Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CTHRC1Q96CG8 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CTHRC1Q96CG8 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CTHRC1Q96CG8 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC4.88□□□□□ -1.63
CTHRC1Q96CG8 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC4.88□□□□□ -1.63
CTHRC1Q96CG8 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC4.88□□□□□ -1.63
CTHRC1Q96CG8 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
CTHRC1Q96CG8 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CTHRC1Q96CG8 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CTHRC1Q96CG8 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CTHRC1Q96CG8 FHIT-201ENST00000341848 174 ntTSL 3 BASIC4.88□□□□□ -1.63
CTHRC1Q96CG8 Y_RNA.77-201ENST00000362962 107 ntBASIC4.88□□□□□ -1.63
CTHRC1Q96CG8 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CTHRC1Q96CG8 RNU6-1200P-201ENST00000384162 107 ntBASIC4.88□□□□□ -1.63
CTHRC1Q96CG8 SNORA5.1-201ENST00000384275 131 ntBASIC4.88□□□□□ -1.63
CTHRC1Q96CG8 RPS3AP26-201ENST00000398259 784 ntBASIC4.88□□□□□ -1.63
CTHRC1Q96CG8 AL021407.1-201ENST00000404531 386 ntBASIC4.88□□□□□ -1.63
CTHRC1Q96CG8 TRBV24OR9-2-201ENST00000416632 435 ntBASIC4.88□□□□□ -1.63
CTHRC1Q96CG8 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC4.88□□□□□ -1.63
CTHRC1Q96CG8 AC019178.2-201ENST00000423595 505 ntBASIC4.88□□□□□ -1.63
CTHRC1Q96CG8 EI24P4-201ENST00000423683 1078 ntBASIC4.88□□□□□ -1.63
CTHRC1Q96CG8 RPL7P44-201ENST00000424827 742 ntBASIC4.88□□□□□ -1.63
CTHRC1Q96CG8 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC4.88□□□□□ -1.63
CTHRC1Q96CG8 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.88□□□□□ -1.63
CTHRC1Q96CG8 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC4.88□□□□□ -1.63
CTHRC1Q96CG8 BLOC1S2P1-201ENST00000428431 301 ntBASIC4.88□□□□□ -1.63
CTHRC1Q96CG8 AC073069.1-201ENST00000428657 441 ntBASIC4.88□□□□□ -1.63
CTHRC1Q96CG8 GAPDHP58-201ENST00000438477 1006 ntBASIC4.88□□□□□ -1.63
CTHRC1Q96CG8 AC104306.1-201ENST00000449702 371 ntBASIC4.88□□□□□ -1.63
CTHRC1Q96CG8 BX842559.2-201ENST00000451418 605 ntBASIC4.88□□□□□ -1.63
CTHRC1Q96CG8 Z92846.1-201ENST00000456203 268 ntBASIC4.88□□□□□ -1.63
CTHRC1Q96CG8 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC4.88□□□□□ -1.63
CTHRC1Q96CG8 MTND1P16-201ENST00000465177 898 ntBASIC4.88□□□□□ -1.63
CTHRC1Q96CG8 RN7SL189P-201ENST00000468631 289 ntBASIC4.88□□□□□ -1.63
CTHRC1Q96CG8 RPL23AP71-201ENST00000470966 469 ntBASIC4.88□□□□□ -1.63
CTHRC1Q96CG8 RPL30P6-201ENST00000475925 342 ntBASIC4.88□□□□□ -1.63
CTHRC1Q96CG8 RN7SL727P-201ENST00000482164 296 ntBASIC4.88□□□□□ -1.63
CTHRC1Q96CG8 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC4.88□□□□□ -1.63
CTHRC1Q96CG8 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC4.88□□□□□ -1.63
CTHRC1Q96CG8 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC4.88□□□□□ -1.63
CTHRC1Q96CG8 RNU6-1225P-201ENST00000516336 65 ntBASIC4.88□□□□□ -1.63
CTHRC1Q96CG8 AC012400.1-201ENST00000518452 381 ntBASIC4.88□□□□□ -1.63
CTHRC1Q96CG8 NAP1L1P1-201ENST00000524793 1063 ntBASIC4.88□□□□□ -1.63
CTHRC1Q96CG8 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CTHRC1Q96CG8 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.88□□□□□ -1.63
CTHRC1Q96CG8 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4.88□□□□□ -1.63
CTHRC1Q96CG8 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC4.88□□□□□ -1.63
CTHRC1Q96CG8 AC127381.1-201ENST00000555979 939 ntBASIC4.88□□□□□ -1.63
CTHRC1Q96CG8 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC4.88□□□□□ -1.63
CTHRC1Q96CG8 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC4.88□□□□□ -1.63
CTHRC1Q96CG8 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.88□□□□□ -1.63
CTHRC1Q96CG8 AC009852.2-201ENST00000567898 485 ntBASIC4.88□□□□□ -1.63
CTHRC1Q96CG8 AC005951.1-201ENST00000576706 485 ntBASIC4.88□□□□□ -1.63
CTHRC1Q96CG8 MIR4675-201ENST00000577898 77 ntBASIC4.88□□□□□ -1.63
CTHRC1Q96CG8 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC4.88□□□□□ -1.63
CTHRC1Q96CG8 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC4.88□□□□□ -1.63
CTHRC1Q96CG8 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.88□□□□□ -1.63
CTHRC1Q96CG8 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
CTHRC1Q96CG8 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.88□□□□□ -1.63
CTHRC1Q96CG8 AC006272.2-201ENST00000594725 163 ntBASIC4.88□□□□□ -1.63
CTHRC1Q96CG8 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC4.88□□□□□ -1.63
CTHRC1Q96CG8 AC131235.4-201ENST00000609288 620 ntBASIC4.88□□□□□ -1.63
CTHRC1Q96CG8 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
CTHRC1Q96CG8 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC4.88□□□□□ -1.63
CTHRC1Q96CG8 AC118658.2-201ENST00000618697 459 ntBASIC4.88□□□□□ -1.63
CTHRC1Q96CG8 AC069209.1-201ENST00000619282 651 ntBASIC4.88□□□□□ -1.63
CTHRC1Q96CG8 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CTHRC1Q96CG8 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
CTHRC1Q96CG8 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC4.88□□□□□ -1.63
CTHRC1Q96CG8 WAC-209ENST00000428935 1320 ntTSL 2 BASIC4.88□□□□□ -1.63
CTHRC1Q96CG8 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CTHRC1Q96CG8 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CTHRC1Q96CG8 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
CTHRC1Q96CG8 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
CTHRC1Q96CG8 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CTHRC1Q96CG8 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CTHRC1Q96CG8 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
CTHRC1Q96CG8 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
CTHRC1Q96CG8 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
CTHRC1Q96CG8 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CTHRC1Q96CG8 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.87□□□□□ -1.63
CTHRC1Q96CG8 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CTHRC1Q96CG8 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CTHRC1Q96CG8 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC4.87□□□□□ -1.63
CTHRC1Q96CG8 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.87□□□□□ -1.63
CTHRC1Q96CG8 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
CTHRC1Q96CG8 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CTHRC1Q96CG8 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
CTHRC1Q96CG8 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CTHRC1Q96CG8 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
CTHRC1Q96CG8 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CTHRC1Q96CG8 RNU6-931P-201ENST00000363850 107 ntBASIC4.87□□□□□ -1.63
CTHRC1Q96CG8 RNU4-24P-201ENST00000364565 139 ntBASIC4.87□□□□□ -1.63
CTHRC1Q96CG8 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
CTHRC1Q96CG8 AL355379.1-201ENST00000405542 640 ntBASIC4.87□□□□□ -1.63
CTHRC1Q96CG8 MIR1182-201ENST00000408363 97 ntBASIC4.87□□□□□ -1.63
CTHRC1Q96CG8 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC4.87□□□□□ -1.63
CTHRC1Q96CG8 AL450992.3-201ENST00000413192 568 ntBASIC4.87□□□□□ -1.63
CTHRC1Q96CG8 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC4.87□□□□□ -1.63
CTHRC1Q96CG8 COX5BP7-201ENST00000414780 274 ntBASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms