Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 VN1R25P-201ENST00000443385 738 ntBASIC4.55□□□□□ -1.68
BEST3Q8N1M1 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.55□□□□□ -1.68
BEST3Q8N1M1 ELOCP13-201ENST00000443934 329 ntBASIC4.55□□□□□ -1.68
BEST3Q8N1M1 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC4.55□□□□□ -1.68
BEST3Q8N1M1 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.55□□□□□ -1.68
BEST3Q8N1M1 H2AFZP6-201ENST00000444403 394 ntBASIC4.55□□□□□ -1.68
BEST3Q8N1M1 CASP3P1-201ENST00000446037 609 ntBASIC4.55□□□□□ -1.68
BEST3Q8N1M1 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.55□□□□□ -1.68
BEST3Q8N1M1 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.55□□□□□ -1.68
BEST3Q8N1M1 OR1H1P-201ENST00000448731 937 ntBASIC4.55□□□□□ -1.68
BEST3Q8N1M1 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.55□□□□□ -1.68
BEST3Q8N1M1 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC4.55□□□□□ -1.68
BEST3Q8N1M1 OFD1P7Y-201ENST00000454643 1155 ntBASIC4.55□□□□□ -1.68
BEST3Q8N1M1 AC092155.2-201ENST00000454675 477 ntBASIC4.55□□□□□ -1.68
BEST3Q8N1M1 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.55□□□□□ -1.68
BEST3Q8N1M1 RNU7-140P-201ENST00000459546 60 ntBASIC4.55□□□□□ -1.68
BEST3Q8N1M1 RN7SL346P-201ENST00000491561 294 ntBASIC4.55□□□□□ -1.68
BEST3Q8N1M1 AC008897.1-201ENST00000494006 347 ntBASIC4.55□□□□□ -1.68
BEST3Q8N1M1 NIFKP7-201ENST00000503365 834 ntBASIC4.55□□□□□ -1.68
BEST3Q8N1M1 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
BEST3Q8N1M1 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC4.55□□□□□ -1.68
BEST3Q8N1M1 RNU6-311P-201ENST00000516224 102 ntBASIC4.55□□□□□ -1.68
BEST3Q8N1M1 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC4.55□□□□□ -1.68
BEST3Q8N1M1 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC4.55□□□□□ -1.68
BEST3Q8N1M1 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC4.55□□□□□ -1.68
BEST3Q8N1M1 AC124293.1-201ENST00000530034 493 ntBASIC4.55□□□□□ -1.68
BEST3Q8N1M1 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
BEST3Q8N1M1 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.55□□□□□ -1.68
BEST3Q8N1M1 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.55□□□□□ -1.68
BEST3Q8N1M1 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.55□□□□□ -1.68
BEST3Q8N1M1 CSNK1A1P1-202ENST00000563423 981 ntBASIC4.55□□□□□ -1.68
BEST3Q8N1M1 AC091042.1-201ENST00000579213 173 ntBASIC4.55□□□□□ -1.68
BEST3Q8N1M1 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC4.55□□□□□ -1.68
BEST3Q8N1M1 AC018695.5-201ENST00000605872 315 ntBASIC4.55□□□□□ -1.68
BEST3Q8N1M1 VN1R74P-201ENST00000613259 503 ntBASIC4.55□□□□□ -1.68
BEST3Q8N1M1 uc_338.18-201ENST00000615451 175 ntBASIC4.55□□□□□ -1.68
BEST3Q8N1M1 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.55□□□□□ -1.68
BEST3Q8N1M1 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
BEST3Q8N1M1 AL356863.1-201ENST00000623378 1080 ntBASIC4.55□□□□□ -1.68
BEST3Q8N1M1 AC006963.1-201ENST00000624003 1052 ntBASIC4.55□□□□□ -1.68
BEST3Q8N1M1 AP000648.2-201ENST00000624182 404 ntBASIC4.55□□□□□ -1.68
BEST3Q8N1M1 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.55□□□□□ -1.68
BEST3Q8N1M1 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC4.55□□□□□ -1.68
BEST3Q8N1M1 BX649567.1-201ENST00000642071 1134 ntBASIC4.55□□□□□ -1.68
BEST3Q8N1M1 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
BEST3Q8N1M1 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
BEST3Q8N1M1 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
BEST3Q8N1M1 AC093775.1-201ENST00000624154 1868 ntBASIC4.55□□□□□ -1.68
BEST3Q8N1M1 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
BEST3Q8N1M1 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
BEST3Q8N1M1 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
BEST3Q8N1M1 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.55□□□□□ -1.68
BEST3Q8N1M1 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.55□□□□□ -1.68
BEST3Q8N1M1 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.54□□□□□ -1.68
BEST3Q8N1M1 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
BEST3Q8N1M1 AC096656.1-201ENST00000623826 1364 ntBASIC4.54□□□□□ -1.68
BEST3Q8N1M1 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
BEST3Q8N1M1 SEPT7P7-201ENST00000420492 1301 ntBASIC4.54□□□□□ -1.68
BEST3Q8N1M1 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.54□□□□□ -1.68
BEST3Q8N1M1 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
BEST3Q8N1M1 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
BEST3Q8N1M1 AC063976.2-201ENST00000425667 3556 ntBASIC4.54□□□□□ -1.68
BEST3Q8N1M1 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
BEST3Q8N1M1 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
BEST3Q8N1M1 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
BEST3Q8N1M1 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
BEST3Q8N1M1 UBBP2-201ENST00000376781 231 ntBASIC4.54□□□□□ -1.68
BEST3Q8N1M1 RNU6-224P-201ENST00000384055 107 ntBASIC4.54□□□□□ -1.68
BEST3Q8N1M1 RNU6-906P-201ENST00000384700 70 ntBASIC4.54□□□□□ -1.68
BEST3Q8N1M1 LRRC37BP1-201ENST00000398851 714 ntBASIC4.54□□□□□ -1.68
BEST3Q8N1M1 U3.32-201ENST00000408116 212 ntBASIC4.54□□□□□ -1.68
BEST3Q8N1M1 MIR1303-201ENST00000408625 86 ntBASIC4.54□□□□□ -1.68
BEST3Q8N1M1 RNA5SP296-201ENST00000410523 111 ntBASIC4.54□□□□□ -1.68
BEST3Q8N1M1 SSR1P2-201ENST00000415208 787 ntBASIC4.54□□□□□ -1.68
BEST3Q8N1M1 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.54□□□□□ -1.68
BEST3Q8N1M1 TRGV6-201ENST00000417928 299 ntBASIC4.54□□□□□ -1.68
BEST3Q8N1M1 OR2AH1P-201ENST00000425717 928 ntBASIC4.54□□□□□ -1.68
BEST3Q8N1M1 OR5AW1P-201ENST00000426334 1006 ntBASIC4.54□□□□□ -1.68
BEST3Q8N1M1 AL450023.3-201ENST00000440592 271 ntBASIC4.54□□□□□ -1.68
BEST3Q8N1M1 AC009263.1-201ENST00000441193 1239 ntBASIC4.54□□□□□ -1.68
BEST3Q8N1M1 TPTE2P3-201ENST00000441562 1189 ntBASIC4.54□□□□□ -1.68
BEST3Q8N1M1 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.54□□□□□ -1.68
BEST3Q8N1M1 CEACAMP9-201ENST00000442990 513 ntBASIC4.54□□□□□ -1.68
BEST3Q8N1M1 AC005002.1-201ENST00000447458 540 ntBASIC4.54□□□□□ -1.68
BEST3Q8N1M1 AC010733.1-201ENST00000451515 401 ntBASIC4.54□□□□□ -1.68
BEST3Q8N1M1 AC234781.3-201ENST00000452540 973 ntBASIC4.54□□□□□ -1.68
BEST3Q8N1M1 AL691482.1-201ENST00000453255 87 ntBASIC4.54□□□□□ -1.68
BEST3Q8N1M1 RPS29P33-201ENST00000456717 146 ntBASIC4.54□□□□□ -1.68
BEST3Q8N1M1 RN7SL738P-201ENST00000470264 297 ntBASIC4.54□□□□□ -1.68
BEST3Q8N1M1 AC134050.1-201ENST00000495088 933 ntBASIC4.54□□□□□ -1.68
BEST3Q8N1M1 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC4.54□□□□□ -1.68
BEST3Q8N1M1 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC4.54□□□□□ -1.68
BEST3Q8N1M1 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.54□□□□□ -1.68
BEST3Q8N1M1 snoU109.6-201ENST00000516831 118 ntBASIC4.54□□□□□ -1.68
BEST3Q8N1M1 Y_RNA.717-201ENST00000517106 92 ntBASIC4.54□□□□□ -1.68
BEST3Q8N1M1 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC4.54□□□□□ -1.68
BEST3Q8N1M1 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC4.54□□□□□ -1.68
BEST3Q8N1M1 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.54□□□□□ -1.68
BEST3Q8N1M1 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.54□□□□□ -1.68
BEST3Q8N1M1 EEF1A1P37-201ENST00000522748 715 ntBASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 124.6 ms