Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 AC244035.1-201ENST00000430042 390 ntBASIC5.32□□□□□ -1.56
SLC44A3Q8N4M1 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC5.32□□□□□ -1.56
SLC44A3Q8N4M1 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC5.32□□□□□ -1.56
SLC44A3Q8N4M1 NMNAT1P2-201ENST00000435192 860 ntBASIC5.32□□□□□ -1.56
SLC44A3Q8N4M1 YWHAZP7-201ENST00000436906 631 ntBASIC5.32□□□□□ -1.56
SLC44A3Q8N4M1 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
SLC44A3Q8N4M1 TPTE2P6-202ENST00000445572 1007 ntBASIC5.32□□□□□ -1.56
SLC44A3Q8N4M1 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC5.32□□□□□ -1.56
SLC44A3Q8N4M1 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC5.32□□□□□ -1.56
SLC44A3Q8N4M1 RPL7P32-201ENST00000457119 744 ntBASIC5.32□□□□□ -1.56
SLC44A3Q8N4M1 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC5.32□□□□□ -1.56
SLC44A3Q8N4M1 RPS20P4-201ENST00000461659 355 ntBASIC5.32□□□□□ -1.56
SLC44A3Q8N4M1 PSAT1P4-201ENST00000466500 526 ntBASIC5.32□□□□□ -1.56
SLC44A3Q8N4M1 SYPL1P1-201ENST00000473622 768 ntBASIC5.32□□□□□ -1.56
SLC44A3Q8N4M1 AC069528.1-202ENST00000482888 637 ntBASIC5.32□□□□□ -1.56
SLC44A3Q8N4M1 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SLC44A3Q8N4M1 AC008565.1-201ENST00000509046 885 ntBASIC5.32□□□□□ -1.56
SLC44A3Q8N4M1 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC5.32□□□□□ -1.56
SLC44A3Q8N4M1 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC5.32□□□□□ -1.56
SLC44A3Q8N4M1 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC5.32□□□□□ -1.56
SLC44A3Q8N4M1 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC5.32□□□□□ -1.56
SLC44A3Q8N4M1 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.32□□□□□ -1.56
SLC44A3Q8N4M1 NBEAP1-201ENST00000554452 979 ntBASIC5.32□□□□□ -1.56
SLC44A3Q8N4M1 DUXAP1-201ENST00000556632 463 ntBASIC5.32□□□□□ -1.56
SLC44A3Q8N4M1 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.32□□□□□ -1.56
SLC44A3Q8N4M1 ACTR3BP3-201ENST00000565577 979 ntBASIC5.32□□□□□ -1.56
SLC44A3Q8N4M1 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC5.32□□□□□ -1.56
SLC44A3Q8N4M1 AC091042.1-201ENST00000579213 173 ntBASIC5.32□□□□□ -1.56
SLC44A3Q8N4M1 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC5.32□□□□□ -1.56
SLC44A3Q8N4M1 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC5.32□□□□□ -1.56
SLC44A3Q8N4M1 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SLC44A3Q8N4M1 AL162431.4-201ENST00000604674 411 ntBASIC5.32□□□□□ -1.56
SLC44A3Q8N4M1 AL392112.1-201ENST00000605115 829 ntBASIC5.32□□□□□ -1.56
SLC44A3Q8N4M1 AC092653.1-201ENST00000608509 531 ntBASIC5.32□□□□□ -1.56
SLC44A3Q8N4M1 AC122133.1-201ENST00000613964 233 ntBASIC5.32□□□□□ -1.56
SLC44A3Q8N4M1 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.32□□□□□ -1.56
SLC44A3Q8N4M1 MIR6758-201ENST00000620653 63 ntBASIC5.32□□□□□ -1.56
SLC44A3Q8N4M1 AC091931.1-201ENST00000623488 728 ntBASIC5.32□□□□□ -1.56
SLC44A3Q8N4M1 AL359740.1-201ENST00000624340 592 ntBASIC5.32□□□□□ -1.56
SLC44A3Q8N4M1 AC016717.3-201ENST00000624730 554 ntBASIC5.32□□□□□ -1.56
SLC44A3Q8N4M1 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SLC44A3Q8N4M1 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SLC44A3Q8N4M1 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
SLC44A3Q8N4M1 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SLC44A3Q8N4M1 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SLC44A3Q8N4M1 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC5.32□□□□□ -1.56
SLC44A3Q8N4M1 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SLC44A3Q8N4M1 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.32□□□□□ -1.56
SLC44A3Q8N4M1 AL031595.2-201ENST00000624215 19071 ntBASIC5.31□□□□□ -1.56
SLC44A3Q8N4M1 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
SLC44A3Q8N4M1 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SLC44A3Q8N4M1 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.31□□□□□ -1.56
SLC44A3Q8N4M1 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SLC44A3Q8N4M1 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SLC44A3Q8N4M1 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SLC44A3Q8N4M1 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SLC44A3Q8N4M1 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SLC44A3Q8N4M1 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
SLC44A3Q8N4M1 RNU6-413P-201ENST00000384115 107 ntBASIC5.31□□□□□ -1.56
SLC44A3Q8N4M1 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SLC44A3Q8N4M1 AC010385.1-201ENST00000412374 256 ntBASIC5.31□□□□□ -1.56
SLC44A3Q8N4M1 AC027644.1-201ENST00000419595 298 ntBASIC5.31□□□□□ -1.56
SLC44A3Q8N4M1 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC5.31□□□□□ -1.56
SLC44A3Q8N4M1 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SLC44A3Q8N4M1 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC5.31□□□□□ -1.56
SLC44A3Q8N4M1 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.31□□□□□ -1.56
SLC44A3Q8N4M1 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC5.31□□□□□ -1.56
SLC44A3Q8N4M1 MTND2P20-201ENST00000440805 661 ntBASIC5.31□□□□□ -1.56
SLC44A3Q8N4M1 AL157827.1-201ENST00000447622 132 ntBASIC5.31□□□□□ -1.56
SLC44A3Q8N4M1 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.31□□□□□ -1.56
SLC44A3Q8N4M1 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
SLC44A3Q8N4M1 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC5.31□□□□□ -1.56
SLC44A3Q8N4M1 GAPDHP56-201ENST00000506031 988 ntBASIC5.31□□□□□ -1.56
SLC44A3Q8N4M1 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC5.31□□□□□ -1.56
SLC44A3Q8N4M1 SCARNA20.4-201ENST00000516969 131 ntBASIC5.31□□□□□ -1.56
SLC44A3Q8N4M1 MTCYBP19-201ENST00000517463 1124 ntBASIC5.31□□□□□ -1.56
SLC44A3Q8N4M1 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.31□□□□□ -1.56
SLC44A3Q8N4M1 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.31□□□□□ -1.56
SLC44A3Q8N4M1 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.31□□□□□ -1.56
SLC44A3Q8N4M1 AC010198.2-201ENST00000550612 259 ntBASIC5.31□□□□□ -1.56
SLC44A3Q8N4M1 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.31□□□□□ -1.56
SLC44A3Q8N4M1 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.31□□□□□ -1.56
SLC44A3Q8N4M1 MIR3667-201ENST00000581025 74 ntBASIC5.31□□□□□ -1.56
SLC44A3Q8N4M1 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC5.31□□□□□ -1.56
SLC44A3Q8N4M1 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.31□□□□□ -1.56
SLC44A3Q8N4M1 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SLC44A3Q8N4M1 AC105254.2-201ENST00000603636 436 ntBASIC5.31□□□□□ -1.56
SLC44A3Q8N4M1 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SLC44A3Q8N4M1 RN7SKP299-201ENST00000606679 301 ntBASIC5.31□□□□□ -1.56
SLC44A3Q8N4M1 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC5.31□□□□□ -1.56
SLC44A3Q8N4M1 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.31□□□□□ -1.56
SLC44A3Q8N4M1 AP000254.1-201ENST00000609934 520 ntBASIC5.31□□□□□ -1.56
SLC44A3Q8N4M1 AC244107.2-201ENST00000611773 76 ntBASIC5.31□□□□□ -1.56
SLC44A3Q8N4M1 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.31□□□□□ -1.56
SLC44A3Q8N4M1 AC092656.1-203ENST00000624134 423 ntBASIC5.31□□□□□ -1.56
SLC44A3Q8N4M1 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC5.31□□□□□ -1.56
SLC44A3Q8N4M1 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SLC44A3Q8N4M1 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC5.31□□□□□ -1.56
SLC44A3Q8N4M1 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SLC44A3Q8N4M1 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 129.8 ms