Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC6.13□□□□□ -1.43
SCAPERQ9BY12 NPM1P38-201ENST00000403835 865 ntBASIC6.13□□□□□ -1.43
SCAPERQ9BY12 NDUFB4P4-201ENST00000404822 243 ntBASIC6.13□□□□□ -1.43
SCAPERQ9BY12 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC6.13□□□□□ -1.43
SCAPERQ9BY12 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SCAPERQ9BY12 RPL36AP13-201ENST00000457490 317 ntBASIC6.13□□□□□ -1.43
SCAPERQ9BY12 AC022795.1-201ENST00000473808 480 ntBASIC6.13□□□□□ -1.43
SCAPERQ9BY12 AC090013.1-201ENST00000485147 480 ntBASIC6.13□□□□□ -1.43
SCAPERQ9BY12 AC108145.1-201ENST00000503770 153 ntBASIC6.13□□□□□ -1.43
SCAPERQ9BY12 AC074250.1-201ENST00000511117 192 ntBASIC6.13□□□□□ -1.43
SCAPERQ9BY12 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC6.13□□□□□ -1.43
SCAPERQ9BY12 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC6.13□□□□□ -1.43
SCAPERQ9BY12 AL049634.3-201ENST00000604968 457 ntBASIC6.13□□□□□ -1.43
SCAPERQ9BY12 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC6.13□□□□□ -1.43
SCAPERQ9BY12 AC005086.4-201ENST00000623065 213 ntBASIC6.13□□□□□ -1.43
SCAPERQ9BY12 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC6.13□□□□□ -1.43
SCAPERQ9BY12 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SCAPERQ9BY12 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SCAPERQ9BY12 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
SCAPERQ9BY12 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SCAPERQ9BY12 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC6.13□□□□□ -1.43
SCAPERQ9BY12 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC6.13□□□□□ -1.43
SCAPERQ9BY12 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SCAPERQ9BY12 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC6.12□□□□□ -1.43
SCAPERQ9BY12 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SCAPERQ9BY12 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SCAPERQ9BY12 CYCSP10-201ENST00000417973 294 ntBASIC6.12□□□□□ -1.43
SCAPERQ9BY12 DNAJA1P1-201ENST00000425106 1187 ntBASIC6.12□□□□□ -1.43
SCAPERQ9BY12 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC6.12□□□□□ -1.43
SCAPERQ9BY12 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC6.12□□□□□ -1.43
SCAPERQ9BY12 TBCA-203ENST00000517679 545 ntTSL 3 BASIC6.12□□□□□ -1.43
SCAPERQ9BY12 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC6.12□□□□□ -1.43
SCAPERQ9BY12 AL391497.1-201ENST00000608671 547 ntBASIC6.12□□□□□ -1.43
SCAPERQ9BY12 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC6.12□□□□□ -1.43
SCAPERQ9BY12 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC6.12□□□□□ -1.43
SCAPERQ9BY12 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC6.12□□□□□ -1.43
SCAPERQ9BY12 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC6.12□□□□□ -1.43
SCAPERQ9BY12 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
SCAPERQ9BY12 RNA5SP72-201ENST00000364442 117 ntBASIC6.11□□□□□ -1.43
SCAPERQ9BY12 MIR218-2-201ENST00000385006 110 ntBASIC6.11□□□□□ -1.43
SCAPERQ9BY12 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC6.11□□□□□ -1.43
SCAPERQ9BY12 UBTFL3-201ENST00000418934 1024 ntBASIC6.11□□□□□ -1.43
SCAPERQ9BY12 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC6.11□□□□□ -1.43
SCAPERQ9BY12 UBTFL6-201ENST00000477929 1024 ntBASIC6.11□□□□□ -1.43
SCAPERQ9BY12 CAB39P1-201ENST00000502277 460 ntBASIC6.11□□□□□ -1.43
SCAPERQ9BY12 UBE2CP3-201ENST00000502715 450 ntBASIC6.11□□□□□ -1.43
SCAPERQ9BY12 CDH12P2-201ENST00000504393 298 ntBASIC6.11□□□□□ -1.43
SCAPERQ9BY12 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC6.11□□□□□ -1.43
SCAPERQ9BY12 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC6.11□□□□□ -1.43
SCAPERQ9BY12 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC6.11□□□□□ -1.43
SCAPERQ9BY12 AC027176.2-201ENST00000559166 746 ntBASIC6.11□□□□□ -1.43
SCAPERQ9BY12 MIR4433B-201ENST00000581329 102 ntBASIC6.11□□□□□ -1.43
SCAPERQ9BY12 AC005344.1-201ENST00000613391 459 ntBASIC6.11□□□□□ -1.43
SCAPERQ9BY12 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC6.11□□□□□ -1.43
SCAPERQ9BY12 CASC19-204ENST00000641001 2055 ntBASIC6.11□□□□□ -1.43
SCAPERQ9BY12 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC6.1□□□□□ -1.43
SCAPERQ9BY12 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
SCAPERQ9BY12 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SCAPERQ9BY12 IL6-203ENST00000401651 539 ntTSL 2 BASIC6.1□□□□□ -1.43
SCAPERQ9BY12 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC6.1□□□□□ -1.43
SCAPERQ9BY12 PPIAP3-201ENST00000450588 505 ntBASIC6.1□□□□□ -1.43
SCAPERQ9BY12 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC6.1□□□□□ -1.43
SCAPERQ9BY12 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC6.1□□□□□ -1.43
SCAPERQ9BY12 AC091516.1-201ENST00000549191 703 ntBASIC6.1□□□□□ -1.43
SCAPERQ9BY12 AC037471.2-201ENST00000564941 598 ntBASIC6.1□□□□□ -1.43
SCAPERQ9BY12 MIR3922-201ENST00000585192 84 ntBASIC6.1□□□□□ -1.43
SCAPERQ9BY12 MIR7975-201ENST00000619350 68 ntBASIC6.1□□□□□ -1.43
SCAPERQ9BY12 AC019278.1-201ENST00000623516 479 ntBASIC6.1□□□□□ -1.43
SCAPERQ9BY12 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC6.1□□□□□ -1.43
SCAPERQ9BY12 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SCAPERQ9BY12 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC6.1□□□□□ -1.43
SCAPERQ9BY12 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC6.1□□□□□ -1.43
SCAPERQ9BY12 AC083843.2-201ENST00000568248 6253 ntBASIC6.1□□□□□ -1.43
SCAPERQ9BY12 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
SCAPERQ9BY12 AC019072.1-201ENST00000604535 1551 ntBASIC6.1□□□□□ -1.43
SCAPERQ9BY12 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SCAPERQ9BY12 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC6.1□□□□□ -1.43
SCAPERQ9BY12 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
SCAPERQ9BY12 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
SCAPERQ9BY12 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SCAPERQ9BY12 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
SCAPERQ9BY12 U1.1-201ENST00000384101 164 ntBASIC6.09□□□□□ -1.43
SCAPERQ9BY12 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SCAPERQ9BY12 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC6.09□□□□□ -1.43
SCAPERQ9BY12 AC092647.1-201ENST00000420654 287 ntBASIC6.09□□□□□ -1.43
SCAPERQ9BY12 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC6.09□□□□□ -1.43
SCAPERQ9BY12 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC6.09□□□□□ -1.43
SCAPERQ9BY12 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC6.09□□□□□ -1.43
SCAPERQ9BY12 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC6.09□□□□□ -1.43
SCAPERQ9BY12 AC092691.2-201ENST00000461787 803 ntBASIC6.09□□□□□ -1.43
SCAPERQ9BY12 RPS26P28-201ENST00000470806 348 ntBASIC6.09□□□□□ -1.43
SCAPERQ9BY12 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC6.09□□□□□ -1.43
SCAPERQ9BY12 AC108022.1-201ENST00000493466 478 ntBASIC6.09□□□□□ -1.43
SCAPERQ9BY12 RPL29P14-201ENST00000495837 428 ntBASIC6.09□□□□□ -1.43
SCAPERQ9BY12 HMGN1P15-201ENST00000513870 295 ntBASIC6.09□□□□□ -1.43
SCAPERQ9BY12 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC6.09□□□□□ -1.43
SCAPERQ9BY12 CYCSP28-201ENST00000534284 321 ntBASIC6.09□□□□□ -1.43
SCAPERQ9BY12 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
SCAPERQ9BY12 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC6.09□□□□□ -1.43
SCAPERQ9BY12 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms