Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 RNY3P15-201ENST00000516297 97 ntBASIC6.61□□□□□ -1.35
CNTNAP3Q9BZ76 RNU6-885P-201ENST00000516607 104 ntBASIC6.61□□□□□ -1.35
CNTNAP3Q9BZ76 AC087854.1-201ENST00000519706 414 ntBASIC6.61□□□□□ -1.35
CNTNAP3Q9BZ76 IGKV2-18-201ENST00000522607 343 ntBASIC6.61□□□□□ -1.35
CNTNAP3Q9BZ76 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
CNTNAP3Q9BZ76 DEFB131D-201ENST00000526803 184 ntBASIC6.61□□□□□ -1.35
CNTNAP3Q9BZ76 AC022882.1-201ENST00000532142 501 ntBASIC6.61□□□□□ -1.35
CNTNAP3Q9BZ76 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CNTNAP3Q9BZ76 AC122688.2-201ENST00000543922 585 ntTSL 3 BASIC6.61□□□□□ -1.35
CNTNAP3Q9BZ76 APPL2-203ENST00000546731 684 ntTSL 2 BASIC6.61□□□□□ -1.35
CNTNAP3Q9BZ76 OR4T1P-201ENST00000554933 911 ntBASIC6.61□□□□□ -1.35
CNTNAP3Q9BZ76 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC6.61□□□□□ -1.35
CNTNAP3Q9BZ76 CYCSP2-201ENST00000558168 301 ntBASIC6.61□□□□□ -1.35
CNTNAP3Q9BZ76 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC6.61□□□□□ -1.35
CNTNAP3Q9BZ76 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC6.61□□□□□ -1.35
CNTNAP3Q9BZ76 MIR3691-201ENST00000578066 90 ntBASIC6.61□□□□□ -1.35
CNTNAP3Q9BZ76 MIR544B-201ENST00000582372 78 ntBASIC6.61□□□□□ -1.35
CNTNAP3Q9BZ76 AC233702.7-202ENST00000582941 211 ntBASIC6.61□□□□□ -1.35
CNTNAP3Q9BZ76 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC6.61□□□□□ -1.35
CNTNAP3Q9BZ76 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC6.61□□□□□ -1.35
CNTNAP3Q9BZ76 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC6.61□□□□□ -1.35
CNTNAP3Q9BZ76 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC6.61□□□□□ -1.35
CNTNAP3Q9BZ76 AC090525.3-201ENST00000605601 189 ntBASIC6.61□□□□□ -1.35
CNTNAP3Q9BZ76 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC6.61□□□□□ -1.35
CNTNAP3Q9BZ76 SERPINB8-208ENST00000542677 3192 ntTSL 2 BASIC6.61□□□□□ -1.35
CNTNAP3Q9BZ76 BMX-201ENST00000342014 2499 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CNTNAP3Q9BZ76 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC6.61□□□□□ -1.35
CNTNAP3Q9BZ76 LRRC31-201ENST00000264676 2355 ntAPPRIS ALT2 TSL 2 BASIC6.61□□□□□ -1.35
CNTNAP3Q9BZ76 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC6.61□□□□□ -1.35
CNTNAP3Q9BZ76 SEC31A-207ENST00000443462 4042 ntTSL 2 BASIC6.61□□□□□ -1.35
CNTNAP3Q9BZ76 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC6.61□□□□□ -1.35
CNTNAP3Q9BZ76 PPWD1-201ENST00000261308 2166 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CNTNAP3Q9BZ76 PPWD1-214ENST00000535264 2195 ntTSL 2 BASIC6.61□□□□□ -1.35
CNTNAP3Q9BZ76 MAP4K4-203ENST00000347699 3792 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CNTNAP3Q9BZ76 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CNTNAP3Q9BZ76 FOXP2-201ENST00000350908 2638 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
CNTNAP3Q9BZ76 P2RY14-201ENST00000309170 2513 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CNTNAP3Q9BZ76 UBE2V1-201ENST00000340309 2536 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CNTNAP3Q9BZ76 BRD8-204ENST00000411594 2967 ntTSL 5 BASIC6.6□□□□□ -1.35
CNTNAP3Q9BZ76 ASB4-202ENST00000325885 3825 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CNTNAP3Q9BZ76 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CNTNAP3Q9BZ76 CTAGE11P-201ENST00000451540 2353 ntBASIC6.6□□□□□ -1.35
CNTNAP3Q9BZ76 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC6.6□□□□□ -1.35
CNTNAP3Q9BZ76 UEVLD-205ENST00000396197 4156 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
CNTNAP3Q9BZ76 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CNTNAP3Q9BZ76 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
CNTNAP3Q9BZ76 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CNTNAP3Q9BZ76 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CNTNAP3Q9BZ76 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
CNTNAP3Q9BZ76 PSMD5-AS1-213ENST00000640327 3531 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CNTNAP3Q9BZ76 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC6.6□□□□□ -1.35
CNTNAP3Q9BZ76 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC6.6□□□□□ -1.35
CNTNAP3Q9BZ76 AL512646.1-201ENST00000269395 1077 ntBASIC6.6□□□□□ -1.35
CNTNAP3Q9BZ76 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CNTNAP3Q9BZ76 RNU6-774P-201ENST00000363238 107 ntBASIC6.6□□□□□ -1.35
CNTNAP3Q9BZ76 RNA5SP140-201ENST00000364524 92 ntBASIC6.6□□□□□ -1.35
CNTNAP3Q9BZ76 RNU6-456P-201ENST00000384493 107 ntBASIC6.6□□□□□ -1.35
CNTNAP3Q9BZ76 RPL31P52-201ENST00000407532 367 ntBASIC6.6□□□□□ -1.35
CNTNAP3Q9BZ76 Y_RNA.615-201ENST00000410769 117 ntBASIC6.6□□□□□ -1.35
CNTNAP3Q9BZ76 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC6.6□□□□□ -1.35
CNTNAP3Q9BZ76 RPEP2-201ENST00000432149 701 ntBASIC6.6□□□□□ -1.35
CNTNAP3Q9BZ76 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC6.6□□□□□ -1.35
CNTNAP3Q9BZ76 AC092106.2-201ENST00000436597 487 ntBASIC6.6□□□□□ -1.35
CNTNAP3Q9BZ76 FABP5P14-201ENST00000437273 393 ntBASIC6.6□□□□□ -1.35
CNTNAP3Q9BZ76 GAPDHP58-201ENST00000438477 1006 ntBASIC6.6□□□□□ -1.35
CNTNAP3Q9BZ76 BNIP3P2-201ENST00000441221 577 ntBASIC6.6□□□□□ -1.35
CNTNAP3Q9BZ76 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC6.6□□□□□ -1.35
CNTNAP3Q9BZ76 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC6.6□□□□□ -1.35
CNTNAP3Q9BZ76 RPL5P30-201ENST00000465511 891 ntBASIC6.6□□□□□ -1.35
CNTNAP3Q9BZ76 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC6.6□□□□□ -1.35
CNTNAP3Q9BZ76 AC015911.1-201ENST00000495111 156 ntBASIC6.6□□□□□ -1.35
CNTNAP3Q9BZ76 SCG5-207ENST00000497208 949 ntTSL 5 BASIC6.6□□□□□ -1.35
CNTNAP3Q9BZ76 AC090638.1-201ENST00000498296 909 ntBASIC6.6□□□□□ -1.35
CNTNAP3Q9BZ76 SSX6-203ENST00000509958 336 ntTSL 3 BASIC6.6□□□□□ -1.35
CNTNAP3Q9BZ76 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC6.6□□□□□ -1.35
CNTNAP3Q9BZ76 AP003181.2-201ENST00000528941 181 ntBASIC6.6□□□□□ -1.35
CNTNAP3Q9BZ76 NUDT7-206ENST00000568787 678 ntTSL 2 BASIC6.6□□□□□ -1.35
CNTNAP3Q9BZ76 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CNTNAP3Q9BZ76 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC6.6□□□□□ -1.35
CNTNAP3Q9BZ76 AC113195.1-201ENST00000579952 141 ntBASIC6.6□□□□□ -1.35
CNTNAP3Q9BZ76 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC6.6□□□□□ -1.35
CNTNAP3Q9BZ76 AC104687.2-201ENST00000604442 342 ntBASIC6.6□□□□□ -1.35
CNTNAP3Q9BZ76 AL009031.1-201ENST00000632346 1026 ntTSL 2 BASIC6.6□□□□□ -1.35
CNTNAP3Q9BZ76 AC129915.3-201ENST00000634128 948 ntBASIC6.6□□□□□ -1.35
CNTNAP3Q9BZ76 OR2L1P-202ENST00000641567 1023 ntBASIC6.6□□□□□ -1.35
CNTNAP3Q9BZ76 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CNTNAP3Q9BZ76 CR1-203ENST00000367051 7469 ntTSL 5 BASIC6.6□□□□□ -1.35
CNTNAP3Q9BZ76 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CNTNAP3Q9BZ76 AC068860.1-201ENST00000623701 3736 ntBASIC6.6□□□□□ -1.35
CNTNAP3Q9BZ76 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
CNTNAP3Q9BZ76 ETV1-201ENST00000242066 6348 ntTSL 5 BASIC6.6□□□□□ -1.35
CNTNAP3Q9BZ76 AL022163.1-201ENST00000430261 1569 ntBASIC6.6□□□□□ -1.35
CNTNAP3Q9BZ76 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CNTNAP3Q9BZ76 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
CNTNAP3Q9BZ76 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CNTNAP3Q9BZ76 VTCN1-201ENST00000328189 2289 ntTSL 5 BASIC6.6□□□□□ -1.35
CNTNAP3Q9BZ76 GTF2E1-201ENST00000283875 3012 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CNTNAP3Q9BZ76 AC108676.1-201ENST00000455557 2969 ntTSL 2 BASIC6.6□□□□□ -1.35
CNTNAP3Q9BZ76 LINC01091-204ENST00000515769 2204 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CNTNAP3Q9BZ76 PLS3-202ENST00000355899 3280 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms