Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC4.61□□□□□ -1.67
SIX2Q9NPC8 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.61□□□□□ -1.67
SIX2Q9NPC8 AC034236.3-201ENST00000605999 461 ntBASIC4.61□□□□□ -1.67
SIX2Q9NPC8 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.61□□□□□ -1.67
SIX2Q9NPC8 AC090948.1-201ENST00000607464 549 ntBASIC4.61□□□□□ -1.67
SIX2Q9NPC8 AC027449.1-201ENST00000608890 407 ntBASIC4.61□□□□□ -1.67
SIX2Q9NPC8 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.61□□□□□ -1.67
SIX2Q9NPC8 AL035461.2-201ENST00000619201 524 ntBASIC4.61□□□□□ -1.67
SIX2Q9NPC8 AC004808.1-201ENST00000627671 721 ntBASIC4.61□□□□□ -1.67
SIX2Q9NPC8 TMEM30CP-203ENST00000637814 1035 ntBASIC4.61□□□□□ -1.67
SIX2Q9NPC8 AC009452.1-201ENST00000640823 606 ntBASIC4.61□□□□□ -1.67
SIX2Q9NPC8 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
SIX2Q9NPC8 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SIX2Q9NPC8 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
SIX2Q9NPC8 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SIX2Q9NPC8 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SIX2Q9NPC8 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SIX2Q9NPC8 Z95327.2-201ENST00000414579 1873 ntBASIC4.6□□□□□ -1.67
SIX2Q9NPC8 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SIX2Q9NPC8 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.6□□□□□ -1.67
SIX2Q9NPC8 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
SIX2Q9NPC8 AC025031.4-201ENST00000621248 3271 ntBASIC4.6□□□□□ -1.67
SIX2Q9NPC8 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.6□□□□□ -1.67
SIX2Q9NPC8 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
SIX2Q9NPC8 MIR122-201ENST00000385044 85 ntBASIC4.6□□□□□ -1.67
SIX2Q9NPC8 TAF9BP2-201ENST00000400856 499 ntBASIC4.6□□□□□ -1.67
SIX2Q9NPC8 AL161631.1-201ENST00000417933 486 ntBASIC4.6□□□□□ -1.67
SIX2Q9NPC8 AL358176.3-201ENST00000420757 454 ntBASIC4.6□□□□□ -1.67
SIX2Q9NPC8 RPS27AP7-201ENST00000422792 455 ntBASIC4.6□□□□□ -1.67
SIX2Q9NPC8 RBMY1KP-201ENST00000423480 476 ntBASIC4.6□□□□□ -1.67
SIX2Q9NPC8 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC4.6□□□□□ -1.67
SIX2Q9NPC8 AC011242.1-201ENST00000433596 1158 ntBASIC4.6□□□□□ -1.67
SIX2Q9NPC8 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.6□□□□□ -1.67
SIX2Q9NPC8 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SIX2Q9NPC8 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.6□□□□□ -1.67
SIX2Q9NPC8 LARP7P4-201ENST00000481075 878 ntBASIC4.6□□□□□ -1.67
SIX2Q9NPC8 SUMO1P1-201ENST00000497904 306 ntBASIC4.6□□□□□ -1.67
SIX2Q9NPC8 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.6□□□□□ -1.67
SIX2Q9NPC8 AC010460.2-201ENST00000509054 677 ntBASIC4.6□□□□□ -1.67
SIX2Q9NPC8 AC121161.1-201ENST00000510606 652 ntBASIC4.6□□□□□ -1.67
SIX2Q9NPC8 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC4.6□□□□□ -1.67
SIX2Q9NPC8 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC4.6□□□□□ -1.67
SIX2Q9NPC8 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SIX2Q9NPC8 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.6□□□□□ -1.67
SIX2Q9NPC8 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC4.6□□□□□ -1.67
SIX2Q9NPC8 CD24P2-201ENST00000565486 219 ntBASIC4.6□□□□□ -1.67
SIX2Q9NPC8 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC4.6□□□□□ -1.67
SIX2Q9NPC8 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC4.6□□□□□ -1.67
SIX2Q9NPC8 RNU6-84P-201ENST00000607737 102 ntBASIC4.6□□□□□ -1.67
SIX2Q9NPC8 AC004241.3-201ENST00000611728 517 ntBASIC4.6□□□□□ -1.67
SIX2Q9NPC8 AL050303.3-201ENST00000613704 284 ntBASIC4.6□□□□□ -1.67
SIX2Q9NPC8 AP003476.1-201ENST00000623984 516 ntBASIC4.6□□□□□ -1.67
SIX2Q9NPC8 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC4.6□□□□□ -1.67
SIX2Q9NPC8 AC140479.6-201ENST00000633535 357 ntBASIC4.6□□□□□ -1.67
SIX2Q9NPC8 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SIX2Q9NPC8 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SIX2Q9NPC8 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.6□□□□□ -1.67
SIX2Q9NPC8 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC4.6□□□□□ -1.67
SIX2Q9NPC8 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC4.6□□□□□ -1.67
SIX2Q9NPC8 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.59□□□□□ -1.67
SIX2Q9NPC8 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SIX2Q9NPC8 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.59□□□□□ -1.67
SIX2Q9NPC8 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.59□□□□□ -1.67
SIX2Q9NPC8 MIR16-2-201ENST00000362117 81 ntBASIC4.59□□□□□ -1.67
SIX2Q9NPC8 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC4.59□□□□□ -1.67
SIX2Q9NPC8 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
SIX2Q9NPC8 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SIX2Q9NPC8 MIR192-201ENST00000384915 110 ntBASIC4.59□□□□□ -1.67
SIX2Q9NPC8 MIR513A2-201ENST00000385249 127 ntBASIC4.59□□□□□ -1.67
SIX2Q9NPC8 MTATP6P31-201ENST00000406985 692 ntBASIC4.59□□□□□ -1.67
SIX2Q9NPC8 ELOCP19-201ENST00000411919 318 ntBASIC4.59□□□□□ -1.67
SIX2Q9NPC8 BTF3P9-201ENST00000418784 283 ntBASIC4.59□□□□□ -1.67
SIX2Q9NPC8 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC4.59□□□□□ -1.67
SIX2Q9NPC8 AL732292.1-201ENST00000426692 226 ntBASIC4.59□□□□□ -1.67
SIX2Q9NPC8 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.59□□□□□ -1.67
SIX2Q9NPC8 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC4.59□□□□□ -1.67
SIX2Q9NPC8 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC4.59□□□□□ -1.67
SIX2Q9NPC8 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.59□□□□□ -1.67
SIX2Q9NPC8 PHBP16-201ENST00000446318 950 ntBASIC4.59□□□□□ -1.67
SIX2Q9NPC8 AL096829.2-201ENST00000446582 742 ntBASIC4.59□□□□□ -1.67
SIX2Q9NPC8 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SIX2Q9NPC8 EEF1A1P1-201ENST00000447052 739 ntBASIC4.59□□□□□ -1.67
SIX2Q9NPC8 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SIX2Q9NPC8 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.59□□□□□ -1.67
SIX2Q9NPC8 AC092691.2-201ENST00000461787 803 ntBASIC4.59□□□□□ -1.67
SIX2Q9NPC8 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC4.59□□□□□ -1.67
SIX2Q9NPC8 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC4.59□□□□□ -1.67
SIX2Q9NPC8 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC4.59□□□□□ -1.67
SIX2Q9NPC8 NIP7P2-201ENST00000485801 544 ntBASIC4.59□□□□□ -1.67
SIX2Q9NPC8 AC010374.1-201ENST00000503762 1237 ntBASIC4.59□□□□□ -1.67
SIX2Q9NPC8 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SIX2Q9NPC8 GOLGA5P1-201ENST00000507317 980 ntBASIC4.59□□□□□ -1.67
SIX2Q9NPC8 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.59□□□□□ -1.67
SIX2Q9NPC8 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SIX2Q9NPC8 RNU5A-7P-201ENST00000515979 116 ntBASIC4.59□□□□□ -1.67
SIX2Q9NPC8 HMGB1P19-201ENST00000517578 577 ntBASIC4.59□□□□□ -1.67
SIX2Q9NPC8 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC4.59□□□□□ -1.67
SIX2Q9NPC8 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC4.59□□□□□ -1.67
SIX2Q9NPC8 AC104115.2-201ENST00000523026 687 ntBASIC4.59□□□□□ -1.67
SIX2Q9NPC8 OR8X1P-201ENST00000534542 869 ntBASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms