Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.27□□□□□ -1.73
ECHDC3Q96DC8 AC018552.3-201ENST00000567416 561 ntBASIC4.27□□□□□ -1.73
ECHDC3Q96DC8 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
ECHDC3Q96DC8 AC011477.5-201ENST00000586571 259 ntBASIC4.27□□□□□ -1.73
ECHDC3Q96DC8 AC026979.4-201ENST00000606555 645 ntBASIC4.27□□□□□ -1.73
ECHDC3Q96DC8 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.27□□□□□ -1.73
ECHDC3Q96DC8 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.27□□□□□ -1.73
ECHDC3Q96DC8 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
ECHDC3Q96DC8 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.27□□□□□ -1.73
ECHDC3Q96DC8 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
ECHDC3Q96DC8 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
ECHDC3Q96DC8 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
ECHDC3Q96DC8 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
ECHDC3Q96DC8 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
ECHDC3Q96DC8 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
ECHDC3Q96DC8 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
ECHDC3Q96DC8 HDGFP1-201ENST00000405943 252 ntBASIC4.26□□□□□ -1.73
ECHDC3Q96DC8 AMZ2P2-201ENST00000406819 1057 ntBASIC4.26□□□□□ -1.73
ECHDC3Q96DC8 RN7SKP182-201ENST00000410772 298 ntBASIC4.26□□□□□ -1.73
ECHDC3Q96DC8 TRIM60P17-201ENST00000415181 719 ntBASIC4.26□□□□□ -1.73
ECHDC3Q96DC8 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
ECHDC3Q96DC8 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.26□□□□□ -1.73
ECHDC3Q96DC8 GTF2IP2-201ENST00000424290 697 ntBASIC4.26□□□□□ -1.73
ECHDC3Q96DC8 COX6CP15-201ENST00000426313 211 ntBASIC4.26□□□□□ -1.73
ECHDC3Q96DC8 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.26□□□□□ -1.73
ECHDC3Q96DC8 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC4.26□□□□□ -1.73
ECHDC3Q96DC8 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
ECHDC3Q96DC8 RNA5SP246-201ENST00000458909 119 ntBASIC4.26□□□□□ -1.73
ECHDC3Q96DC8 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC4.26□□□□□ -1.73
ECHDC3Q96DC8 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.26□□□□□ -1.73
ECHDC3Q96DC8 RPS27AP13-201ENST00000498403 237 ntBASIC4.26□□□□□ -1.73
ECHDC3Q96DC8 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
ECHDC3Q96DC8 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.26□□□□□ -1.73
ECHDC3Q96DC8 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.26□□□□□ -1.73
ECHDC3Q96DC8 MRPL49P2-201ENST00000521066 465 ntBASIC4.26□□□□□ -1.73
ECHDC3Q96DC8 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC4.26□□□□□ -1.73
ECHDC3Q96DC8 AC090819.1-201ENST00000523800 1111 ntBASIC4.26□□□□□ -1.73
ECHDC3Q96DC8 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC4.26□□□□□ -1.73
ECHDC3Q96DC8 TVP23BP1-201ENST00000557500 617 ntBASIC4.26□□□□□ -1.73
ECHDC3Q96DC8 MIR4697-201ENST00000582977 78 ntBASIC4.26□□□□□ -1.73
ECHDC3Q96DC8 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.26□□□□□ -1.73
ECHDC3Q96DC8 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.26□□□□□ -1.73
ECHDC3Q96DC8 ARF4P1-201ENST00000605447 541 ntBASIC4.26□□□□□ -1.73
ECHDC3Q96DC8 AC034236.3-201ENST00000605999 461 ntBASIC4.26□□□□□ -1.73
ECHDC3Q96DC8 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
ECHDC3Q96DC8 AC116447.1-201ENST00000613153 453 ntBASIC4.26□□□□□ -1.73
ECHDC3Q96DC8 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.26□□□□□ -1.73
ECHDC3Q96DC8 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.26□□□□□ -1.73
ECHDC3Q96DC8 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.26□□□□□ -1.73
ECHDC3Q96DC8 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
ECHDC3Q96DC8 AL451142.2-201ENST00000429076 2090 ntBASIC4.26□□□□□ -1.73
ECHDC3Q96DC8 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
ECHDC3Q96DC8 AC005261.4-201ENST00000600047 1385 ntBASIC4.26□□□□□ -1.73
ECHDC3Q96DC8 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
ECHDC3Q96DC8 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
ECHDC3Q96DC8 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
ECHDC3Q96DC8 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
ECHDC3Q96DC8 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
ECHDC3Q96DC8 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
ECHDC3Q96DC8 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC4.25□□□□□ -1.73
ECHDC3Q96DC8 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.25□□□□□ -1.73
ECHDC3Q96DC8 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
ECHDC3Q96DC8 RPS27AP11-201ENST00000402798 447 ntBASIC4.25□□□□□ -1.73
ECHDC3Q96DC8 VN1R8P-201ENST00000407739 893 ntBASIC4.25□□□□□ -1.73
ECHDC3Q96DC8 MIR1179-201ENST00000408703 91 ntBASIC4.25□□□□□ -1.73
ECHDC3Q96DC8 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
ECHDC3Q96DC8 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
ECHDC3Q96DC8 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.25□□□□□ -1.73
ECHDC3Q96DC8 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.25□□□□□ -1.73
ECHDC3Q96DC8 ELOCP10-201ENST00000440624 327 ntBASIC4.25□□□□□ -1.73
ECHDC3Q96DC8 CCRL1P1-201ENST00000449542 1053 ntBASIC4.25□□□□□ -1.73
ECHDC3Q96DC8 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC4.25□□□□□ -1.73
ECHDC3Q96DC8 FGF7P3-201ENST00000454645 303 ntBASIC4.25□□□□□ -1.73
ECHDC3Q96DC8 AC108145.1-201ENST00000503770 153 ntBASIC4.25□□□□□ -1.73
ECHDC3Q96DC8 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
ECHDC3Q96DC8 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC4.25□□□□□ -1.73
ECHDC3Q96DC8 RNU6-319P-201ENST00000516025 108 ntBASIC4.25□□□□□ -1.73
ECHDC3Q96DC8 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
ECHDC3Q96DC8 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
ECHDC3Q96DC8 AC084033.1-201ENST00000550830 633 ntBASIC4.25□□□□□ -1.73
ECHDC3Q96DC8 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.25□□□□□ -1.73
ECHDC3Q96DC8 PARP1P2-201ENST00000556806 195 ntBASIC4.25□□□□□ -1.73
ECHDC3Q96DC8 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC4.25□□□□□ -1.73
ECHDC3Q96DC8 RN7SL176P-201ENST00000580352 264 ntBASIC4.25□□□□□ -1.73
ECHDC3Q96DC8 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC4.25□□□□□ -1.73
ECHDC3Q96DC8 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
ECHDC3Q96DC8 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.25□□□□□ -1.73
ECHDC3Q96DC8 ELOCP34-201ENST00000604436 327 ntBASIC4.25□□□□□ -1.73
ECHDC3Q96DC8 AC009237.17-201ENST00000618111 748 ntBASIC4.25□□□□□ -1.73
ECHDC3Q96DC8 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.25□□□□□ -1.73
ECHDC3Q96DC8 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.25□□□□□ -1.73
ECHDC3Q96DC8 OR51C1P-202ENST00000641159 1444 ntBASIC4.25□□□□□ -1.73
ECHDC3Q96DC8 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
ECHDC3Q96DC8 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
ECHDC3Q96DC8 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.25□□□□□ -1.73
ECHDC3Q96DC8 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
ECHDC3Q96DC8 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
ECHDC3Q96DC8 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.25□□□□□ -1.73
ECHDC3Q96DC8 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.24□□□□□ -1.73
ECHDC3Q96DC8 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 124.3 ms