Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CCSER1Q9C0I3 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CCSER1Q9C0I3 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
CCSER1Q9C0I3 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCSER1Q9C0I3 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCSER1Q9C0I3 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCSER1Q9C0I3 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CCSER1Q9C0I3 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
CCSER1Q9C0I3 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.81□□□□□ -1.64
CCSER1Q9C0I3 RN7SKP222-201ENST00000410651 315 ntBASIC4.81□□□□□ -1.64
CCSER1Q9C0I3 AC244453.4-201ENST00000419150 388 ntBASIC4.81□□□□□ -1.64
CCSER1Q9C0I3 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.81□□□□□ -1.64
CCSER1Q9C0I3 MTCO3P21-201ENST00000430791 643 ntBASIC4.81□□□□□ -1.64
CCSER1Q9C0I3 RPS29P17-201ENST00000430795 166 ntBASIC4.81□□□□□ -1.64
CCSER1Q9C0I3 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.81□□□□□ -1.64
CCSER1Q9C0I3 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.81□□□□□ -1.64
CCSER1Q9C0I3 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC4.81□□□□□ -1.64
CCSER1Q9C0I3 CEACAMP1-201ENST00000434624 1035 ntBASIC4.81□□□□□ -1.64
CCSER1Q9C0I3 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.81□□□□□ -1.64
CCSER1Q9C0I3 EIF4A1P11-201ENST00000451239 222 ntBASIC4.81□□□□□ -1.64
CCSER1Q9C0I3 EIF4A2P2-201ENST00000455776 1070 ntBASIC4.81□□□□□ -1.64
CCSER1Q9C0I3 RN7SL860P-201ENST00000473738 223 ntBASIC4.81□□□□□ -1.64
CCSER1Q9C0I3 AL592156.1-201ENST00000508758 304 ntBASIC4.81□□□□□ -1.64
CCSER1Q9C0I3 AC108120.2-201ENST00000512973 294 ntBASIC4.81□□□□□ -1.64
CCSER1Q9C0I3 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.81□□□□□ -1.64
CCSER1Q9C0I3 AC016550.3-201ENST00000515706 767 ntBASIC4.81□□□□□ -1.64
CCSER1Q9C0I3 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.81□□□□□ -1.64
CCSER1Q9C0I3 AC068714.1-201ENST00000559623 800 ntBASIC4.81□□□□□ -1.64
CCSER1Q9C0I3 AC090515.3-201ENST00000560431 315 ntBASIC4.81□□□□□ -1.64
CCSER1Q9C0I3 CYP4A43P-201ENST00000568156 121 ntBASIC4.81□□□□□ -1.64
CCSER1Q9C0I3 MIR4277-201ENST00000578298 84 ntBASIC4.81□□□□□ -1.64
CCSER1Q9C0I3 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC4.81□□□□□ -1.64
CCSER1Q9C0I3 MIR432-201ENST00000606207 94 ntBASIC4.81□□□□□ -1.64
CCSER1Q9C0I3 AC135803.1-201ENST00000608748 565 ntBASIC4.81□□□□□ -1.64
CCSER1Q9C0I3 AL121873.1-201ENST00000616013 524 ntBASIC4.81□□□□□ -1.64
CCSER1Q9C0I3 AC138907.10-201ENST00000623708 983 ntBASIC4.81□□□□□ -1.64
CCSER1Q9C0I3 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CCSER1Q9C0I3 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.81□□□□□ -1.64
CCSER1Q9C0I3 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCSER1Q9C0I3 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
CCSER1Q9C0I3 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCSER1Q9C0I3 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.8□□□□□ -1.64
CCSER1Q9C0I3 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCSER1Q9C0I3 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCSER1Q9C0I3 RNU6-304P-201ENST00000364855 107 ntBASIC4.8□□□□□ -1.64
CCSER1Q9C0I3 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.8□□□□□ -1.64
CCSER1Q9C0I3 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCSER1Q9C0I3 RNA5SP498-201ENST00000411342 120 ntBASIC4.8□□□□□ -1.64
CCSER1Q9C0I3 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.8□□□□□ -1.64
CCSER1Q9C0I3 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC4.8□□□□□ -1.64
CCSER1Q9C0I3 Z99127.2-201ENST00000441426 334 ntBASIC4.8□□□□□ -1.64
CCSER1Q9C0I3 AL606490.8-201ENST00000441624 319 ntBASIC4.8□□□□□ -1.64
CCSER1Q9C0I3 AL353898.1-201ENST00000444055 238 ntBASIC4.8□□□□□ -1.64
CCSER1Q9C0I3 RPL23AP24-201ENST00000458203 385 ntBASIC4.8□□□□□ -1.64
CCSER1Q9C0I3 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.8□□□□□ -1.64
CCSER1Q9C0I3 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CCSER1Q9C0I3 HMGB1P47-201ENST00000511281 589 ntBASIC4.8□□□□□ -1.64
CCSER1Q9C0I3 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.8□□□□□ -1.64
CCSER1Q9C0I3 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CCSER1Q9C0I3 HMGB3P26-201ENST00000560051 582 ntBASIC4.8□□□□□ -1.64
CCSER1Q9C0I3 ELOCP28-201ENST00000590044 317 ntBASIC4.8□□□□□ -1.64
CCSER1Q9C0I3 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC4.8□□□□□ -1.64
CCSER1Q9C0I3 AL445363.3-201ENST00000623080 671 ntBASIC4.8□□□□□ -1.64
CCSER1Q9C0I3 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
CCSER1Q9C0I3 AC090971.4-201ENST00000560291 1800 ntBASIC4.8□□□□□ -1.64
CCSER1Q9C0I3 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCSER1Q9C0I3 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
CCSER1Q9C0I3 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CCSER1Q9C0I3 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CCSER1Q9C0I3 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.8□□□□□ -1.64
CCSER1Q9C0I3 ASNSP1-201ENST00000518311 1939 ntBASIC4.8□□□□□ -1.64
CCSER1Q9C0I3 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.8□□□□□ -1.64
CCSER1Q9C0I3 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCSER1Q9C0I3 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CCSER1Q9C0I3 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
CCSER1Q9C0I3 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
CCSER1Q9C0I3 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CCSER1Q9C0I3 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.79□□□□□ -1.64
CCSER1Q9C0I3 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.79□□□□□ -1.64
CCSER1Q9C0I3 OR52B1P-201ENST00000316506 909 ntBASIC4.79□□□□□ -1.64
CCSER1Q9C0I3 RNU6-666P-201ENST00000363499 107 ntBASIC4.79□□□□□ -1.64
CCSER1Q9C0I3 RNA5SP509-201ENST00000364577 119 ntBASIC4.79□□□□□ -1.64
CCSER1Q9C0I3 LSM5-205ENST00000409952 687 ntTSL 4 BASIC4.79□□□□□ -1.64
CCSER1Q9C0I3 LSM5-206ENST00000409987 504 ntTSL 5 BASIC4.79□□□□□ -1.64
CCSER1Q9C0I3 RN7SKP235-201ENST00000410662 305 ntBASIC4.79□□□□□ -1.64
CCSER1Q9C0I3 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.79□□□□□ -1.64
CCSER1Q9C0I3 RPS20P1-201ENST00000434853 354 ntBASIC4.79□□□□□ -1.64
CCSER1Q9C0I3 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.79□□□□□ -1.64
CCSER1Q9C0I3 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.79□□□□□ -1.64
CCSER1Q9C0I3 MORF4L1P4-201ENST00000450245 976 ntBASIC4.79□□□□□ -1.64
CCSER1Q9C0I3 RPL7P32-201ENST00000457119 744 ntBASIC4.79□□□□□ -1.64
CCSER1Q9C0I3 RNU6-775P-201ENST00000459318 96 ntBASIC4.79□□□□□ -1.64
CCSER1Q9C0I3 NDUFA5P9-201ENST00000472609 340 ntBASIC4.79□□□□□ -1.64
CCSER1Q9C0I3 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CCSER1Q9C0I3 AC108471.1-201ENST00000513977 287 ntBASIC4.79□□□□□ -1.64
CCSER1Q9C0I3 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC4.79□□□□□ -1.64
CCSER1Q9C0I3 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.79□□□□□ -1.64
CCSER1Q9C0I3 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.79□□□□□ -1.64
CCSER1Q9C0I3 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.79□□□□□ -1.64
CCSER1Q9C0I3 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms