ntBASIC5.29□□□□□ -1.56
HDAC6Q9UBN7 EIF4HP2-201ENST00000424380 563 ntBASIC5.29□□□□□ -1.56
HDAC6Q9UBN7 DEFB130D-201ENST00000426866 237 ntBASIC5.29□□□□□ -1.56
HDAC6Q9UBN7 RSL24D1P6-201ENST00000426934 401 ntBASIC5.29□□□□□ -1.56
HDAC6Q9UBN7 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.29□□□□□ -1.56
HDAC6Q9UBN7 RPL12P28-201ENST00000430852 489 ntBASIC5.29□□□□□ -1.56
HDAC6Q9UBN7 FABP5P3-201ENST00000437960 408 ntBASIC5.29□□□□□ -1.56
HDAC6Q9UBN7 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC5.29□□□□□ -1.56
HDAC6Q9UBN7 YWHAZP2-201ENST00000440317 728 ntBASIC5.29□□□□□ -1.56
HDAC6Q9UBN7 EIF2S2P2-201ENST00000447161 982 ntBASIC5.29□□□□□ -1.56
HDAC6Q9UBN7 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC5.29□□□□□ -1.56
HDAC6Q9UBN7 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC5.29□□□□□ -1.56
HDAC6Q9UBN7 AL445433.1-201ENST00000457507 257 ntBASIC5.29□□□□□ -1.56
HDAC6Q9UBN7 RPS20P4-201ENST00000461659 355 ntBASIC5.29□□□□□ -1.56
HDAC6Q9UBN7 AC108751.2-201ENST00000469993 231 ntBASIC5.29□□□□□ -1.56
HDAC6Q9UBN7 AC104982.1-201ENST00000478775 574 ntBASIC5.29□□□□□ -1.56
HDAC6Q9UBN7 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC5.29□□□□□ -1.56
HDAC6Q9UBN7 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC5.29□□□□□ -1.56
HDAC6Q9UBN7 AC118282.1-201ENST00000506408 765 ntBASIC5.29□□□□□ -1.56
HDAC6Q9UBN7 AC010460.2-201ENST00000509054 677 ntBASIC5.29□□□□□ -1.56
HDAC6Q9UBN7 RNA5SP360-201ENST00000516555 118 ntBASIC5.29□□□□□ -1.56
HDAC6Q9UBN7 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC5.29□□□□□ -1.56
HDAC6Q9UBN7 AC093249.4-201ENST00000564755 259 ntBASIC5.29□□□□□ -1.56
HDAC6Q9UBN7 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC5.29□□□□□ -1.56
HDAC6Q9UBN7 MIR4675-201ENST00000577898 77 ntBASIC5.29□□□□□ -1.56
HDAC6Q9UBN7 AL590392.1-201ENST00000604960 446 ntBASIC5.29□□□□□ -1.56
HDAC6Q9UBN7 AL356218.2-201ENST00000605264 187 ntBASIC5.29□□□□□ -1.56
HDAC6Q9UBN7 AC112503.1-201ENST00000608436 391 ntBASIC5.29□□□□□ -1.56
HDAC6Q9UBN7 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.29□□□□□ -1.56
HDAC6Q9UBN7 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC5.29□□□□□ -1.56
HDAC6Q9UBN7 AC068787.1-201ENST00000623908 691 ntBASIC5.29□□□□□ -1.56
HDAC6Q9UBN7 AC132825.7-201ENST00000638744 335 ntBASIC5.29□□□□□ -1.56
HDAC6Q9UBN7 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
HDAC6Q9UBN7 OR51H2P-202ENST00000641424 3046 ntBASIC5.29□□□□□ -1.56
HDAC6Q9UBN7 AL592148.3-201ENST00000608771 2646 ntBASIC5.29□□□□□ -1.56
HDAC6Q9UBN7 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HDAC6Q9UBN7 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
HDAC6Q9UBN7 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.29□□□□□ -1.56
HDAC6Q9UBN7 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
HDAC6Q9UBN7 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HDAC6Q9UBN7 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HDAC6Q9UBN7 AC093775.1-201ENST00000624154 1868 ntBASIC5.28□□□□□ -1.56
HDAC6Q9UBN7 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
HDAC6Q9UBN7 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
HDAC6Q9UBN7 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.28□□□□□ -1.56
HDAC6Q9UBN7 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
HDAC6Q9UBN7 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
HDAC6Q9UBN7 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
HDAC6Q9UBN7 RNU6-207P-201ENST00000384137 107 ntBASIC5.28□□□□□ -1.56
HDAC6Q9UBN7 SNORA68.2-201ENST00000391263 128 ntBASIC5.28□□□□□ -1.56
HDAC6Q9UBN7 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC5.28□□□□□ -1.56
HDAC6Q9UBN7 AL049693.1-201ENST00000402760 611 ntBASIC5.28□□□□□ -1.56
HDAC6Q9UBN7 SNORA11-201ENST00000408789 128 ntBASIC5.28□□□□□ -1.56
HDAC6Q9UBN7 AC096533.1-201ENST00000411645 353 ntBASIC5.28□□□□□ -1.56
HDAC6Q9UBN7 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC5.28□□□□□ -1.56
HDAC6Q9UBN7 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5.28□□□□□ -1.56
HDAC6Q9UBN7 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms