Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 CGA-206ENST00000630630 832 ntTSL 2 BASIC4.92□□□□□ -1.62
SNX18Q96RF0 MIR4278-201ENST00000636094 69 ntBASIC4.92□□□□□ -1.62
SNX18Q96RF0 AL596275.2-204ENST00000641628 552 ntBASIC4.92□□□□□ -1.62
SNX18Q96RF0 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
SNX18Q96RF0 AL596275.2-206ENST00000641957 626 ntBASIC4.92□□□□□ -1.62
SNX18Q96RF0 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SNX18Q96RF0 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.92□□□□□ -1.62
SNX18Q96RF0 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.92□□□□□ -1.62
SNX18Q96RF0 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
SNX18Q96RF0 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SNX18Q96RF0 MTND4P31-201ENST00000425607 1343 ntBASIC4.92□□□□□ -1.62
SNX18Q96RF0 OR13C1P-202ENST00000641378 2919 ntBASIC4.92□□□□□ -1.62
SNX18Q96RF0 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
SNX18Q96RF0 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.92□□□□□ -1.62
SNX18Q96RF0 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
SNX18Q96RF0 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SNX18Q96RF0 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
SNX18Q96RF0 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SNX18Q96RF0 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SNX18Q96RF0 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC4.91□□□□□ -1.62
SNX18Q96RF0 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.91□□□□□ -1.62
SNX18Q96RF0 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SNX18Q96RF0 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SNX18Q96RF0 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
SNX18Q96RF0 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SNX18Q96RF0 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
SNX18Q96RF0 AP001273.1-201ENST00000624493 3152 ntBASIC4.91□□□□□ -1.62
SNX18Q96RF0 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SNX18Q96RF0 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SNX18Q96RF0 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SNX18Q96RF0 OR56B2P-201ENST00000317102 954 ntBASIC4.91□□□□□ -1.62
SNX18Q96RF0 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC4.91□□□□□ -1.62
SNX18Q96RF0 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
SNX18Q96RF0 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC4.91□□□□□ -1.62
SNX18Q96RF0 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
SNX18Q96RF0 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC4.91□□□□□ -1.62
SNX18Q96RF0 NUDT19P3-201ENST00000404698 555 ntBASIC4.91□□□□□ -1.62
SNX18Q96RF0 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.91□□□□□ -1.62
SNX18Q96RF0 AC093155.2-201ENST00000420734 937 ntBASIC4.91□□□□□ -1.62
SNX18Q96RF0 AL358176.3-201ENST00000420757 454 ntBASIC4.91□□□□□ -1.62
SNX18Q96RF0 AC007435.1-201ENST00000421086 415 ntBASIC4.91□□□□□ -1.62
SNX18Q96RF0 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC4.91□□□□□ -1.62
SNX18Q96RF0 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC4.91□□□□□ -1.62
SNX18Q96RF0 USP9YP14-201ENST00000430663 563 ntBASIC4.91□□□□□ -1.62
SNX18Q96RF0 AC002504.1-201ENST00000438281 691 ntBASIC4.91□□□□□ -1.62
SNX18Q96RF0 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC4.91□□□□□ -1.62
SNX18Q96RF0 AL591503.2-201ENST00000442314 1005 ntBASIC4.91□□□□□ -1.62
SNX18Q96RF0 MTCYBP3-201ENST00000445588 1137 ntBASIC4.91□□□□□ -1.62
SNX18Q96RF0 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC4.91□□□□□ -1.62
SNX18Q96RF0 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SNX18Q96RF0 ELOCP30-201ENST00000447108 299 ntBASIC4.91□□□□□ -1.62
SNX18Q96RF0 BX248409.1-201ENST00000455497 255 ntBASIC4.91□□□□□ -1.62
SNX18Q96RF0 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC4.91□□□□□ -1.62
SNX18Q96RF0 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC4.91□□□□□ -1.62
SNX18Q96RF0 GAPDHP36-201ENST00000480688 918 ntBASIC4.91□□□□□ -1.62
SNX18Q96RF0 GAPDHP39-201ENST00000481866 979 ntBASIC4.91□□□□□ -1.62
SNX18Q96RF0 RN7SL629P-201ENST00000489622 285 ntBASIC4.91□□□□□ -1.62
SNX18Q96RF0 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SNX18Q96RF0 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SNX18Q96RF0 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC4.91□□□□□ -1.62
SNX18Q96RF0 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC4.91□□□□□ -1.62
SNX18Q96RF0 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.91□□□□□ -1.62
SNX18Q96RF0 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC4.91□□□□□ -1.62
SNX18Q96RF0 BNIP3P1-201ENST00000547295 580 ntBASIC4.91□□□□□ -1.62
SNX18Q96RF0 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC4.91□□□□□ -1.62
SNX18Q96RF0 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC4.91□□□□□ -1.62
SNX18Q96RF0 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC4.91□□□□□ -1.62
SNX18Q96RF0 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.91□□□□□ -1.62
SNX18Q96RF0 AC079171.1-201ENST00000568788 914 ntBASIC4.91□□□□□ -1.62
SNX18Q96RF0 MIR4999-201ENST00000585029 91 ntBASIC4.91□□□□□ -1.62
SNX18Q96RF0 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC4.91□□□□□ -1.62
SNX18Q96RF0 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC4.91□□□□□ -1.62
SNX18Q96RF0 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC4.91□□□□□ -1.62
SNX18Q96RF0 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC4.91□□□□□ -1.62
SNX18Q96RF0 VN1R90P-201ENST00000595717 726 ntBASIC4.91□□□□□ -1.62
SNX18Q96RF0 GMFG-212ENST00000602185 423 ntTSL 3 BASIC4.91□□□□□ -1.62
SNX18Q96RF0 CLPTM1LP1-201ENST00000604519 484 ntBASIC4.91□□□□□ -1.62
SNX18Q96RF0 AC064872.1-201ENST00000604823 1072 ntBASIC4.91□□□□□ -1.62
SNX18Q96RF0 AL353600.1-201ENST00000608148 251 ntBASIC4.91□□□□□ -1.62
SNX18Q96RF0 AC073114.1-201ENST00000612027 490 ntBASIC4.91□□□□□ -1.62
SNX18Q96RF0 RBM12B-AS1-201ENST00000623283 653 ntBASIC4.91□□□□□ -1.62
SNX18Q96RF0 AL691477.1-201ENST00000624398 162 ntBASIC4.91□□□□□ -1.62
SNX18Q96RF0 AC073869.8-201ENST00000641806 335 ntBASIC4.91□□□□□ -1.62
SNX18Q96RF0 AC073869.10-201ENST00000642016 354 ntBASIC4.91□□□□□ -1.62
SNX18Q96RF0 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
SNX18Q96RF0 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC4.91□□□□□ -1.62
SNX18Q96RF0 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SNX18Q96RF0 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SNX18Q96RF0 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.91□□□□□ -1.62
SNX18Q96RF0 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
SNX18Q96RF0 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
SNX18Q96RF0 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC4.91□□□□□ -1.62
SNX18Q96RF0 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
SNX18Q96RF0 DDX18P4-201ENST00000511690 1966 ntBASIC4.91□□□□□ -1.62
SNX18Q96RF0 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.91□□□□□ -1.62
SNX18Q96RF0 ECM1P2-201ENST00000503354 1577 ntBASIC4.91□□□□□ -1.62
SNX18Q96RF0 MTND4P4-201ENST00000439033 1366 ntBASIC4.91□□□□□ -1.62
SNX18Q96RF0 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC4.9□□□□□ -1.62
SNX18Q96RF0 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
SNX18Q96RF0 AL034549.2-201ENST00000618285 3373 ntBASIC4.9□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms