Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC5.05□□□□□ -1.6
EBF3Q9H4W6 AC111000.3-201ENST00000508057 576 ntBASIC5.05□□□□□ -1.6
EBF3Q9H4W6 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.05□□□□□ -1.6
EBF3Q9H4W6 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC5.05□□□□□ -1.6
EBF3Q9H4W6 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC5.05□□□□□ -1.6
EBF3Q9H4W6 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.05□□□□□ -1.6
EBF3Q9H4W6 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC5.05□□□□□ -1.6
EBF3Q9H4W6 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC5.05□□□□□ -1.6
EBF3Q9H4W6 ZNF321P-202ENST00000550843 495 ntBASIC5.05□□□□□ -1.6
EBF3Q9H4W6 AL512310.9-201ENST00000553311 948 ntBASIC5.05□□□□□ -1.6
EBF3Q9H4W6 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.05□□□□□ -1.6
EBF3Q9H4W6 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
EBF3Q9H4W6 AL353778.1-201ENST00000603149 408 ntBASIC5.05□□□□□ -1.6
EBF3Q9H4W6 AL592494.3-201ENST00000609485 464 ntBASIC5.05□□□□□ -1.6
EBF3Q9H4W6 AC007497.1-201ENST00000610421 561 ntBASIC5.05□□□□□ -1.6
EBF3Q9H4W6 AC009318.3-201ENST00000616916 503 ntBASIC5.05□□□□□ -1.6
EBF3Q9H4W6 AL133370.2-201ENST00000619934 439 ntBASIC5.05□□□□□ -1.6
EBF3Q9H4W6 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
EBF3Q9H4W6 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
EBF3Q9H4W6 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
EBF3Q9H4W6 CDC27P2-201ENST00000425026 1922 ntBASIC5.05□□□□□ -1.6
EBF3Q9H4W6 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
EBF3Q9H4W6 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
EBF3Q9H4W6 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
EBF3Q9H4W6 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.04□□□□□ -1.6
EBF3Q9H4W6 MUC2-202ENST00000613187 4845 ntBASIC5.04□□□□□ -1.6
EBF3Q9H4W6 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
EBF3Q9H4W6 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
EBF3Q9H4W6 AL590240.1-201ENST00000334118 313 ntBASIC5.04□□□□□ -1.6
EBF3Q9H4W6 Y_RNA.169-201ENST00000363745 96 ntBASIC5.04□□□□□ -1.6
EBF3Q9H4W6 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
EBF3Q9H4W6 Y_RNA.436-201ENST00000384097 102 ntBASIC5.04□□□□□ -1.6
EBF3Q9H4W6 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC5.04□□□□□ -1.6
EBF3Q9H4W6 RN7SKP106-201ENST00000410832 272 ntBASIC5.04□□□□□ -1.6
EBF3Q9H4W6 RSU1P3-201ENST00000412878 835 ntBASIC5.04□□□□□ -1.6
EBF3Q9H4W6 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
EBF3Q9H4W6 MTND2P18-201ENST00000419962 1030 ntBASIC5.04□□□□□ -1.6
EBF3Q9H4W6 SLC9B1P4-201ENST00000421957 1288 ntBASIC5.04□□□□□ -1.6
EBF3Q9H4W6 VN1R42P-201ENST00000424651 344 ntBASIC5.04□□□□□ -1.6
EBF3Q9H4W6 FO393414.1-201ENST00000428697 1184 ntBASIC5.04□□□□□ -1.6
EBF3Q9H4W6 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC5.04□□□□□ -1.6
EBF3Q9H4W6 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.04□□□□□ -1.6
EBF3Q9H4W6 NPM1P33-201ENST00000438918 872 ntBASIC5.04□□□□□ -1.6
EBF3Q9H4W6 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC5.04□□□□□ -1.6
EBF3Q9H4W6 AL031584.1-201ENST00000447169 754 ntBASIC5.04□□□□□ -1.6
EBF3Q9H4W6 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.04□□□□□ -1.6
EBF3Q9H4W6 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC5.04□□□□□ -1.6
EBF3Q9H4W6 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC5.04□□□□□ -1.6
EBF3Q9H4W6 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
EBF3Q9H4W6 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC5.04□□□□□ -1.6
EBF3Q9H4W6 HMGB1P26-201ENST00000452520 628 ntBASIC5.04□□□□□ -1.6
EBF3Q9H4W6 AL691482.1-201ENST00000453255 87 ntBASIC5.04□□□□□ -1.6
EBF3Q9H4W6 MTND2P28-201ENST00000457540 1044 ntBASIC5.04□□□□□ -1.6
EBF3Q9H4W6 snoU13.1-201ENST00000459157 104 ntBASIC5.04□□□□□ -1.6
EBF3Q9H4W6 FTH1P2-201ENST00000466086 412 ntBASIC5.04□□□□□ -1.6
EBF3Q9H4W6 RPS17P11-201ENST00000474297 293 ntBASIC5.04□□□□□ -1.6
EBF3Q9H4W6 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC5.04□□□□□ -1.6
EBF3Q9H4W6 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC5.04□□□□□ -1.6
EBF3Q9H4W6 BET1P1-201ENST00000482276 359 ntBASIC5.04□□□□□ -1.6
EBF3Q9H4W6 AC008427.1-201ENST00000503102 655 ntBASIC5.04□□□□□ -1.6
EBF3Q9H4W6 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC5.04□□□□□ -1.6
EBF3Q9H4W6 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC5.04□□□□□ -1.6
EBF3Q9H4W6 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC5.04□□□□□ -1.6
EBF3Q9H4W6 AC008494.2-201ENST00000514544 370 ntBASIC5.04□□□□□ -1.6
EBF3Q9H4W6 RNU6-276P-201ENST00000516114 96 ntBASIC5.04□□□□□ -1.6
EBF3Q9H4W6 RN7SKP92-201ENST00000517266 244 ntBASIC5.04□□□□□ -1.6
EBF3Q9H4W6 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC5.04□□□□□ -1.6
EBF3Q9H4W6 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.04□□□□□ -1.6
EBF3Q9H4W6 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC5.04□□□□□ -1.6
EBF3Q9H4W6 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
EBF3Q9H4W6 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
EBF3Q9H4W6 MTCYBP23-201ENST00000558717 1102 ntBASIC5.04□□□□□ -1.6
EBF3Q9H4W6 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC5.04□□□□□ -1.6
EBF3Q9H4W6 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC5.04□□□□□ -1.6
EBF3Q9H4W6 VN1R78P-201ENST00000597393 564 ntBASIC5.04□□□□□ -1.6
EBF3Q9H4W6 AC005034.4-201ENST00000603612 899 ntBASIC5.04□□□□□ -1.6
EBF3Q9H4W6 AC107952.2-201ENST00000606048 486 ntBASIC5.04□□□□□ -1.6
EBF3Q9H4W6 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.04□□□□□ -1.6
EBF3Q9H4W6 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
EBF3Q9H4W6 AL049794.2-201ENST00000616301 365 ntBASIC5.04□□□□□ -1.6
EBF3Q9H4W6 AC092184.1-201ENST00000625042 715 ntBASIC5.04□□□□□ -1.6
EBF3Q9H4W6 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC5.04□□□□□ -1.6
EBF3Q9H4W6 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC5.04□□□□□ -1.6
EBF3Q9H4W6 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
EBF3Q9H4W6 NCLP2-201ENST00000416078 1462 ntBASIC5.04□□□□□ -1.6
EBF3Q9H4W6 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
EBF3Q9H4W6 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.04□□□□□ -1.6
EBF3Q9H4W6 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.04□□□□□ -1.6
EBF3Q9H4W6 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.04□□□□□ -1.6
EBF3Q9H4W6 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
EBF3Q9H4W6 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
EBF3Q9H4W6 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
EBF3Q9H4W6 ZNF90P1-201ENST00000480493 1951 ntBASIC5.04□□□□□ -1.6
EBF3Q9H4W6 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.03□□□□□ -1.6
EBF3Q9H4W6 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
EBF3Q9H4W6 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
EBF3Q9H4W6 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.03□□□□□ -1.6
EBF3Q9H4W6 AC063976.2-201ENST00000425667 3556 ntBASIC5.03□□□□□ -1.6
EBF3Q9H4W6 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
EBF3Q9H4W6 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 222.5 ms