Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CSMD3Q7Z407 ESD-201ENST00000378697 1079 ntTSL 5 BASIC2.73□□□□□ -1.97
CSMD3Q7Z407 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC2.73□□□□□ -1.97
CSMD3Q7Z407 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC2.73□□□□□ -1.97
CSMD3Q7Z407 RN7SL271P-201ENST00000487601 295 ntBASIC2.73□□□□□ -1.97
CSMD3Q7Z407 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC2.73□□□□□ -1.97
CSMD3Q7Z407 Y_RNA.673-201ENST00000516306 88 ntBASIC2.73□□□□□ -1.97
CSMD3Q7Z407 Vault.1-201ENST00000516474 102 ntBASIC2.73□□□□□ -1.97
CSMD3Q7Z407 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC2.73□□□□□ -1.97
CSMD3Q7Z407 AC012493.2-201ENST00000595083 291 ntBASIC2.73□□□□□ -1.97
CSMD3Q7Z407 CR392039.4-201ENST00000624968 501 ntBASIC2.73□□□□□ -1.97
CSMD3Q7Z407 AP001153.1-201ENST00000641024 338 ntBASIC2.73□□□□□ -1.97
CSMD3Q7Z407 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC2.73□□□□□ -1.97
CSMD3Q7Z407 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CSMD3Q7Z407 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
CSMD3Q7Z407 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC2.73□□□□□ -1.97
CSMD3Q7Z407 LDHAL6CP-202ENST00000550738 3224 ntBASIC2.73□□□□□ -1.97
CSMD3Q7Z407 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CSMD3Q7Z407 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC2.73□□□□□ -1.97
CSMD3Q7Z407 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC2.73□□□□□ -1.97
CSMD3Q7Z407 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC2.73□□□□□ -1.97
CSMD3Q7Z407 AP000641.1-201ENST00000531988 1639 ntBASIC2.73□□□□□ -1.97
CSMD3Q7Z407 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
CSMD3Q7Z407 SNORA5.1-201ENST00000384275 131 ntBASIC2.73□□□□□ -1.97
CSMD3Q7Z407 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC2.73□□□□□ -1.97
CSMD3Q7Z407 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC2.73□□□□□ -1.97
CSMD3Q7Z407 PTP4A1P3-201ENST00000433661 420 ntBASIC2.73□□□□□ -1.97
CSMD3Q7Z407 MRPL35P4-201ENST00000453682 566 ntBASIC2.73□□□□□ -1.97
CSMD3Q7Z407 DDX39BP2-208ENST00000453923 258 ntBASIC2.73□□□□□ -1.97
CSMD3Q7Z407 AC104619.4-201ENST00000510773 249 ntBASIC2.73□□□□□ -1.97
CSMD3Q7Z407 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC2.73□□□□□ -1.97
CSMD3Q7Z407 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC2.73□□□□□ -1.97
CSMD3Q7Z407 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC2.73□□□□□ -1.97
CSMD3Q7Z407 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC2.73□□□□□ -1.97
CSMD3Q7Z407 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC2.73□□□□□ -1.97
CSMD3Q7Z407 AC110801.1-201ENST00000623590 212 ntBASIC2.73□□□□□ -1.97
CSMD3Q7Z407 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CSMD3Q7Z407 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
CSMD3Q7Z407 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CSMD3Q7Z407 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC2.73□□□□□ -1.97
CSMD3Q7Z407 LINC01109-201ENST00000603837 3081 ntBASIC2.73□□□□□ -1.97
CSMD3Q7Z407 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CSMD3Q7Z407 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC2.73□□□□□ -1.97
CSMD3Q7Z407 CEP170P1-201ENST00000502249 4587 ntBASIC2.73□□□□□ -1.97
CSMD3Q7Z407 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.72□□□□□ -1.97
CSMD3Q7Z407 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
CSMD3Q7Z407 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
CSMD3Q7Z407 MIR1179-201ENST00000408703 91 ntBASIC2.72□□□□□ -1.97
CSMD3Q7Z407 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC2.72□□□□□ -1.97
CSMD3Q7Z407 RPS3AP46-201ENST00000448352 682 ntBASIC2.72□□□□□ -1.97
CSMD3Q7Z407 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC2.72□□□□□ -1.97
CSMD3Q7Z407 RPS4XP18-201ENST00000495480 763 ntBASIC2.72□□□□□ -1.97
CSMD3Q7Z407 AL352979.3-201ENST00000553515 247 ntBASIC2.72□□□□□ -1.97
CSMD3Q7Z407 MIR5680-201ENST00000577577 84 ntBASIC2.72□□□□□ -1.97
CSMD3Q7Z407 AC016229.2-201ENST00000591331 417 ntTSL 2 BASIC2.72□□□□□ -1.97
CSMD3Q7Z407 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC2.72□□□□□ -1.97
CSMD3Q7Z407 AC006077.1-201ENST00000604746 343 ntBASIC2.72□□□□□ -1.97
CSMD3Q7Z407 BNIP3P10-201ENST00000605360 577 ntBASIC2.72□□□□□ -1.97
CSMD3Q7Z407 MIR7112-201ENST00000616126 65 ntBASIC2.72□□□□□ -1.97
CSMD3Q7Z407 RBM23-203ENST00000359890 10040 ntAPPRIS P4 TSL 1 (best) BASIC2.72□□□□□ -1.97
CSMD3Q7Z407 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC2.72□□□□□ -1.97
CSMD3Q7Z407 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
CSMD3Q7Z407 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
CSMD3Q7Z407 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
CSMD3Q7Z407 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
CSMD3Q7Z407 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
CSMD3Q7Z407 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
CSMD3Q7Z407 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
CSMD3Q7Z407 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
CSMD3Q7Z407 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC2.72□□□□□ -1.97
CSMD3Q7Z407 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC2.72□□□□□ -1.97
CSMD3Q7Z407 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC2.72□□□□□ -1.97
CSMD3Q7Z407 AC092641.1-201ENST00000440229 772 ntBASIC2.72□□□□□ -1.97
CSMD3Q7Z407 RPL38P1-201ENST00000460914 211 ntBASIC2.72□□□□□ -1.97
CSMD3Q7Z407 RN7SL807P-201ENST00000470923 297 ntBASIC2.72□□□□□ -1.97
CSMD3Q7Z407 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC2.72□□□□□ -1.97
CSMD3Q7Z407 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC2.72□□□□□ -1.97
CSMD3Q7Z407 SNX6P1-201ENST00000601728 1224 ntBASIC2.72□□□□□ -1.97
CSMD3Q7Z407 AC008833.1-201ENST00000611633 691 ntBASIC2.72□□□□□ -1.97
CSMD3Q7Z407 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
CSMD3Q7Z407 SCN9A-202ENST00000409435 5967 ntAPPRIS ALT1 TSL 5 BASIC2.72□□□□□ -1.97
CSMD3Q7Z407 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC2.72□□□□□ -1.97
CSMD3Q7Z407 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC2.72□□□□□ -1.97
CSMD3Q7Z407 AC011755.1-201ENST00000623763 2049 ntBASIC2.72□□□□□ -1.97
CSMD3Q7Z407 AC092111.2-201ENST00000611627 1414 ntBASIC2.72□□□□□ -1.97
CSMD3Q7Z407 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC2.72□□□□□ -1.97
CSMD3Q7Z407 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
CSMD3Q7Z407 MIR133A2-201ENST00000347538 102 ntBASIC2.72□□□□□ -1.97
CSMD3Q7Z407 HSFY4P-201ENST00000415994 1181 ntBASIC2.72□□□□□ -1.97
CSMD3Q7Z407 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC2.72□□□□□ -1.97
CSMD3Q7Z407 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC2.72□□□□□ -1.97
CSMD3Q7Z407 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC2.72□□□□□ -1.97
CSMD3Q7Z407 PDSS1P2-201ENST00000449397 678 ntBASIC2.72□□□□□ -1.97
CSMD3Q7Z407 RPS4XP12-201ENST00000461747 709 ntBASIC2.72□□□□□ -1.97
CSMD3Q7Z407 AL133162.1-201ENST00000463228 453 ntBASIC2.72□□□□□ -1.97
CSMD3Q7Z407 AC025518.1-201ENST00000479856 347 ntBASIC2.72□□□□□ -1.97
CSMD3Q7Z407 RN7SL809P-201ENST00000482040 297 ntBASIC2.72□□□□□ -1.97
CSMD3Q7Z407 AC096576.1-201ENST00000489014 359 ntBASIC2.72□□□□□ -1.97
CSMD3Q7Z407 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
CSMD3Q7Z407 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms