Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 AP001005.3-201ENST00000622049 129 ntBASIC4.26□□□□□ -1.73
CISHQ9NSE2 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.26□□□□□ -1.73
CISHQ9NSE2 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CISHQ9NSE2 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CISHQ9NSE2 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.26□□□□□ -1.73
CISHQ9NSE2 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.26□□□□□ -1.73
CISHQ9NSE2 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
CISHQ9NSE2 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CISHQ9NSE2 CASC19-255ENST00000641733 1385 ntBASIC4.26□□□□□ -1.73
CISHQ9NSE2 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.26□□□□□ -1.73
CISHQ9NSE2 AC245100.2-201ENST00000454544 1679 ntBASIC4.26□□□□□ -1.73
CISHQ9NSE2 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
CISHQ9NSE2 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
CISHQ9NSE2 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC4.25□□□□□ -1.73
CISHQ9NSE2 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC4.25□□□□□ -1.73
CISHQ9NSE2 SNORD74.4-201ENST00000364129 80 ntBASIC4.25□□□□□ -1.73
CISHQ9NSE2 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
CISHQ9NSE2 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
CISHQ9NSE2 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC4.25□□□□□ -1.73
CISHQ9NSE2 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.25□□□□□ -1.73
CISHQ9NSE2 PTP4A1P1-201ENST00000420539 515 ntBASIC4.25□□□□□ -1.73
CISHQ9NSE2 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.25□□□□□ -1.73
CISHQ9NSE2 AL117339.2-201ENST00000430475 180 ntBASIC4.25□□□□□ -1.73
CISHQ9NSE2 AL450263.2-201ENST00000439400 589 ntBASIC4.25□□□□□ -1.73
CISHQ9NSE2 HSFY6P-201ENST00000445573 403 ntBASIC4.25□□□□□ -1.73
CISHQ9NSE2 AL162151.2-201ENST00000448875 158 ntBASIC4.25□□□□□ -1.73
CISHQ9NSE2 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.25□□□□□ -1.73
CISHQ9NSE2 RPL23AP2-201ENST00000471227 466 ntBASIC4.25□□□□□ -1.73
CISHQ9NSE2 AC103987.1-201ENST00000473394 348 ntBASIC4.25□□□□□ -1.73
CISHQ9NSE2 AC110792.1-201ENST00000491826 472 ntBASIC4.25□□□□□ -1.73
CISHQ9NSE2 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.25□□□□□ -1.73
CISHQ9NSE2 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC4.25□□□□□ -1.73
CISHQ9NSE2 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC4.25□□□□□ -1.73
CISHQ9NSE2 AC007224.1-201ENST00000564410 144 ntBASIC4.25□□□□□ -1.73
CISHQ9NSE2 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC4.25□□□□□ -1.73
CISHQ9NSE2 AC124856.1-201ENST00000600819 896 ntBASIC4.25□□□□□ -1.73
CISHQ9NSE2 AC015813.4-201ENST00000610469 179 ntBASIC4.25□□□□□ -1.73
CISHQ9NSE2 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC4.25□□□□□ -1.73
CISHQ9NSE2 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC4.25□□□□□ -1.73
CISHQ9NSE2 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC4.25□□□□□ -1.73
CISHQ9NSE2 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
CISHQ9NSE2 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CISHQ9NSE2 AC016588.2-201ENST00000632484 3021 ntBASIC4.25□□□□□ -1.73
CISHQ9NSE2 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.25□□□□□ -1.73
CISHQ9NSE2 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
CISHQ9NSE2 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CISHQ9NSE2 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.24□□□□□ -1.73
CISHQ9NSE2 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.24□□□□□ -1.73
CISHQ9NSE2 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.24□□□□□ -1.73
CISHQ9NSE2 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CISHQ9NSE2 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CISHQ9NSE2 RNU4-44P-201ENST00000363050 141 ntBASIC4.24□□□□□ -1.73
CISHQ9NSE2 RNA5SP306-201ENST00000411087 107 ntBASIC4.24□□□□□ -1.73
CISHQ9NSE2 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CISHQ9NSE2 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC4.24□□□□□ -1.73
CISHQ9NSE2 NIPA2P1-201ENST00000426223 976 ntBASIC4.24□□□□□ -1.73
CISHQ9NSE2 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC4.24□□□□□ -1.73
CISHQ9NSE2 HIGD1AP4-201ENST00000430194 280 ntBASIC4.24□□□□□ -1.73
CISHQ9NSE2 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC4.24□□□□□ -1.73
CISHQ9NSE2 TPTE2P3-201ENST00000441562 1189 ntBASIC4.24□□□□□ -1.73
CISHQ9NSE2 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.24□□□□□ -1.73
CISHQ9NSE2 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.24□□□□□ -1.73
CISHQ9NSE2 FTH1P21-201ENST00000512179 511 ntBASIC4.24□□□□□ -1.73
CISHQ9NSE2 RNA5SP179-201ENST00000517284 121 ntBASIC4.24□□□□□ -1.73
CISHQ9NSE2 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC4.24□□□□□ -1.73
CISHQ9NSE2 YPEL5P3-201ENST00000547227 352 ntBASIC4.24□□□□□ -1.73
CISHQ9NSE2 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.24□□□□□ -1.73
CISHQ9NSE2 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.24□□□□□ -1.73
CISHQ9NSE2 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC4.24□□□□□ -1.73
CISHQ9NSE2 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.24□□□□□ -1.73
CISHQ9NSE2 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.24□□□□□ -1.73
CISHQ9NSE2 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.24□□□□□ -1.73
CISHQ9NSE2 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.24□□□□□ -1.73
CISHQ9NSE2 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.24□□□□□ -1.73
CISHQ9NSE2 AC020910.2-201ENST00000603635 610 ntBASIC4.24□□□□□ -1.73
CISHQ9NSE2 AC091167.4-201ENST00000605079 184 ntBASIC4.24□□□□□ -1.73
CISHQ9NSE2 AC128687.2-201ENST00000609657 566 ntBASIC4.24□□□□□ -1.73
CISHQ9NSE2 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.24□□□□□ -1.73
CISHQ9NSE2 AC015722.2-201ENST00000622210 551 ntBASIC4.24□□□□□ -1.73
CISHQ9NSE2 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC4.24□□□□□ -1.73
CISHQ9NSE2 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.24□□□□□ -1.73
CISHQ9NSE2 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.24□□□□□ -1.73
CISHQ9NSE2 MTND5P23-201ENST00000430812 1655 ntBASIC4.24□□□□□ -1.73
CISHQ9NSE2 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
CISHQ9NSE2 AC021242.1-201ENST00000507315 2035 ntBASIC4.24□□□□□ -1.73
CISHQ9NSE2 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
CISHQ9NSE2 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CISHQ9NSE2 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CISHQ9NSE2 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CISHQ9NSE2 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.23□□□□□ -1.73
CISHQ9NSE2 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
CISHQ9NSE2 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.23□□□□□ -1.73
CISHQ9NSE2 RNA5SP283-201ENST00000365604 119 ntBASIC4.23□□□□□ -1.73
CISHQ9NSE2 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.23□□□□□ -1.73
CISHQ9NSE2 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CISHQ9NSE2 RPL7AP73-201ENST00000413490 353 ntBASIC4.23□□□□□ -1.73
CISHQ9NSE2 AC011742.1-201ENST00000431448 434 ntBASIC4.23□□□□□ -1.73
CISHQ9NSE2 AC083863.1-201ENST00000438811 231 ntBASIC4.23□□□□□ -1.73
CISHQ9NSE2 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.23□□□□□ -1.73
CISHQ9NSE2 AC104849.1-201ENST00000462623 405 ntBASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms