Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 AL512430.2-201ENST00000406786 339 ntBASIC4.05□□□□□ -1.76
COL21A1Q96P44 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC4.05□□□□□ -1.76
COL21A1Q96P44 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC4.05□□□□□ -1.76
COL21A1Q96P44 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.05□□□□□ -1.76
COL21A1Q96P44 AL132765.1-201ENST00000434165 553 ntBASIC4.05□□□□□ -1.76
COL21A1Q96P44 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.05□□□□□ -1.76
COL21A1Q96P44 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
COL21A1Q96P44 CALM1P2-201ENST00000452941 448 ntBASIC4.05□□□□□ -1.76
COL21A1Q96P44 RPL7P32-201ENST00000457119 744 ntBASIC4.05□□□□□ -1.76
COL21A1Q96P44 RPL23AP24-201ENST00000458203 385 ntBASIC4.05□□□□□ -1.76
COL21A1Q96P44 AC091153.1-201ENST00000466297 402 ntBASIC4.05□□□□□ -1.76
COL21A1Q96P44 RPS26P15-201ENST00000488067 348 ntBASIC4.05□□□□□ -1.76
COL21A1Q96P44 UBA52P3-201ENST00000491303 382 ntBASIC4.05□□□□□ -1.76
COL21A1Q96P44 AC147055.1-201ENST00000509261 750 ntBASIC4.05□□□□□ -1.76
COL21A1Q96P44 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.05□□□□□ -1.76
COL21A1Q96P44 RAB9BP1-201ENST00000519581 626 ntBASIC4.05□□□□□ -1.76
COL21A1Q96P44 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.05□□□□□ -1.76
COL21A1Q96P44 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC4.05□□□□□ -1.76
COL21A1Q96P44 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.05□□□□□ -1.76
COL21A1Q96P44 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.05□□□□□ -1.76
COL21A1Q96P44 AC087888.1-201ENST00000550884 1254 ntBASIC4.05□□□□□ -1.76
COL21A1Q96P44 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.05□□□□□ -1.76
COL21A1Q96P44 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC4.05□□□□□ -1.76
COL21A1Q96P44 GMCL1P2-201ENST00000605230 823 ntBASIC4.05□□□□□ -1.76
COL21A1Q96P44 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC4.05□□□□□ -1.76
COL21A1Q96P44 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
COL21A1Q96P44 uc_338.13-201ENST00000618243 179 ntBASIC4.05□□□□□ -1.76
COL21A1Q96P44 MIR7641-1-201ENST00000627518 61 ntBASIC4.05□□□□□ -1.76
COL21A1Q96P44 FP325313.1-201ENST00000638228 703 ntBASIC4.05□□□□□ -1.76
COL21A1Q96P44 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.05□□□□□ -1.76
COL21A1Q96P44 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.05□□□□□ -1.76
COL21A1Q96P44 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
COL21A1Q96P44 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
COL21A1Q96P44 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
COL21A1Q96P44 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
COL21A1Q96P44 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
COL21A1Q96P44 AC090017.1-201ENST00000548612 1779 ntBASIC4.04□□□□□ -1.76
COL21A1Q96P44 AL356489.2-201ENST00000566968 3528 ntBASIC4.04□□□□□ -1.76
COL21A1Q96P44 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.04□□□□□ -1.76
COL21A1Q96P44 AC092079.1-201ENST00000558620 1985 ntBASIC4.04□□□□□ -1.76
COL21A1Q96P44 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.04□□□□□ -1.76
COL21A1Q96P44 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
COL21A1Q96P44 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
COL21A1Q96P44 SNORD66.1-201ENST00000391230 76 ntBASIC4.04□□□□□ -1.76
COL21A1Q96P44 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
COL21A1Q96P44 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.04□□□□□ -1.76
COL21A1Q96P44 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.04□□□□□ -1.76
COL21A1Q96P44 AJ239321.1-201ENST00000424255 564 ntBASIC4.04□□□□□ -1.76
COL21A1Q96P44 AC091390.1-201ENST00000433904 331 ntBASIC4.04□□□□□ -1.76
COL21A1Q96P44 BUD31P2-201ENST00000449374 300 ntBASIC4.04□□□□□ -1.76
COL21A1Q96P44 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.04□□□□□ -1.76
COL21A1Q96P44 RN7SL98P-201ENST00000462271 300 ntBASIC4.04□□□□□ -1.76
COL21A1Q96P44 RPL35AP15-201ENST00000468042 339 ntBASIC4.04□□□□□ -1.76
COL21A1Q96P44 RPL23AP2-201ENST00000471227 466 ntBASIC4.04□□□□□ -1.76
COL21A1Q96P44 SYT14P1-201ENST00000481459 721 ntBASIC4.04□□□□□ -1.76
COL21A1Q96P44 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC4.04□□□□□ -1.76
COL21A1Q96P44 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.04□□□□□ -1.76
COL21A1Q96P44 AC017037.1-201ENST00000508460 471 ntBASIC4.04□□□□□ -1.76
COL21A1Q96P44 PRELID3BP5-201ENST00000508612 460 ntBASIC4.04□□□□□ -1.76
COL21A1Q96P44 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC4.04□□□□□ -1.76
COL21A1Q96P44 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC4.04□□□□□ -1.76
COL21A1Q96P44 AC068790.5-201ENST00000602741 355 ntBASIC4.04□□□□□ -1.76
COL21A1Q96P44 AL356274.1-201ENST00000617064 410 ntBASIC4.04□□□□□ -1.76
COL21A1Q96P44 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC4.04□□□□□ -1.76
COL21A1Q96P44 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.04□□□□□ -1.76
COL21A1Q96P44 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
COL21A1Q96P44 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.04□□□□□ -1.76
COL21A1Q96P44 AC093535.2-201ENST00000624769 2326 ntBASIC4.04□□□□□ -1.76
COL21A1Q96P44 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
COL21A1Q96P44 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
COL21A1Q96P44 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
COL21A1Q96P44 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
COL21A1Q96P44 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.03□□□□□ -1.76
COL21A1Q96P44 MIR331-201ENST00000362302 94 ntBASIC4.03□□□□□ -1.76
COL21A1Q96P44 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.03□□□□□ -1.76
COL21A1Q96P44 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
COL21A1Q96P44 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
COL21A1Q96P44 AC097374.1-203ENST00000400783 485 ntBASIC4.03□□□□□ -1.76
COL21A1Q96P44 SNORA11F-201ENST00000408237 128 ntBASIC4.03□□□□□ -1.76
COL21A1Q96P44 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.03□□□□□ -1.76
COL21A1Q96P44 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.03□□□□□ -1.76
COL21A1Q96P44 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.03□□□□□ -1.76
COL21A1Q96P44 MTCYBP7-201ENST00000419540 1134 ntBASIC4.03□□□□□ -1.76
COL21A1Q96P44 AL355994.1-201ENST00000424379 260 ntBASIC4.03□□□□□ -1.76
COL21A1Q96P44 RPL12P34-201ENST00000424532 479 ntBASIC4.03□□□□□ -1.76
COL21A1Q96P44 AC022022.1-201ENST00000430304 178 ntBASIC4.03□□□□□ -1.76
COL21A1Q96P44 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
COL21A1Q96P44 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.03□□□□□ -1.76
COL21A1Q96P44 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
COL21A1Q96P44 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC4.03□□□□□ -1.76
COL21A1Q96P44 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.03□□□□□ -1.76
COL21A1Q96P44 ARL5AP3-201ENST00000439327 386 ntBASIC4.03□□□□□ -1.76
COL21A1Q96P44 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.03□□□□□ -1.76
COL21A1Q96P44 AC099063.2-201ENST00000446360 662 ntBASIC4.03□□□□□ -1.76
COL21A1Q96P44 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC4.03□□□□□ -1.76
COL21A1Q96P44 RPL7P22-201ENST00000466005 733 ntBASIC4.03□□□□□ -1.76
COL21A1Q96P44 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC4.03□□□□□ -1.76
COL21A1Q96P44 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.03□□□□□ -1.76
COL21A1Q96P44 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.03□□□□□ -1.76
COL21A1Q96P44 AC093840.1-201ENST00000511599 336 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms