Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 LYST-202ENST00000389794 12985 ntTSL 5 BASIC2.76□□□□□ -1.97
ALMS1Q8TCU4 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC2.76□□□□□ -1.97
ALMS1Q8TCU4 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC2.76□□□□□ -1.97
ALMS1Q8TCU4 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC2.76□□□□□ -1.97
ALMS1Q8TCU4 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC2.76□□□□□ -1.97
ALMS1Q8TCU4 PMCHL2-202ENST00000450213 1917 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
ALMS1Q8TCU4 BMS1P3-201ENST00000372011 932 ntBASIC2.75□□□□□ -1.97
ALMS1Q8TCU4 ATP5A1P2-201ENST00000412323 255 ntBASIC2.75□□□□□ -1.97
ALMS1Q8TCU4 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC2.75□□□□□ -1.97
ALMS1Q8TCU4 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC2.75□□□□□ -1.97
ALMS1Q8TCU4 RPL5P24-201ENST00000463742 885 ntBASIC2.75□□□□□ -1.97
ALMS1Q8TCU4 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC2.75□□□□□ -1.97
ALMS1Q8TCU4 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC2.75□□□□□ -1.97
ALMS1Q8TCU4 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
ALMS1Q8TCU4 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC2.75□□□□□ -1.97
ALMS1Q8TCU4 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC2.75□□□□□ -1.97
ALMS1Q8TCU4 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
ALMS1Q8TCU4 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
ALMS1Q8TCU4 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
ALMS1Q8TCU4 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC2.75□□□□□ -1.97
ALMS1Q8TCU4 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC2.75□□□□□ -1.97
ALMS1Q8TCU4 DDX39BP2-208ENST00000453923 258 ntBASIC2.75□□□□□ -1.97
ALMS1Q8TCU4 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC2.75□□□□□ -1.97
ALMS1Q8TCU4 LINC00901.1-201ENST00000617252 152 ntBASIC2.75□□□□□ -1.97
ALMS1Q8TCU4 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
ALMS1Q8TCU4 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
ALMS1Q8TCU4 MTCO1P12-201ENST00000414273 1543 ntBASIC2.75□□□□□ -1.97
ALMS1Q8TCU4 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
ALMS1Q8TCU4 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
ALMS1Q8TCU4 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
ALMS1Q8TCU4 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC2.75□□□□□ -1.97
ALMS1Q8TCU4 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC2.75□□□□□ -1.97
ALMS1Q8TCU4 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC2.75□□□□□ -1.97
ALMS1Q8TCU4 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC2.75□□□□□ -1.97
ALMS1Q8TCU4 ABBA01000935.2-201ENST00000637477 838 ntBASIC2.75□□□□□ -1.97
ALMS1Q8TCU4 AC012078.1-201ENST00000405035 1646 ntBASIC2.75□□□□□ -1.97
ALMS1Q8TCU4 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC2.75□□□□□ -1.97
ALMS1Q8TCU4 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
ALMS1Q8TCU4 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC2.75□□□□□ -1.97
ALMS1Q8TCU4 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC2.75□□□□□ -1.97
ALMS1Q8TCU4 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC2.75□□□□□ -1.97
ALMS1Q8TCU4 PHLPP2-201ENST00000393524 8467 ntTSL 2 BASIC2.75□□□□□ -1.97
ALMS1Q8TCU4 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC2.75□□□□□ -1.97
ALMS1Q8TCU4 RPS17P13-201ENST00000448974 407 ntBASIC2.75□□□□□ -1.97
ALMS1Q8TCU4 RPL36AP13-201ENST00000457490 317 ntBASIC2.75□□□□□ -1.97
ALMS1Q8TCU4 MTND6P6-201ENST00000478031 263 ntBASIC2.75□□□□□ -1.97
ALMS1Q8TCU4 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC2.75□□□□□ -1.97
ALMS1Q8TCU4 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
ALMS1Q8TCU4 AC007066.2-202ENST00000566531 914 ntBASIC2.75□□□□□ -1.97
ALMS1Q8TCU4 AL513477.2-201ENST00000607858 568 ntBASIC2.75□□□□□ -1.97
ALMS1Q8TCU4 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC2.75□□□□□ -1.97
ALMS1Q8TCU4 TEX41-256ENST00000626411 368 ntTSL 5 BASIC2.75□□□□□ -1.97
ALMS1Q8TCU4 OR6C71P-202ENST00000641886 1107 ntBASIC2.75□□□□□ -1.97
ALMS1Q8TCU4 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC2.75□□□□□ -1.97
ALMS1Q8TCU4 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC2.75□□□□□ -1.97
ALMS1Q8TCU4 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
ALMS1Q8TCU4 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
ALMS1Q8TCU4 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
ALMS1Q8TCU4 LINC01109-201ENST00000603837 3081 ntBASIC2.74□□□□□ -1.97
ALMS1Q8TCU4 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC2.74□□□□□ -1.97
ALMS1Q8TCU4 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC2.74□□□□□ -1.97
ALMS1Q8TCU4 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC2.74□□□□□ -1.97
ALMS1Q8TCU4 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC2.74□□□□□ -1.97
ALMS1Q8TCU4 RN7SKP199-201ENST00000410325 305 ntBASIC2.74□□□□□ -1.97
ALMS1Q8TCU4 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC2.74□□□□□ -1.97
ALMS1Q8TCU4 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC2.74□□□□□ -1.97
ALMS1Q8TCU4 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC2.74□□□□□ -1.97
ALMS1Q8TCU4 RNU1-30P-201ENST00000606575 163 ntBASIC2.74□□□□□ -1.97
ALMS1Q8TCU4 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
ALMS1Q8TCU4 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
ALMS1Q8TCU4 MTND4P26-201ENST00000415971 1359 ntBASIC2.74□□□□□ -1.97
ALMS1Q8TCU4 BTBD10P1-201ENST00000549824 1352 ntBASIC2.74□□□□□ -1.97
ALMS1Q8TCU4 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
ALMS1Q8TCU4 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC2.74□□□□□ -1.97
ALMS1Q8TCU4 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC2.74□□□□□ -1.97
ALMS1Q8TCU4 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
ALMS1Q8TCU4 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
ALMS1Q8TCU4 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC2.74□□□□□ -1.97
ALMS1Q8TCU4 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
ALMS1Q8TCU4 ESD-201ENST00000378697 1079 ntTSL 5 BASIC2.74□□□□□ -1.97
ALMS1Q8TCU4 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.74□□□□□ -1.97
ALMS1Q8TCU4 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC2.74□□□□□ -1.97
ALMS1Q8TCU4 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
ALMS1Q8TCU4 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC2.74□□□□□ -1.97
ALMS1Q8TCU4 RANP9-201ENST00000519957 271 ntBASIC2.74□□□□□ -1.97
ALMS1Q8TCU4 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC2.74□□□□□ -1.97
ALMS1Q8TCU4 AC079587.1-201ENST00000603846 277 ntBASIC2.74□□□□□ -1.97
ALMS1Q8TCU4 AL049634.3-201ENST00000604968 457 ntBASIC2.74□□□□□ -1.97
ALMS1Q8TCU4 AC140113.4-201ENST00000622087 222 ntBASIC2.74□□□□□ -1.97
ALMS1Q8TCU4 CCT7-217ENST00000626868 249 ntTSL 5 BASIC2.74□□□□□ -1.97
ALMS1Q8TCU4 DDX18P4-201ENST00000511690 1966 ntBASIC2.74□□□□□ -1.97
ALMS1Q8TCU4 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
ALMS1Q8TCU4 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
ALMS1Q8TCU4 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
ALMS1Q8TCU4 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
ALMS1Q8TCU4 Y_RNA.500-201ENST00000384466 111 ntBASIC2.74□□□□□ -1.97
ALMS1Q8TCU4 RPS7P15-201ENST00000415804 584 ntBASIC2.74□□□□□ -1.97
ALMS1Q8TCU4 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
ALMS1Q8TCU4 FCF1P7-201ENST00000451185 558 ntBASIC2.74□□□□□ -1.97
ALMS1Q8TCU4 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms