Protein–RNA interactions for Protein: Q8WXD2

SCG3, Secretogranin-3, humanhuman

Known RBP Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3Q8WXD2 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
SCG3Q8WXD2 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
SCG3Q8WXD2 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC6.73□□□□□ -1.33
SCG3Q8WXD2 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC6.73□□□□□ -1.33
SCG3Q8WXD2 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC6.73□□□□□ -1.33
SCG3Q8WXD2 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.73□□□□□ -1.33
SCG3Q8WXD2 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.73□□□□□ -1.33
SCG3Q8WXD2 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
SCG3Q8WXD2 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
SCG3Q8WXD2 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
SCG3Q8WXD2 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
SCG3Q8WXD2 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
SCG3Q8WXD2 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
SCG3Q8WXD2 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
SCG3Q8WXD2 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
SCG3Q8WXD2 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
SCG3Q8WXD2 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
SCG3Q8WXD2 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
SCG3Q8WXD2 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
SCG3Q8WXD2 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
SCG3Q8WXD2 Y_RNA.431-201ENST00000384086 102 ntBASIC6.72□□□□□ -1.33
SCG3Q8WXD2 SNORA70.9-201ENST00000384370 135 ntBASIC6.72□□□□□ -1.33
SCG3Q8WXD2 SNORA11.5-201ENST00000408163 128 ntBASIC6.72□□□□□ -1.33
SCG3Q8WXD2 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC6.72□□□□□ -1.33
SCG3Q8WXD2 MTATP6P18-201ENST00000417994 673 ntBASIC6.72□□□□□ -1.33
SCG3Q8WXD2 OR10T1P-201ENST00000424327 947 ntBASIC6.72□□□□□ -1.33
SCG3Q8WXD2 MTCO2P12-201ENST00000427426 682 ntBASIC6.72□□□□□ -1.33
SCG3Q8WXD2 AL365400.1-201ENST00000431854 640 ntBASIC6.72□□□□□ -1.33
SCG3Q8WXD2 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC6.72□□□□□ -1.33
SCG3Q8WXD2 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC6.72□□□□□ -1.33
SCG3Q8WXD2 AL136380.1-201ENST00000447970 162 ntBASIC6.72□□□□□ -1.33
SCG3Q8WXD2 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
SCG3Q8WXD2 HMGN3P1-201ENST00000453847 193 ntBASIC6.72□□□□□ -1.33
SCG3Q8WXD2 SBDSP1-204ENST00000453858 737 ntBASIC6.72□□□□□ -1.33
SCG3Q8WXD2 AC099670.1-201ENST00000455141 783 ntBASIC6.72□□□□□ -1.33
SCG3Q8WXD2 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC6.72□□□□□ -1.33
SCG3Q8WXD2 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC6.72□□□□□ -1.33
SCG3Q8WXD2 RNU6-202P-201ENST00000515998 96 ntBASIC6.72□□□□□ -1.33
SCG3Q8WXD2 RNU6-835P-201ENST00000516974 104 ntBASIC6.72□□□□□ -1.33
SCG3Q8WXD2 RNU6-201P-201ENST00000517100 61 ntBASIC6.72□□□□□ -1.33
SCG3Q8WXD2 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC6.72□□□□□ -1.33
SCG3Q8WXD2 AC022690.1-201ENST00000526681 550 ntBASIC6.72□□□□□ -1.33
SCG3Q8WXD2 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC6.72□□□□□ -1.33
SCG3Q8WXD2 AC011611.1-201ENST00000552179 197 ntBASIC6.72□□□□□ -1.33
SCG3Q8WXD2 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC6.72□□□□□ -1.33
SCG3Q8WXD2 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC6.72□□□□□ -1.33
SCG3Q8WXD2 AC122134.1-201ENST00000565664 1104 ntBASIC6.72□□□□□ -1.33
SCG3Q8WXD2 AC091193.1-201ENST00000604640 448 ntBASIC6.72□□□□□ -1.33
SCG3Q8WXD2 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC6.72□□□□□ -1.33
SCG3Q8WXD2 MIR7854-201ENST00000620068 65 ntBASIC6.72□□□□□ -1.33
SCG3Q8WXD2 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC6.72□□□□□ -1.33
SCG3Q8WXD2 AC027559.1-201ENST00000636288 271 ntBASIC6.72□□□□□ -1.33
SCG3Q8WXD2 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
SCG3Q8WXD2 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
SCG3Q8WXD2 AP002907.1-201ENST00000606361 1430 ntBASIC6.72□□□□□ -1.33
SCG3Q8WXD2 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
SCG3Q8WXD2 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
SCG3Q8WXD2 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
SCG3Q8WXD2 USP9YP4-201ENST00000424401 1745 ntBASIC6.72□□□□□ -1.33
SCG3Q8WXD2 AC009120.2-204ENST00000621548 2032 ntBASIC6.72□□□□□ -1.33
SCG3Q8WXD2 ACTR3BP2-202ENST00000623630 1338 ntBASIC6.72□□□□□ -1.33
SCG3Q8WXD2 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
SCG3Q8WXD2 AC217777.1-201ENST00000570034 1471 ntBASIC6.72□□□□□ -1.33
SCG3Q8WXD2 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC6.71□□□□□ -1.33
SCG3Q8WXD2 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.33
SCG3Q8WXD2 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
SCG3Q8WXD2 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.33
SCG3Q8WXD2 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
SCG3Q8WXD2 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.33
SCG3Q8WXD2 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.71□□□□□ -1.33
SCG3Q8WXD2 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
SCG3Q8WXD2 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
SCG3Q8WXD2 LINC00622-201ENST00000562811 1570 ntBASIC6.71□□□□□ -1.34
SCG3Q8WXD2 AL121768.1-201ENST00000613917 2544 ntBASIC6.71□□□□□ -1.34
SCG3Q8WXD2 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC6.71□□□□□ -1.34
SCG3Q8WXD2 SNORA70H-201ENST00000383910 135 ntBASIC6.71□□□□□ -1.34
SCG3Q8WXD2 SNORA70J-201ENST00000384182 135 ntBASIC6.71□□□□□ -1.34
SCG3Q8WXD2 SNORA7A-201ENST00000384765 139 ntBASIC6.71□□□□□ -1.34
SCG3Q8WXD2 RNU6-952P-201ENST00000391164 108 ntBASIC6.71□□□□□ -1.34
SCG3Q8WXD2 UBBP1-201ENST00000392399 473 ntBASIC6.71□□□□□ -1.34
SCG3Q8WXD2 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.34
SCG3Q8WXD2 RPS4XP8-201ENST00000402039 771 ntBASIC6.71□□□□□ -1.34
SCG3Q8WXD2 SNRPFP1-201ENST00000414761 252 ntBASIC6.71□□□□□ -1.34
SCG3Q8WXD2 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC6.71□□□□□ -1.34
SCG3Q8WXD2 MRPL50P2-201ENST00000416821 482 ntBASIC6.71□□□□□ -1.34
SCG3Q8WXD2 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC6.71□□□□□ -1.34
SCG3Q8WXD2 AC010881.1-201ENST00000433830 235 ntBASIC6.71□□□□□ -1.34
SCG3Q8WXD2 RPS3AP38-201ENST00000435889 763 ntBASIC6.71□□□□□ -1.34
SCG3Q8WXD2 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC6.71□□□□□ -1.34
SCG3Q8WXD2 AC021660.1-201ENST00000465006 554 ntBASIC6.71□□□□□ -1.34
SCG3Q8WXD2 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
SCG3Q8WXD2 AC015524.1-201ENST00000491585 472 ntBASIC6.71□□□□□ -1.34
SCG3Q8WXD2 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC6.71□□□□□ -1.34
SCG3Q8WXD2 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC6.71□□□□□ -1.34
SCG3Q8WXD2 AC105029.1-201ENST00000520250 669 ntBASIC6.71□□□□□ -1.34
SCG3Q8WXD2 AP003080.1-202ENST00000526526 915 ntBASIC6.71□□□□□ -1.34
SCG3Q8WXD2 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC6.71□□□□□ -1.34
SCG3Q8WXD2 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC6.71□□□□□ -1.34
SCG3Q8WXD2 AL109766.1-201ENST00000555080 552 ntBASIC6.71□□□□□ -1.34
SCG3Q8WXD2 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC6.71□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms