Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.06□□□□□ -1.76
CCNB1IP1Q9NPC3 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC4.06□□□□□ -1.76
CCNB1IP1Q9NPC3 MIR4270-201ENST00000581799 70 ntBASIC4.06□□□□□ -1.76
CCNB1IP1Q9NPC3 VN1R84P-201ENST00000593697 235 ntBASIC4.06□□□□□ -1.76
CCNB1IP1Q9NPC3 AC010680.3-201ENST00000604215 520 ntBASIC4.06□□□□□ -1.76
CCNB1IP1Q9NPC3 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.06□□□□□ -1.76
CCNB1IP1Q9NPC3 AC139769.3-201ENST00000618383 175 ntBASIC4.06□□□□□ -1.76
CCNB1IP1Q9NPC3 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.06□□□□□ -1.76
CCNB1IP1Q9NPC3 AL391597.1-201ENST00000618707 694 ntBASIC4.06□□□□□ -1.76
CCNB1IP1Q9NPC3 AC091953.3-201ENST00000623220 236 ntBASIC4.06□□□□□ -1.76
CCNB1IP1Q9NPC3 AC019278.1-201ENST00000623516 479 ntBASIC4.06□□□□□ -1.76
CCNB1IP1Q9NPC3 AP001784.1-201ENST00000624107 428 ntBASIC4.06□□□□□ -1.76
CCNB1IP1Q9NPC3 AC008785.1-201ENST00000624475 456 ntBASIC4.06□□□□□ -1.76
CCNB1IP1Q9NPC3 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.06□□□□□ -1.76
CCNB1IP1Q9NPC3 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC4.06□□□□□ -1.76
CCNB1IP1Q9NPC3 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CCNB1IP1Q9NPC3 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CCNB1IP1Q9NPC3 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.06□□□□□ -1.76
CCNB1IP1Q9NPC3 AC134882.1-201ENST00000603738 1676 ntBASIC4.06□□□□□ -1.76
CCNB1IP1Q9NPC3 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.06□□□□□ -1.76
CCNB1IP1Q9NPC3 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.06□□□□□ -1.76
CCNB1IP1Q9NPC3 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CCNB1IP1Q9NPC3 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC4.05□□□□□ -1.76
CCNB1IP1Q9NPC3 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.05□□□□□ -1.76
CCNB1IP1Q9NPC3 AL118496.1-201ENST00000440201 1812 ntBASIC4.05□□□□□ -1.76
CCNB1IP1Q9NPC3 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.05□□□□□ -1.76
CCNB1IP1Q9NPC3 RNU4-23P-201ENST00000362839 140 ntBASIC4.05□□□□□ -1.76
CCNB1IP1Q9NPC3 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
CCNB1IP1Q9NPC3 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CCNB1IP1Q9NPC3 ZNF603P-201ENST00000405613 487 ntBASIC4.05□□□□□ -1.76
CCNB1IP1Q9NPC3 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.05□□□□□ -1.76
CCNB1IP1Q9NPC3 AL603766.1-201ENST00000407763 664 ntBASIC4.05□□□□□ -1.76
CCNB1IP1Q9NPC3 MTND2P11-201ENST00000423638 648 ntBASIC4.05□□□□□ -1.76
CCNB1IP1Q9NPC3 AC009965.2-201ENST00000425328 970 ntBASIC4.05□□□□□ -1.76
CCNB1IP1Q9NPC3 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC4.05□□□□□ -1.76
CCNB1IP1Q9NPC3 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC4.05□□□□□ -1.76
CCNB1IP1Q9NPC3 HMGB1P16-201ENST00000447155 540 ntBASIC4.05□□□□□ -1.76
CCNB1IP1Q9NPC3 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC4.05□□□□□ -1.76
CCNB1IP1Q9NPC3 PANCR-201ENST00000503456 493 ntTSL 5 BASIC4.05□□□□□ -1.76
CCNB1IP1Q9NPC3 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.05□□□□□ -1.76
CCNB1IP1Q9NPC3 OR7H2P-201ENST00000513483 306 ntBASIC4.05□□□□□ -1.76
CCNB1IP1Q9NPC3 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.05□□□□□ -1.76
CCNB1IP1Q9NPC3 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC4.05□□□□□ -1.76
CCNB1IP1Q9NPC3 RNU6-1308P-201ENST00000516817 103 ntBASIC4.05□□□□□ -1.76
CCNB1IP1Q9NPC3 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.05□□□□□ -1.76
CCNB1IP1Q9NPC3 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.05□□□□□ -1.76
CCNB1IP1Q9NPC3 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC4.05□□□□□ -1.76
CCNB1IP1Q9NPC3 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CCNB1IP1Q9NPC3 MIR4480-201ENST00000582492 71 ntBASIC4.05□□□□□ -1.76
CCNB1IP1Q9NPC3 MIR4512-201ENST00000583257 77 ntBASIC4.05□□□□□ -1.76
CCNB1IP1Q9NPC3 AL133338.2-201ENST00000604292 736 ntBASIC4.05□□□□□ -1.76
CCNB1IP1Q9NPC3 AL096803.3-201ENST00000609032 532 ntBASIC4.05□□□□□ -1.76
CCNB1IP1Q9NPC3 AC243654.2-201ENST00000612843 443 ntBASIC4.05□□□□□ -1.76
CCNB1IP1Q9NPC3 AC100827.5-201ENST00000615883 426 ntBASIC4.05□□□□□ -1.76
CCNB1IP1Q9NPC3 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CCNB1IP1Q9NPC3 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CCNB1IP1Q9NPC3 LINC00622-201ENST00000562811 1570 ntBASIC4.05□□□□□ -1.76
CCNB1IP1Q9NPC3 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CCNB1IP1Q9NPC3 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
CCNB1IP1Q9NPC3 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CCNB1IP1Q9NPC3 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
CCNB1IP1Q9NPC3 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
CCNB1IP1Q9NPC3 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CCNB1IP1Q9NPC3 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.05□□□□□ -1.76
CCNB1IP1Q9NPC3 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.05□□□□□ -1.76
CCNB1IP1Q9NPC3 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CCNB1IP1Q9NPC3 AC017007.4-201ENST00000503353 1352 ntBASIC4.04□□□□□ -1.76
CCNB1IP1Q9NPC3 AC093311.1-201ENST00000506586 2021 ntBASIC4.04□□□□□ -1.76
CCNB1IP1Q9NPC3 AC125257.1-201ENST00000560400 2930 ntBASIC4.04□□□□□ -1.76
CCNB1IP1Q9NPC3 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
CCNB1IP1Q9NPC3 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CCNB1IP1Q9NPC3 RN7SKP44-201ENST00000363602 316 ntBASIC4.04□□□□□ -1.76
CCNB1IP1Q9NPC3 SNORA58B-201ENST00000364259 136 ntBASIC4.04□□□□□ -1.76
CCNB1IP1Q9NPC3 RNA5SP87-201ENST00000384155 118 ntBASIC4.04□□□□□ -1.76
CCNB1IP1Q9NPC3 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.04□□□□□ -1.76
CCNB1IP1Q9NPC3 RN7SKP106-201ENST00000410832 272 ntBASIC4.04□□□□□ -1.76
CCNB1IP1Q9NPC3 RNA5SP498-201ENST00000411342 120 ntBASIC4.04□□□□□ -1.76
CCNB1IP1Q9NPC3 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CCNB1IP1Q9NPC3 AL391219.1-201ENST00000422570 483 ntBASIC4.04□□□□□ -1.76
CCNB1IP1Q9NPC3 AC234779.1-201ENST00000425910 285 ntBASIC4.04□□□□□ -1.76
CCNB1IP1Q9NPC3 RPS12P10-201ENST00000427031 377 ntBASIC4.04□□□□□ -1.76
CCNB1IP1Q9NPC3 NDUFA5P10-201ENST00000432147 357 ntBASIC4.04□□□□□ -1.76
CCNB1IP1Q9NPC3 NDUFA5P1-201ENST00000433858 341 ntBASIC4.04□□□□□ -1.76
CCNB1IP1Q9NPC3 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC4.04□□□□□ -1.76
CCNB1IP1Q9NPC3 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.04□□□□□ -1.76
CCNB1IP1Q9NPC3 RPL23AP71-201ENST00000470966 469 ntBASIC4.04□□□□□ -1.76
CCNB1IP1Q9NPC3 OR52A4P-201ENST00000472867 958 ntBASIC4.04□□□□□ -1.76
CCNB1IP1Q9NPC3 RPS27AP16-201ENST00000492222 470 ntBASIC4.04□□□□□ -1.76
CCNB1IP1Q9NPC3 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC4.04□□□□□ -1.76
CCNB1IP1Q9NPC3 HIGD1AP18-201ENST00000520730 278 ntBASIC4.04□□□□□ -1.76
CCNB1IP1Q9NPC3 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC4.04□□□□□ -1.76
CCNB1IP1Q9NPC3 OR7E10P-201ENST00000526420 991 ntBASIC4.04□□□□□ -1.76
CCNB1IP1Q9NPC3 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.04□□□□□ -1.76
CCNB1IP1Q9NPC3 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.04□□□□□ -1.76
CCNB1IP1Q9NPC3 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.04□□□□□ -1.76
CCNB1IP1Q9NPC3 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.04□□□□□ -1.76
CCNB1IP1Q9NPC3 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.04□□□□□ -1.76
CCNB1IP1Q9NPC3 AL160290.3-201ENST00000604869 165 ntBASIC4.04□□□□□ -1.76
CCNB1IP1Q9NPC3 AC012603.1-201ENST00000606424 528 ntBASIC4.04□□□□□ -1.76
CCNB1IP1Q9NPC3 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms