Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC4.75□□□□□ -1.65
BRF2Q9HAW0 RN7SL435P-201ENST00000584418 282 ntBASIC4.75□□□□□ -1.65
BRF2Q9HAW0 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.75□□□□□ -1.65
BRF2Q9HAW0 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4.75□□□□□ -1.65
BRF2Q9HAW0 AL583856.2-201ENST00000606298 543 ntBASIC4.75□□□□□ -1.65
BRF2Q9HAW0 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC4.75□□□□□ -1.65
BRF2Q9HAW0 OR1S1-201ENST00000624470 978 ntBASIC4.75□□□□□ -1.65
BRF2Q9HAW0 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.75□□□□□ -1.65
BRF2Q9HAW0 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.75□□□□□ -1.65
BRF2Q9HAW0 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.75□□□□□ -1.65
BRF2Q9HAW0 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.75□□□□□ -1.65
BRF2Q9HAW0 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.75□□□□□ -1.65
BRF2Q9HAW0 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
BRF2Q9HAW0 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
BRF2Q9HAW0 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
BRF2Q9HAW0 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.75□□□□□ -1.65
BRF2Q9HAW0 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
BRF2Q9HAW0 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
BRF2Q9HAW0 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC4.74□□□□□ -1.65
BRF2Q9HAW0 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
BRF2Q9HAW0 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
BRF2Q9HAW0 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
BRF2Q9HAW0 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.74□□□□□ -1.65
BRF2Q9HAW0 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.74□□□□□ -1.65
BRF2Q9HAW0 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
BRF2Q9HAW0 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC4.74□□□□□ -1.65
BRF2Q9HAW0 SNORD116-12-201ENST00000384468 92 ntBASIC4.74□□□□□ -1.65
BRF2Q9HAW0 PRRC2CP1-201ENST00000404428 159 ntBASIC4.74□□□□□ -1.65
BRF2Q9HAW0 RPS3AP25-201ENST00000411660 793 ntBASIC4.74□□□□□ -1.65
BRF2Q9HAW0 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.74□□□□□ -1.65
BRF2Q9HAW0 AC079355.1-201ENST00000421770 223 ntBASIC4.74□□□□□ -1.65
BRF2Q9HAW0 MTCO2P17-201ENST00000424336 677 ntBASIC4.74□□□□□ -1.65
BRF2Q9HAW0 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC4.74□□□□□ -1.65
BRF2Q9HAW0 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC4.74□□□□□ -1.65
BRF2Q9HAW0 CEACAMP1-201ENST00000434624 1035 ntBASIC4.74□□□□□ -1.65
BRF2Q9HAW0 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.74□□□□□ -1.65
BRF2Q9HAW0 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC4.74□□□□□ -1.65
BRF2Q9HAW0 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.74□□□□□ -1.65
BRF2Q9HAW0 RPL34P20-201ENST00000442771 351 ntBASIC4.74□□□□□ -1.65
BRF2Q9HAW0 MTCYBP42-201ENST00000444653 1130 ntBASIC4.74□□□□□ -1.65
BRF2Q9HAW0 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.74□□□□□ -1.65
BRF2Q9HAW0 HMGB3P21-201ENST00000452483 547 ntBASIC4.74□□□□□ -1.65
BRF2Q9HAW0 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.74□□□□□ -1.65
BRF2Q9HAW0 RN7SL97P-201ENST00000486780 299 ntBASIC4.74□□□□□ -1.65
BRF2Q9HAW0 RPS27P23-201ENST00000487608 251 ntBASIC4.74□□□□□ -1.65
BRF2Q9HAW0 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC4.74□□□□□ -1.65
BRF2Q9HAW0 HIGD1AP14-201ENST00000507617 282 ntBASIC4.74□□□□□ -1.65
BRF2Q9HAW0 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC4.74□□□□□ -1.65
BRF2Q9HAW0 RNU6-488P-201ENST00000515918 99 ntBASIC4.74□□□□□ -1.65
BRF2Q9HAW0 RN7SKP82-201ENST00000516786 223 ntBASIC4.74□□□□□ -1.65
BRF2Q9HAW0 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC4.74□□□□□ -1.65
BRF2Q9HAW0 HIGD1AP6-201ENST00000521833 279 ntBASIC4.74□□□□□ -1.65
BRF2Q9HAW0 AF279873.1-201ENST00000523393 313 ntBASIC4.74□□□□□ -1.65
BRF2Q9HAW0 OR8G5-201ENST00000524943 1041 ntBASIC4.74□□□□□ -1.65
BRF2Q9HAW0 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC4.74□□□□□ -1.65
BRF2Q9HAW0 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC4.74□□□□□ -1.65
BRF2Q9HAW0 AC092490.3-201ENST00000545370 572 ntBASIC4.74□□□□□ -1.65
BRF2Q9HAW0 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC4.74□□□□□ -1.65
BRF2Q9HAW0 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC4.74□□□□□ -1.65
BRF2Q9HAW0 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4.74□□□□□ -1.65
BRF2Q9HAW0 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.74□□□□□ -1.65
BRF2Q9HAW0 MIR4666A-201ENST00000580160 79 ntBASIC4.74□□□□□ -1.65
BRF2Q9HAW0 AC090312.1-201ENST00000580637 348 ntBASIC4.74□□□□□ -1.65
BRF2Q9HAW0 MIR4472-2-201ENST00000582069 67 ntBASIC4.74□□□□□ -1.65
BRF2Q9HAW0 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC4.74□□□□□ -1.65
BRF2Q9HAW0 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
BRF2Q9HAW0 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC4.74□□□□□ -1.65
BRF2Q9HAW0 SUMO2P15-201ENST00000604285 278 ntBASIC4.74□□□□□ -1.65
BRF2Q9HAW0 RNU4-5P-201ENST00000607255 135 ntBASIC4.74□□□□□ -1.65
BRF2Q9HAW0 AL627230.1-201ENST00000613077 211 ntBASIC4.74□□□□□ -1.65
BRF2Q9HAW0 AL591926.8-201ENST00000616876 211 ntBASIC4.74□□□□□ -1.65
BRF2Q9HAW0 AC123767.1-202ENST00000620407 817 ntBASIC4.74□□□□□ -1.65
BRF2Q9HAW0 AC019206.1-201ENST00000621938 425 ntBASIC4.74□□□□□ -1.65
BRF2Q9HAW0 AL078595.3-201ENST00000623815 1166 ntBASIC4.74□□□□□ -1.65
BRF2Q9HAW0 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC4.74□□□□□ -1.65
BRF2Q9HAW0 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
BRF2Q9HAW0 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
BRF2Q9HAW0 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
BRF2Q9HAW0 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.74□□□□□ -1.65
BRF2Q9HAW0 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
BRF2Q9HAW0 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
BRF2Q9HAW0 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
BRF2Q9HAW0 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
BRF2Q9HAW0 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.74□□□□□ -1.65
BRF2Q9HAW0 AL731566.1-201ENST00000620490 1937 ntBASIC4.74□□□□□ -1.65
BRF2Q9HAW0 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
BRF2Q9HAW0 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.74□□□□□ -1.65
BRF2Q9HAW0 DDX18P5-201ENST00000534547 1306 ntBASIC4.73□□□□□ -1.65
BRF2Q9HAW0 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC4.73□□□□□ -1.65
BRF2Q9HAW0 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.73□□□□□ -1.65
BRF2Q9HAW0 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
BRF2Q9HAW0 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.73□□□□□ -1.65
BRF2Q9HAW0 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.73□□□□□ -1.65
BRF2Q9HAW0 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
BRF2Q9HAW0 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.73□□□□□ -1.65
BRF2Q9HAW0 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.73□□□□□ -1.65
BRF2Q9HAW0 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.73□□□□□ -1.65
BRF2Q9HAW0 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
BRF2Q9HAW0 AC019155.1-201ENST00000382242 574 ntBASIC4.73□□□□□ -1.65
BRF2Q9HAW0 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms