Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 AP004609.2-201ENST00000532177 190 ntBASIC6.61□□□□□ -1.35
CNTN3Q9P232 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC6.61□□□□□ -1.35
CNTN3Q9P232 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC6.61□□□□□ -1.35
CNTN3Q9P232 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CNTN3Q9P232 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC6.61□□□□□ -1.35
CNTN3Q9P232 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC6.61□□□□□ -1.35
CNTN3Q9P232 RNU4ATAC-201ENST00000580972 127 ntBASIC6.61□□□□□ -1.35
CNTN3Q9P232 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC6.61□□□□□ -1.35
CNTN3Q9P232 AC090236.2-201ENST00000587933 1101 ntBASIC6.61□□□□□ -1.35
CNTN3Q9P232 BNIP3P23-201ENST00000599655 511 ntBASIC6.61□□□□□ -1.35
CNTN3Q9P232 AC073091.2-201ENST00000603205 907 ntBASIC6.61□□□□□ -1.35
CNTN3Q9P232 MIR7973-1-201ENST00000614683 76 ntBASIC6.61□□□□□ -1.35
CNTN3Q9P232 PISRT1-201ENST00000626175 531 ntBASIC6.61□□□□□ -1.35
CNTN3Q9P232 TEX41-254ENST00000626394 423 ntTSL 5 BASIC6.61□□□□□ -1.35
CNTN3Q9P232 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CNTN3Q9P232 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
CNTN3Q9P232 LCOR-201ENST00000286067 4542 ntBASIC6.61□□□□□ -1.35
CNTN3Q9P232 HSPD1P8-201ENST00000400121 1658 ntBASIC6.61□□□□□ -1.35
CNTN3Q9P232 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CNTN3Q9P232 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC6.61□□□□□ -1.35
CNTN3Q9P232 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC6.61□□□□□ -1.35
CNTN3Q9P232 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CNTN3Q9P232 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CNTN3Q9P232 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
CNTN3Q9P232 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
CNTN3Q9P232 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
CNTN3Q9P232 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
CNTN3Q9P232 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC6.6□□□□□ -1.35
CNTN3Q9P232 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CNTN3Q9P232 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CNTN3Q9P232 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
CNTN3Q9P232 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CNTN3Q9P232 HSPA8P17-201ENST00000427029 1382 ntBASIC6.6□□□□□ -1.35
CNTN3Q9P232 AC079097.1-201ENST00000512187 1399 ntBASIC6.6□□□□□ -1.35
CNTN3Q9P232 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC6.6□□□□□ -1.35
CNTN3Q9P232 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC6.6□□□□□ -1.35
CNTN3Q9P232 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC6.6□□□□□ -1.35
CNTN3Q9P232 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CNTN3Q9P232 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
CNTN3Q9P232 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
CNTN3Q9P232 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
CNTN3Q9P232 Y_RNA.1-201ENST00000352915 104 ntBASIC6.6□□□□□ -1.35
CNTN3Q9P232 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
CNTN3Q9P232 Y_RNA.279-201ENST00000364763 95 ntBASIC6.6□□□□□ -1.35
CNTN3Q9P232 SNORA70.9-201ENST00000384370 135 ntBASIC6.6□□□□□ -1.35
CNTN3Q9P232 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
CNTN3Q9P232 AL450338.1-201ENST00000407987 512 ntBASIC6.6□□□□□ -1.35
CNTN3Q9P232 Y_RNA.608-201ENST00000410647 95 ntBASIC6.6□□□□□ -1.35
CNTN3Q9P232 AL136133.1-201ENST00000413694 376 ntBASIC6.6□□□□□ -1.35
CNTN3Q9P232 BX295541.1-201ENST00000417774 250 ntBASIC6.6□□□□□ -1.35
CNTN3Q9P232 RPS15AP30-201ENST00000420976 390 ntBASIC6.6□□□□□ -1.35
CNTN3Q9P232 AL513174.1-201ENST00000423182 629 ntBASIC6.6□□□□□ -1.35
CNTN3Q9P232 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC6.6□□□□□ -1.35
CNTN3Q9P232 RPL12P12-201ENST00000424633 501 ntBASIC6.6□□□□□ -1.35
CNTN3Q9P232 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC6.6□□□□□ -1.35
CNTN3Q9P232 AL358934.1-201ENST00000432346 324 ntBASIC6.6□□□□□ -1.35
CNTN3Q9P232 AC009961.2-201ENST00000435771 251 ntBASIC6.6□□□□□ -1.35
CNTN3Q9P232 AC005077.1-201ENST00000449226 375 ntBASIC6.6□□□□□ -1.35
CNTN3Q9P232 RGS5-217ENST00000451759 835 ntTSL 3 BASIC6.6□□□□□ -1.35
CNTN3Q9P232 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC6.6□□□□□ -1.35
CNTN3Q9P232 AL355032.1-201ENST00000472981 438 ntBASIC6.6□□□□□ -1.35
CNTN3Q9P232 HMGN1P10-201ENST00000474557 553 ntBASIC6.6□□□□□ -1.35
CNTN3Q9P232 AOX3P-204ENST00000491025 2107 ntBASIC6.6□□□□□ -1.35
CNTN3Q9P232 AC117522.3-201ENST00000507974 584 ntBASIC6.6□□□□□ -1.35
CNTN3Q9P232 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC6.6□□□□□ -1.35
CNTN3Q9P232 IMPA1P1-201ENST00000510718 842 ntBASIC6.6□□□□□ -1.35
CNTN3Q9P232 Y_RNA.701-201ENST00000516812 110 ntBASIC6.6□□□□□ -1.35
CNTN3Q9P232 AC060775.1-201ENST00000518241 520 ntBASIC6.6□□□□□ -1.35
CNTN3Q9P232 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC6.6□□□□□ -1.35
CNTN3Q9P232 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC6.6□□□□□ -1.35
CNTN3Q9P232 AP003396.4-201ENST00000527574 265 ntBASIC6.6□□□□□ -1.35
CNTN3Q9P232 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC6.6□□□□□ -1.35
CNTN3Q9P232 NANOGNBP2-201ENST00000544753 553 ntBASIC6.6□□□□□ -1.35
CNTN3Q9P232 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC6.6□□□□□ -1.35
CNTN3Q9P232 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC6.6□□□□□ -1.35
CNTN3Q9P232 RPL21P5-201ENST00000554662 472 ntBASIC6.6□□□□□ -1.35
CNTN3Q9P232 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC6.6□□□□□ -1.35
CNTN3Q9P232 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC6.6□□□□□ -1.35
CNTN3Q9P232 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC6.6□□□□□ -1.35
CNTN3Q9P232 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC6.6□□□□□ -1.35
CNTN3Q9P232 RPL12P48-201ENST00000605620 304 ntBASIC6.6□□□□□ -1.35
CNTN3Q9P232 AC018695.5-201ENST00000605872 315 ntBASIC6.6□□□□□ -1.35
CNTN3Q9P232 AC096861.1-201ENST00000616652 240 ntBASIC6.6□□□□□ -1.35
CNTN3Q9P232 AC104010.1-201ENST00000616889 150 ntBASIC6.6□□□□□ -1.35
CNTN3Q9P232 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC6.6□□□□□ -1.35
CNTN3Q9P232 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CNTN3Q9P232 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC6.6□□□□□ -1.35
CNTN3Q9P232 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC6.6□□□□□ -1.35
CNTN3Q9P232 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC6.6□□□□□ -1.35
CNTN3Q9P232 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC6.6□□□□□ -1.35
CNTN3Q9P232 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC6.6□□□□□ -1.35
CNTN3Q9P232 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CNTN3Q9P232 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CNTN3Q9P232 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC6.6□□□□□ -1.35
CNTN3Q9P232 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC6.6□□□□□ -1.35
CNTN3Q9P232 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC6.6□□□□□ -1.35
CNTN3Q9P232 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.59□□□□□ -1.35
CNTN3Q9P232 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC6.59□□□□□ -1.35
CNTN3Q9P232 OR4G11P-202ENST00000642116 1414 ntBASIC6.59□□□□□ -1.35
CNTN3Q9P232 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms