Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.53□□□□□ -1.68
NUP54Q7Z3B4 SNORA58B-201ENST00000364259 136 ntBASIC4.53□□□□□ -1.68
NUP54Q7Z3B4 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC4.53□□□□□ -1.68
NUP54Q7Z3B4 GLULP6-201ENST00000399502 913 ntBASIC4.53□□□□□ -1.68
NUP54Q7Z3B4 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
NUP54Q7Z3B4 AL024507.1-201ENST00000412741 274 ntBASIC4.53□□□□□ -1.68
NUP54Q7Z3B4 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC4.53□□□□□ -1.68
NUP54Q7Z3B4 RPL31P45-201ENST00000419532 356 ntBASIC4.53□□□□□ -1.68
NUP54Q7Z3B4 OR2AM1P-201ENST00000422137 422 ntBASIC4.53□□□□□ -1.68
NUP54Q7Z3B4 AC013262.1-201ENST00000426710 252 ntBASIC4.53□□□□□ -1.68
NUP54Q7Z3B4 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC4.53□□□□□ -1.68
NUP54Q7Z3B4 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC4.53□□□□□ -1.68
NUP54Q7Z3B4 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC4.53□□□□□ -1.68
NUP54Q7Z3B4 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.53□□□□□ -1.68
NUP54Q7Z3B4 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.53□□□□□ -1.68
NUP54Q7Z3B4 AC073648.4-201ENST00000442655 781 ntBASIC4.53□□□□□ -1.68
NUP54Q7Z3B4 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC4.53□□□□□ -1.68
NUP54Q7Z3B4 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
NUP54Q7Z3B4 AC044797.1-201ENST00000445744 679 ntBASIC4.53□□□□□ -1.68
NUP54Q7Z3B4 YWHAQP9-201ENST00000445891 512 ntBASIC4.53□□□□□ -1.68
NUP54Q7Z3B4 GXYLT1P1-201ENST00000446657 490 ntBASIC4.53□□□□□ -1.68
NUP54Q7Z3B4 SLC25A18P1-201ENST00000449385 454 ntBASIC4.53□□□□□ -1.68
NUP54Q7Z3B4 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.53□□□□□ -1.68
NUP54Q7Z3B4 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC4.53□□□□□ -1.68
NUP54Q7Z3B4 RPS17P11-201ENST00000474297 293 ntBASIC4.53□□□□□ -1.68
NUP54Q7Z3B4 TRBV8-2-201ENST00000475637 270 ntBASIC4.53□□□□□ -1.68
NUP54Q7Z3B4 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC4.53□□□□□ -1.68
NUP54Q7Z3B4 MRPS33P2-201ENST00000507850 322 ntBASIC4.53□□□□□ -1.68
NUP54Q7Z3B4 HMGB3P16-201ENST00000508037 287 ntBASIC4.53□□□□□ -1.68
NUP54Q7Z3B4 AC110792.2-201ENST00000510278 224 ntBASIC4.53□□□□□ -1.68
NUP54Q7Z3B4 AC005351.1-201ENST00000511152 786 ntBASIC4.53□□□□□ -1.68
NUP54Q7Z3B4 AC110775.1-201ENST00000513721 462 ntBASIC4.53□□□□□ -1.68
NUP54Q7Z3B4 UBE2Q2P10-201ENST00000514854 900 ntBASIC4.53□□□□□ -1.68
NUP54Q7Z3B4 AC010476.1-201ENST00000519111 851 ntBASIC4.53□□□□□ -1.68
NUP54Q7Z3B4 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.53□□□□□ -1.68
NUP54Q7Z3B4 AP001922.4-201ENST00000526967 290 ntBASIC4.53□□□□□ -1.68
NUP54Q7Z3B4 PTP4A1P6-201ENST00000531034 478 ntBASIC4.53□□□□□ -1.68
NUP54Q7Z3B4 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC4.53□□□□□ -1.68
NUP54Q7Z3B4 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
NUP54Q7Z3B4 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.53□□□□□ -1.68
NUP54Q7Z3B4 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC4.53□□□□□ -1.68
NUP54Q7Z3B4 AC027455.1-201ENST00000574104 594 ntBASIC4.53□□□□□ -1.68
NUP54Q7Z3B4 AC090312.2-201ENST00000582687 378 ntBASIC4.53□□□□□ -1.68
NUP54Q7Z3B4 RN7SL435P-201ENST00000584418 282 ntBASIC4.53□□□□□ -1.68
NUP54Q7Z3B4 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.53□□□□□ -1.68
NUP54Q7Z3B4 AC083899.3-201ENST00000603413 594 ntBASIC4.53□□□□□ -1.68
NUP54Q7Z3B4 AC069304.3-201ENST00000603938 1084 ntBASIC4.53□□□□□ -1.68
NUP54Q7Z3B4 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC4.53□□□□□ -1.68
NUP54Q7Z3B4 MIR6864-201ENST00000617935 70 ntBASIC4.53□□□□□ -1.68
NUP54Q7Z3B4 AP003476.1-201ENST00000623984 516 ntBASIC4.53□□□□□ -1.68
NUP54Q7Z3B4 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC4.53□□□□□ -1.68
NUP54Q7Z3B4 CR381572.2-201ENST00000624852 397 ntBASIC4.53□□□□□ -1.68
NUP54Q7Z3B4 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.53□□□□□ -1.68
NUP54Q7Z3B4 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
NUP54Q7Z3B4 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
NUP54Q7Z3B4 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
NUP54Q7Z3B4 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
NUP54Q7Z3B4 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
NUP54Q7Z3B4 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
NUP54Q7Z3B4 AL731566.1-201ENST00000620490 1937 ntBASIC4.52□□□□□ -1.69
NUP54Q7Z3B4 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
NUP54Q7Z3B4 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
NUP54Q7Z3B4 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
NUP54Q7Z3B4 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
NUP54Q7Z3B4 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
NUP54Q7Z3B4 RN7SKP149-201ENST00000363008 344 ntBASIC4.52□□□□□ -1.69
NUP54Q7Z3B4 RN7SKP44-201ENST00000363602 316 ntBASIC4.52□□□□□ -1.69
NUP54Q7Z3B4 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.52□□□□□ -1.69
NUP54Q7Z3B4 MIR620-201ENST00000385232 95 ntBASIC4.52□□□□□ -1.69
NUP54Q7Z3B4 RPS24P12-201ENST00000402084 394 ntBASIC4.52□□□□□ -1.69
NUP54Q7Z3B4 AL355615.1-201ENST00000406187 641 ntBASIC4.52□□□□□ -1.69
NUP54Q7Z3B4 MTATP6P31-201ENST00000406985 692 ntBASIC4.52□□□□□ -1.69
NUP54Q7Z3B4 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.52□□□□□ -1.69
NUP54Q7Z3B4 STAT4-203ENST00000409995 709 ntTSL 5 BASIC4.52□□□□□ -1.69
NUP54Q7Z3B4 RNU2-6P-201ENST00000411404 190 ntBASIC4.52□□□□□ -1.69
NUP54Q7Z3B4 GTF2IP5-201ENST00000414608 731 ntBASIC4.52□□□□□ -1.69
NUP54Q7Z3B4 COX6B1P1-201ENST00000415962 213 ntBASIC4.52□□□□□ -1.69
NUP54Q7Z3B4 RPS12P23-201ENST00000419579 400 ntBASIC4.52□□□□□ -1.69
NUP54Q7Z3B4 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC4.52□□□□□ -1.69
NUP54Q7Z3B4 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC4.52□□□□□ -1.69
NUP54Q7Z3B4 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.52□□□□□ -1.69
NUP54Q7Z3B4 RPL12P3-201ENST00000440080 396 ntBASIC4.52□□□□□ -1.69
NUP54Q7Z3B4 AL031584.1-201ENST00000447169 754 ntBASIC4.52□□□□□ -1.69
NUP54Q7Z3B4 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.52□□□□□ -1.69
NUP54Q7Z3B4 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC4.52□□□□□ -1.69
NUP54Q7Z3B4 RPL7P61-201ENST00000451721 751 ntBASIC4.52□□□□□ -1.69
NUP54Q7Z3B4 HIGD1AP8-201ENST00000453927 274 ntBASIC4.52□□□□□ -1.69
NUP54Q7Z3B4 ATP5G1P3-201ENST00000463301 410 ntBASIC4.52□□□□□ -1.69
NUP54Q7Z3B4 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.52□□□□□ -1.69
NUP54Q7Z3B4 RN7SL826P-201ENST00000479724 288 ntBASIC4.52□□□□□ -1.69
NUP54Q7Z3B4 AC012170.1-201ENST00000495139 359 ntBASIC4.52□□□□□ -1.69
NUP54Q7Z3B4 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
NUP54Q7Z3B4 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC4.52□□□□□ -1.69
NUP54Q7Z3B4 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.52□□□□□ -1.69
NUP54Q7Z3B4 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC4.52□□□□□ -1.69
NUP54Q7Z3B4 MTATP6P9-201ENST00000515039 680 ntBASIC4.52□□□□□ -1.69
NUP54Q7Z3B4 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.52□□□□□ -1.69
NUP54Q7Z3B4 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC4.52□□□□□ -1.69
NUP54Q7Z3B4 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC4.52□□□□□ -1.69
NUP54Q7Z3B4 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms